Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lupinus_20angustifolius_20[refseq_20GCF_5F001865875.1_202016-11-16] 13,573 sequences; 609,203,021 total letters Query= NC_010191.2 Length=186713 Score E Sequences producing significant alignments: (Bits) Value seq2 109 7e-19 seq16 95.1 1e-14 seq15 87.8 2e-12 >seq2 Length=24697652 Score = 109 bits (120), Expect = 7e-19 Identities = 114/150 (76%), Gaps = 0/150 (0%) Strand=Plus/Plus Query 126058 GTGGAGACCCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGTCCTGGCATGAGACC 126117 ||| | |||||| || || ||||| | || || |||||| || || ||||| || || Sbjct 21046927 GTGTAAACCCTCATCTCGCGAGATTAACTCGTTTGAGAAGGTAAGACCAGGCATAAGGCC 21046986 Query 126118 CCGCTTCTTCAACCAGAAAATCGCACAAAATGAACCCGAGAAGAAGATTCCCTCCACACA 126177 || ||||||||||| || |||||||| || || |||||||| || || || ||||| Sbjct 21046987 TCGTTTCTTCAACCAAAATATCGCACAGAAGCTTCCAGAGAAGAAAATACCTTCAACACA 21047046 Query 126178 CGCGAACGCAAAGAGACGCTCAGCAAAGGA 126207 || ||||||| |||||| ||||| ||||| Sbjct 21047047 AGCAAACGCAACGAGACGTTCAGCGAAGGA 21047076 >seq16 Length=20786881 Score = 95.1 bits (104), Expect = 1e-14 Identities = 178/256 (70%), Gaps = 8/256 (3%) Strand=Plus/Plus Query 10819 GTCAAGGATATCAATGCGGTTCGTCGCCGCGATGACAACGATGCCCGTCTCGTTATCAAA 10878 |||||| || ||| | ||| || || || || |||| || || || | ||||| Sbjct 9801843 GTCAAGAATGTCAGCTCTGTTAGTTGCTGCAATCACAATGACACCGGTATTACCCTCAAA 9801902 Query 10879 GCCATCCATCTCAGTCAAGAGTTGATTGATGGTTTGTTCGCGTTCATCATTCGCGGGCAT 10938 |||||||| || ||||| ||||| || | ||||||||| | |||||| ||| | || Sbjct 9801903 CCCATCCATTTCTGTCAAAAGTTGGTTAAGGGTTTGTTCTCTTTCATCGTTCCCTC-CAC 9801961 Query 10939 ACCA--CCCGCACTGCGTTGCTTACCGACGGCGTCAATTTCATCGATGAAAACGATACAC 10996 ||| || | || | |||| | || || |||||||||||||| | ||||| || || Sbjct 9801962 -CCATTCCAGTACCTCTTTGCCTTCCAACAGCGTCAATTTCATCAACAAAAACAATGCAA 9802020 Query 10997 GGTTGATTTTCACGGGCAACTTC--AAAGATATCTCGGACTCTCTTGGCACCGACACCCA 11054 || ||| || ||| |||| || | ||| ||||||| ||||| ||||| | Sbjct 9802021 GGAGAATTCTCTTTGGC--CTTCTTGAATAAATCACGGACTCGAGAAGCACCAACACCAA 9802078 Query 11055 CAAACATTTCCACAAA 11070 ||||||| || ||||| Sbjct 9802079 CAAACATCTCAACAAA 9802094 >seq15 Length=20964703 Score = 87.8 bits (96), Expect = 2e-12 Identities = 141/198 (71%), Gaps = 6/198 (3%) Strand=Plus/Minus Query 10876 AAAGCCATCCATCTCAGTCAAGAGTTGATTGATGGTTTGTTCGCGTTCATCATTCGCGGG 10935 ||| ||||||||||| ||||| | || || || |||||||| | ||||||||| | Sbjct 20643967 AAACCCATCCATCTCGGTCAATAACTGGTTAATAGTTTGTTCCCTCTCATCATTCCC--A 20643910 Query 10936 CATACC--ACCCGCACTGCGTTGCTTACCGACGGCGTCAATTTCATCGATGAAAACGATA 10993 | | || ||| |||| | ||| | || || || ||||||||||| || ||||| || Sbjct 20643909 CCTCCCATACCTGCACCCCTTTGTCTTCCCACAGCATCAATTTCATCTATAAAAACAATG 20643850 Query 10994 CACGGTTGATTTTCAC-GGGCAACTTCAAAGATATCTCGGACTCTCTTGGCACCGACACC 11052 || || | ||| || || |||||| | ||||| || || ||||| ||||| Sbjct 20643849 CAAGG-CGCTTTCGACTTCGCCTTTTCAAACAAATCTCTAACCCTTGAAGCACCAACACC 20643791 Query 11053 CACAAACATTTCCACAAA 11070 ||||||| ||||||||| Sbjct 20643790 AACAAACAATTCCACAAA 20643773 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 597252251494840