Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lupinus_20angustifolius_20[refseq_20GCF_5F001865875.1_202016-11-16] 13,573 sequences; 609,203,021 total letters Query= NC_009127.1 Length=295146 Score E Sequences producing significant alignments: (Bits) Value seq11 129 1e-24 seq2 129 1e-24 seq9 122 2e-22 >seq11 Length=35963958 Score = 129 bits (142), Expect = 1e-24 Identities = 357/538 (66%), Gaps = 17/538 (3%) Strand=Plus/Plus Query 42335 CTGGACCGCCGAGGAGATTGACCTGGCCAAGGACA-CGGCCGGCTGGGAG----TCACTG 42389 ||||||||||||||| |||| || | ||||| | ||| ||||||| |||| | Sbjct 2850218 CTGGACCGCCGAGGAAGTTGATCTTTCTCAGGACGTCCGCCA-CTGGGAGAACCTCACCG 2850276 Query 42390 TCTGAGAACGAAAAGTTTTTCCTCAAAAACATACTGGCCTTCTTCGCCGCCTCTGACGGC 42449 | | ||||| | || | |||| || | || || |||||||||||||||||||| Sbjct 2850277 ACGGCGAACGCCACTTTGT----CAAACACGTCCTCGCTTTCTTCGCCGCCTCTGACGGT 2850332 Query 42450 ATAGTCAATGAGAACCTGGCCACCAGGTTCATGAAAGAGGTGCAGTACTTTGAGGCGCGC 42509 || || ||| ||||| ||| ||||| |||| || | || | ||||||||| Sbjct 2850333 ATCGTTCTTGAAAACCTTGCCGGAAGGTTTATGACTGAAATCCAAGTCGCTGAGGCGCG- 2850391 Query 42510 TGC-TTCTACGGCTTCCAGATAGCCATAGAGAACGTGCACTCTGAGGTGTACGCCAAACT 42568 ||| |||||||| ||||| || || || || || | || |||||| ||||| || Sbjct 2850392 TGCTTTCTACGGATTCCAAATTGCTATTGAAAATATCCATTCTGAGATGTACAGTCTCCT 2850451 Query 42569 GCTCAACACGTACATCCTGGATCCCGTCGAGCGTAACGGGCTGTTCAAGGCCATGGAGAC 42628 || | || || ||| |||| | | || ||| | ||||| | || | || || Sbjct 2850452 TCTTGAAACATATATCAAGGATTCGGCTGATAAAAACCGTTTGTTCCACGCGGTTGAAAC 2850511 Query 42629 GATGCCCTGCATCAAGAAGAAGGCGGACTGGGCGCTCAACTGGATCGAGAGTCCCGACGC 42688 || || || | || ||| || || |||||| | |||||||| || | || Sbjct 2850512 AATCCCTTGTGTTGCGAGGAAAGCTGAGTGGGCGTTACGTTGGATCGATGGTTCAGA--- 2850568 Query 42689 AACGTTCGGCGAGAGGCTGGTAGCCTTTACCGCCGTCGAGGGCATCTTCTTCTCGGGCGC 42748 | | |||| ||| | || || || ||| | || || || || |||||||| || Sbjct 2850569 ATCCTTCGCTGAGCGCCTTGTTGCGTTTGCTTGTGTTGAAGGAATTTTCTTCTCTGGAAG 2850628 Query 42749 CTTCGCCTCCATCTTCTGGCTCAAGCAGA-AGGTGTCGATGCCCGGACTCACCTTCTCGA 42807 |||| | || |||||||| ||| ||| |||| | ||||| ||||| |||||||| | Sbjct 2850629 CTTCTGTGCTATATTCTGGCTTAAGAAGAGAGGTCT-TATGCCTGGACTTACCTTCTCAA 2850687 Query 42808 ACGAACTCATCAGCAGGGACGAGGGGCTGCATAGGGACTTTGCCTGCCTCCTGTTCTC 42865 |||| | || | || || ||||| ||| | || || || ||| | ||| ||| Sbjct 2850688 ACGAGTTGATATCGCGAGATGAAGGGCTTCATTGTGATTTCGCTTGCTTGTTGTACTC 2850745 >seq2 Length=24697652 Score = 129 bits (142), Expect = 1e-24 Identities = 345/516 (67%), Gaps = 11/516 (2%) Strand=Plus/Minus Query 42300 ATCTGGTCCATGTACAAGAAGGC-GCAGTTCTCCAACTGGACCGCCGAGGAGATTGACCT 42358 |||||| |||||||| || || | || | || |||||||||||| || | || || Sbjct 21047463 ATCTGGGAAATGTACAAAAAAGCAGAAGCT-TCATTCTGGACCGCCGAAGAAGTCGATCT 21047405 Query 42359 GGC-CAAGGACACGGCCGGCTGGGAGTCACTGTCTGAGAACGAAAAGTTTTTCCTCAAAA 42417 | |||| | | ||| |||||| || || | || |||| ||| ||||| Sbjct 21047404 CTCTCAAGATCTCCGCCA-CTGGGACTCCCTCACCGACGGCGAACGCCACTTCATCAAAC 21047346 Query 42418 ACATACTGGCCTTCTTCGCCGCCTCTGACGGCATAGTCAATGAGAACCTGGCCACCAGGT 42477 |||| || || ||||||||||| || ||||| || ||| ||| ||||| ||| |||| Sbjct 21047345 ACATCCTCGCTTTCTTCGCCGCTTCCGACGGAATCGTCCTTGAAAACCTCGCCGGAAGGT 21047286 Query 42478 TCATGAAAGAGGTGCAGTACTTTGAGGCGCGCTGC-TTCTACGGCTTCCAGATAGCCATA 42536 |||||| |||| | || | ||||||||| ||| ||||||||||||||||| || || Sbjct 21047285 TCATGACAGAGATACAAGTCGCTGAGGCGCG-TGCATTCTACGGCTTCCAGATCGCAATC 21047227 Query 42537 GAGAACGTGCACTCTGAGGTGTACGCCAAACTGCTCAACACGTACATCCTGGATCCCGTC 42596 ||||| | || |||||| |||| || || | ||||| ||| ||| ||| Sbjct 21047226 GAGAATATCCATTCTGAGATGTATAGTCTCCTTCTTGAAACGTATATCAAAGATTCCGCT 21047167 Query 42597 GAGCGTAACGGGCTGTTCAAGGCCATGGAGACGATGCCCTGCATCAAGAAGAAGGCGGAC 42656 || || | | ||| | || || |||||||| || ||| | || || || || Sbjct 21047166 GATAAAAATCGATTATTCCACGCAATAGAGACGATACCTTGCGTTGCTAAAAAAGCTGAG 21047107 Query 42657 TGGGCGCTCAACTGGATCGAGAGTCCCGACGCAACGTTCGGCGAGAGGCTGGTAGCCTTT 42716 |||||||| |||||||| || | || | | |||| || | || || || ||| Sbjct 21047106 TGGGCGCTTCGTTGGATCGACGGTTCAGA---ATCCTTCGCTGAACGTCTCGTTGCGTTT 21047050 Query 42717 ACCGCCGTCGAGGGCATCTTCTTCTCGGGCGCCTTCGCCTCCATCTTCTGGCTCAAG-CA 42775 | || || || || |||||||| || |||| | || || ||| | ||| | Sbjct 21047049 GCTTGTGTTGAAGGTATTTTCTTCTCTGGAAGCTTCTGTGCGATATTTTGGTTGAAGAAA 21046990 Query 42776 GAAGGTGTCGATGCCCGGACTCACCTTCTCGAACGA 42811 ||| | ||||| || || |||||||| ||||| Sbjct 21046989 CGAGGCCT-TATGCCTGGTCTTACCTTCTCAAACGA 21046955 >seq9 Length=21753712 Score = 122 bits (134), Expect = 2e-22 Identities = 272/405 (67%), Gaps = 5/405 (1%) Strand=Plus/Minus Query 42408 TTCCTCAAAAACATACTGGCCTTCTTCGCCGCCTCTGACGGCATAGTCAATGAGAACCTG 42467 ||| ||||| |||| || ||||||||||||||||| ||||| || || ||| ||||| Sbjct 19304362 TTCATCAAACACATCCTCGCCTTCTTCGCCGCCTCCGACGGAATCGTTCTTGAAAACCTC 19304303 Query 42468 GCCACCAGGTTCATGAAAGAGGTGCAGTACTTTGAGGCGCGCTGC-TTCTACGGCTTCCA 42526 ||| |||||||||| | | || | ||||||||| ||| |||||||||||||| Sbjct 19304302 GCCGGAAGGTTCATGACTCAAATTCAAGTCGCTGAGGCGCG-TGCTTTCTACGGCTTCCA 19304244 Query 42527 GATAGCCATAGAGAACGTGCACTCTGAGGTGTACGCCAAACTGCTCAACACGTACATCCT 42586 || ||||| || || | ||||||||| |||| | || ||| | || || ||| Sbjct 19304243 AATCGCCATTGAAAATATCCACTCTGAGATGTATAGCCTCCTTCTCGAAACATATATCAA 19304184 Query 42587 GGATCCCGTCGAGCGTAACGGGCTGTTCAAGGCCATGGAGACGATGCCCTGCATCAAGAA 42646 || ||| || ||| | | ||| | || || || || || || || | | || Sbjct 19304183 AGACTCCGCTGATAAAAACCGATTATTCCACGCGATTGAAACCATTCCTTGTGTTACAAA 19304124 Query 42647 GAAGGCGGACTGGGCGCTCAACTGGATCGAGAGTCCCGACGCAACGTTCGGCGAGAGGCT 42706 ||| || || |||||| | |||||||| || | || | | |||| || | || Sbjct 19304123 GAAAGCTGAATGGGCGTTACGATGGATCGACGGTTCAGA---ATCCTTCGCAGAACGCCT 19304067 Query 42707 GGTAGCCTTTACCGCCGTCGAGGGCATCTTCTTCTCGGGCGCCTTCGCCTCCATCTTCTG 42766 || || ||| | ||| || || || || ||||| || |||| | || || || Sbjct 19304066 CGTTGCTTTTGCTTGCGTTGAAGGAATATTTTTCTCTGGAAGCTTCTGTGCGATATTTTG 19304007 Query 42767 GCTCAAGCAGAAGGTGTCGATGCCCGGACTCACCTTCTCGAACGA 42811 ||| || | | || |||||||| || || ||||||||||| Sbjct 19304006 GCTTAAAAAACGCGGGTTAATGCCCGGTCTTACATTCTCGAACGA 19303962 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 944178981050480