Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Lupinus_20angustifolius_20[refseq_20GCF_5F001865875.1_202016-11-16]
13,573 sequences; 609,203,021 total letters
Query= NC_010191.2
Length=186713
Score E
Sequences producing significant alignments: (Bits) Value
seq2 109 7e-19
seq16 95.1 1e-14
seq15 87.8 2e-12
>seq2
Length=24697652
Score = 109 bits (120), Expect = 7e-19
Identities = 114/150 (76%), Gaps = 0/150 (0%)
Strand=Plus/Plus
Query 126058 GTGGAGACCCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGTCCTGGCATGAGACC 126117
||| | |||||| || || ||||| | || || |||||| || || ||||| || ||
Sbjct 21046927 GTGTAAACCCTCATCTCGCGAGATTAACTCGTTTGAGAAGGTAAGACCAGGCATAAGGCC 21046986
Query 126118 CCGCTTCTTCAACCAGAAAATCGCACAAAATGAACCCGAGAAGAAGATTCCCTCCACACA 126177
|| ||||||||||| || |||||||| || || |||||||| || || || |||||
Sbjct 21046987 TCGTTTCTTCAACCAAAATATCGCACAGAAGCTTCCAGAGAAGAAAATACCTTCAACACA 21047046
Query 126178 CGCGAACGCAAAGAGACGCTCAGCAAAGGA 126207
|| ||||||| |||||| ||||| |||||
Sbjct 21047047 AGCAAACGCAACGAGACGTTCAGCGAAGGA 21047076
>seq16
Length=20786881
Score = 95.1 bits (104), Expect = 1e-14
Identities = 178/256 (70%), Gaps = 8/256 (3%)
Strand=Plus/Plus
Query 10819 GTCAAGGATATCAATGCGGTTCGTCGCCGCGATGACAACGATGCCCGTCTCGTTATCAAA 10878
|||||| || ||| | ||| || || || || |||| || || || | |||||
Sbjct 9801843 GTCAAGAATGTCAGCTCTGTTAGTTGCTGCAATCACAATGACACCGGTATTACCCTCAAA 9801902
Query 10879 GCCATCCATCTCAGTCAAGAGTTGATTGATGGTTTGTTCGCGTTCATCATTCGCGGGCAT 10938
|||||||| || ||||| ||||| || | ||||||||| | |||||| ||| | ||
Sbjct 9801903 CCCATCCATTTCTGTCAAAAGTTGGTTAAGGGTTTGTTCTCTTTCATCGTTCCCTC-CAC 9801961
Query 10939 ACCA--CCCGCACTGCGTTGCTTACCGACGGCGTCAATTTCATCGATGAAAACGATACAC 10996
||| || | || | |||| | || || |||||||||||||| | ||||| || ||
Sbjct 9801962 -CCATTCCAGTACCTCTTTGCCTTCCAACAGCGTCAATTTCATCAACAAAAACAATGCAA 9802020
Query 10997 GGTTGATTTTCACGGGCAACTTC--AAAGATATCTCGGACTCTCTTGGCACCGACACCCA 11054
|| ||| || ||| |||| || | ||| ||||||| ||||| ||||| |
Sbjct 9802021 GGAGAATTCTCTTTGGC--CTTCTTGAATAAATCACGGACTCGAGAAGCACCAACACCAA 9802078
Query 11055 CAAACATTTCCACAAA 11070
||||||| || |||||
Sbjct 9802079 CAAACATCTCAACAAA 9802094
>seq15
Length=20964703
Score = 87.8 bits (96), Expect = 2e-12
Identities = 141/198 (71%), Gaps = 6/198 (3%)
Strand=Plus/Minus
Query 10876 AAAGCCATCCATCTCAGTCAAGAGTTGATTGATGGTTTGTTCGCGTTCATCATTCGCGGG 10935
||| ||||||||||| ||||| | || || || |||||||| | ||||||||| |
Sbjct 20643967 AAACCCATCCATCTCGGTCAATAACTGGTTAATAGTTTGTTCCCTCTCATCATTCCC--A 20643910
Query 10936 CATACC--ACCCGCACTGCGTTGCTTACCGACGGCGTCAATTTCATCGATGAAAACGATA 10993
| | || ||| |||| | ||| | || || || ||||||||||| || ||||| ||
Sbjct 20643909 CCTCCCATACCTGCACCCCTTTGTCTTCCCACAGCATCAATTTCATCTATAAAAACAATG 20643850
Query 10994 CACGGTTGATTTTCAC-GGGCAACTTCAAAGATATCTCGGACTCTCTTGGCACCGACACC 11052
|| || | ||| || || |||||| | ||||| || || ||||| |||||
Sbjct 20643849 CAAGG-CGCTTTCGACTTCGCCTTTTCAAACAAATCTCTAACCCTTGAAGCACCAACACC 20643791
Query 11053 CACAAACATTTCCACAAA 11070
||||||| |||||||||
Sbjct 20643790 AACAAACAATTCCACAAA 20643773
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 597252251494840
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |