Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lupinus_20angustifolius_20[refseq_20GCF_5F001865875.1_202016-11-16] 13,573 sequences; 609,203,021 total letters Query= NC_011345.1 Length=155122 Score E Sequences producing significant alignments: (Bits) Value seq18 111 2e-19 seq19 105 7e-18 seq4 102 8e-17 seq20 96.9 3e-15 seq17 96.9 3e-15 seq3 96.9 3e-15 seq5 93.3 4e-14 seq12525 82.4 8e-11 >seq18 Length=16588007 Score = 111 bits (122), Expect = 2e-19 Identities = 143/195 (73%), Gaps = 2/195 (1%) Strand=Plus/Plus Query 138421 GACTCCTTTTGAATGTTGTAGTCGCTCATAGTACGCGAGTCCTCGAGTTGTTTACCGGAA 138480 |||||||| ||||| ||||| ||| | ||| || ||| ||||||||||| |||| Sbjct 12189700 GACTCCTTCTGAATATTGTAATCGGCGAGAGTGCGACCGTCTTCGAGTTGTTTTCCGGCG 12189759 Query 138481 TAGATTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTGTCGGTGATTTTTTGTTTTA-A 138539 |||| | |||||| |||||||| || || ||||| ||||| ||| || || | | Sbjct 12189760 AAGATCAAACGCTGCTGGTCCGGTGGAATTCCTTCCTTGTCTTGGATCTTGGCCTTGACA 12189819 Query 138540 TTGTTCCACGGTGTCGGTCGACTCCACCTCGACCGTCAGCGTTTTACCAGTCAGAGTTTT 138599 ||| || | ||| |||| || || ||||||| || | |||||||| || || ||||| Sbjct 12189820 TTG-TCGATGGTATCGGAGGATTCAACCTCGAGGGTAATGGTTTTACCCGTTAGGGTTTT 12189878 Query 138600 TACAAAAATCTGCAT 138614 || || |||||||| Sbjct 12189879 CACGAAGATCTGCAT 12189893 >seq19 Length=18159812 Score = 105 bits (116), Expect = 7e-18 Identities = 164/229 (72%), Gaps = 4/229 (2%) Strand=Plus/Minus Query 138388 CCGCCTCGCAAACGCAAAACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTC-GCT 138446 || || || | ||| | || ||||| | | | ||||||||||| ||||| ||||| ||| Sbjct 4941344 CCACCACGGAGACGAAGCACCAAATGAAGGGTGGACTCCTTTTGGATGTTATAGTCTGCT 4941285 Query 138447 CATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGG 138506 | |||||| ||||| || || || || | |||| |||||||| ||||||||||| Sbjct 4941284 -AGGGTACGCCCATCCTCAAGCTGCTTGCCAGCGAAGATGAGACGCTGCTGGTCCGGAGG 4941226 Query 138507 TATACCTTCTTTGTCGGTGATTTTTTGTTTTA-ATTGTTCCACGGTGTCGGTCGACTCCA 138565 |||||||| || || ||| || || | |||| || | ||||| | ||| | Sbjct 4941225 GATACCTTCCTTATCCTGGATCTTGGCCTTCACATTG-TCGATTGTGTCCGAACTCTCTA 4941167 Query 138566 CCTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTACAAAAATCTGCAT 138614 |||| | || | || || ||||| ||||| || |||||||||||||| Sbjct 4941166 CCTCCAAAGTGATTGTCTTGCCAGTAAGAGTCTTCACAAAAATCTGCAT 4941118 >seq4 Length=27333975 Score = 102 bits (112), Expect = 8e-17 Identities = 141/195 (72%), Gaps = 2/195 (1%) Strand=Plus/Minus Query 138421 GACTCCTTTTGAATGTTGTAGTCGCTCATAGTACGCGAGTCCTCGAGTTGTTTACCGGAA 138480 |||||||| || |||||||||||| | || || ||| ||||| ||||| |||| Sbjct 22406904 GACTCCTTCTGGATGTTGTAGTCGGCGAGGGTGCGACCGTCTTCGAGCTGTTTTCCGGCG 22406845 Query 138481 TAGATTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTGTCGGTGATTTTTTGTTTTA-A 138539 |||| || || || |||||||| || || ||||| ||||| ||| || || | | Sbjct 22406844 AAGATGAGGCGTTGCTGGTCCGGTGGAATTCCTTCCTTGTCTTGGATCTTGGCCTTCACA 22406785 Query 138540 TTGTTCCACGGTGTCGGTCGACTCCACCTCGACCGTCAGCGTTTTACCAGTCAGAGTTTT 138599 ||| || | ||||||| || || ||||| | || | ||| ||||| || || ||||| Sbjct 22406784 TTG-TCGATTGTGTCGGAAGATTCAACCTCAAGGGTTATCGTCTTACCCGTTAGGGTTTT 22406726 Query 138600 TACAAAAATCTGCAT 138614 || ||||||||||| Sbjct 22406725 CACGAAAATCTGCAT 22406711 Score = 84.2 bits (92), Expect = 2e-11 Identities = 135/194 (70%), Gaps = 0/194 (0%) Strand=Plus/Minus Query 138421 GACTCCTTTTGAATGTTGTAGTCGCTCATAGTACGCGAGTCCTCGAGTTGTTTACCGGAA 138480 ||||||||||| ||||||||||| | ||| || ||||| || || || |||| | Sbjct 3993276 GACTCCTTTTGTATGTTGTAGTCAGCAAGAGTGCGACCATCCTCAAGCTGCTTGCCGGCA 3993217 Query 138481 TAGATTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTGTCGGTGATTTTTTGTTTTAAT 138540 |||| ||||| || || ||||| || || ||||| ||||| ||| || || | Sbjct 3993216 AAGATGAGACGTTGCTGATCCGGTGGGATCCCTTCCTTGTCTTGGATCTTAGCCTTCACG 3993157 Query 138541 TGTTCCACGGTGTCGGTCGACTCCACCTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTT 138600 | || | |||||||| ||| ||||||| || | || || || || || ||||| Sbjct 3993156 TTGTCGATGGTGTCGGAACTCTCTACCTCGAGAGTGATGGTCTTGCCGGTGAGGGTTTTC 3993097 Query 138601 ACAAAAATCTGCAT 138614 || || || ||||| Sbjct 3993096 ACGAAGATTTGCAT 3993083 >seq20 Length=21988590 Score = 96.9 bits (106), Expect = 3e-15 Identities = 141/196 (72%), Gaps = 4/196 (2%) Strand=Plus/Plus Query 138421 GACTCCTTTTGAATGTTGTAGTCGCTCATAGTACGCGAGTCCTCGAGTTGTTTACCGGAA 138480 |||||||| || |||||||||||| | || || ||| || ||||| || |||| Sbjct 4225122 GACTCCTTCTGGATGTTGTAGTCGGCGAGGGTGCGACCGTCTTCCAGTTGCTTTCCGGCG 4225181 Query 138481 TAGATTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTGTCGGTGATTTTTTG--TTTTA 138538 |||| || ||||| |||||||| || || ||||| ||||| ||| | || | || Sbjct 4225182 AAGATGAGGCGCTGCTGGTCCGGTGGGATTCCTTCCTTGTC-CTGAATCTTGGCCTTCAC 4225240 Query 138539 ATTGTTCCACGGTGTCGGTCGACTCCACCTCGACCGTCAGCGTTTTACCAGTCAGAGTTT 138598 |||| || | ||||| | || || ||||||| || | ||||| ||||| || |||| Sbjct 4225241 ATTG-TCAATTGTGTCTGAGGATTCAACCTCGAGGGTTATTGTTTTCCCAGTTAGGGTTT 4225299 Query 138599 TTACAAAAATCTGCAT 138614 | || || |||||||| Sbjct 4225300 TCACGAAGATCTGCAT 4225315 >seq17 Length=21299880 Score = 96.9 bits (106), Expect = 3e-15 Identities = 141/197 (72%), Gaps = 2/197 (1%) Strand=Plus/Minus Query 138419 TTGACTCCTTTTGAATGTTGTAGTCGCTCATAGTACGCGAGTCCTCGAGTTGTTTACCGG 138478 |||| ||||| || |||||||||||| | || || ||| || || ||||| |||| Sbjct 4985010 TTGATTCCTTCTGGATGTTGTAGTCGGCGAGGGTGCGACCGTCTTCAAGCTGTTTTCCGG 4984951 Query 138479 AATAGATTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTGTCGGTGATTTTTTGTTTTA 138538 |||| |||||||| |||||||| || || ||||| ||||| ||| || || | Sbjct 4984950 CGAAGATGAGACGCTGCTGGTCCGGTGGGATTCCTTCCTTGTCTTGGATCTTGGCCTTGA 4984891 Query 138539 -ATTGTTCCACGGTGTCGGTCGACTCCACCTCGACCGTCAGCGTTTTACCAGTCAGAGTT 138597 |||| || | ||| |||| || || || |||| || | ||||| || || || ||| Sbjct 4984890 CATTG-TCGATGGTATCGGAGGATTCAACTTCGAGGGTGATGGTTTTCCCCGTTAGGGTT 4984832 Query 138598 TTTACAAAAATCTGCAT 138614 || || || |||||||| Sbjct 4984831 TTCACGAAGATCTGCAT 4984815 >seq3 Length=30153019 Score = 96.9 bits (106), Expect = 3e-15 Identities = 141/197 (72%), Gaps = 2/197 (1%) Strand=Plus/Plus Query 138419 TTGACTCCTTTTGAATGTTGTAGTCGCTCATAGTACGCGAGTCCTCGAGTTGTTTACCGG 138478 |||| ||||| || |||||||||||| | || || ||| || || ||||| |||| Sbjct 15142524 TTGATTCCTTCTGGATGTTGTAGTCGGCGAGGGTGCGACCGTCTTCAAGCTGTTTTCCGG 15142583 Query 138479 AATAGATTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTGTCGGTGATTTTTTGTTTTA 138538 |||| |||||||| |||||||| || || ||||| ||||| ||| || || | Sbjct 15142584 CGAAGATGAGACGCTGCTGGTCCGGTGGGATTCCTTCCTTGTCTTGGATCTTGGCCTTGA 15142643 Query 138539 -ATTGTTCCACGGTGTCGGTCGACTCCACCTCGACCGTCAGCGTTTTACCAGTCAGAGTT 138597 |||| || | ||| |||| || || || |||| || | ||||| || || || ||| Sbjct 15142644 CATTG-TCGATGGTATCGGAGGATTCAACTTCGAGGGTGATGGTTTTCCCCGTTAGGGTT 15142702 Query 138598 TTTACAAAAATCTGCAT 138614 || || || |||||||| Sbjct 15142703 TTCACGAAGATCTGCAT 15142719 >seq5 Length=26376911 Score = 93.3 bits (102), Expect = 4e-14 Identities = 159/228 (70%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 138388 CCGCCTCGCAAACGCAAAACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCTC 138447 || || || | ||| | || ||||| | | | ||||||||||| |||||||| || Sbjct 2894380 CCACCACGAAGACGAAGCACCAAATGGAGGGTGGACTCCTTTTGGATGTTGTAATCAGCA 2894439 Query 138448 ATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGGT 138507 | |||||| ||||| ||||| || || | | | || |||||||||||||| || || Sbjct 2894440 AGGGTACGCCCATCCTCAAGTTGCTTGCCAGCAAAAATGAGACGCTGTTGGTCTGGTGGG 2894499 Query 138508 ATACCTTCTTTGTCGGTGATTTTTTG-TTTTAATTGTTCCACGGTGTCGGTCGACTCCAC 138566 || ||||| ||||| ||| |||| | |||| | || | ||| || | ||| || Sbjct 2894500 ATCCCTTCCTTGTC-TTGAATTTTAGCCTTTACATTATCTATGGTATCAGAACTCTCAAC 2894558 Query 138567 CTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTACAAAAATCTGCAT 138614 |||| || | || || ||||| || || || ||||| || ||||| Sbjct 2894559 TTCGAGAGTGATGGTCTTGCCAGTGAGTGTCTTAACAAAGATTTGCAT 2894606 Score = 84.2 bits (92), Expect = 2e-11 Identities = 158/229 (69%), Gaps = 4/229 (2%) Strand=Plus/Plus Query 138388 CCGCCTCGCAAACGCAAAACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCTC 138447 || || | || |||||| || | || | | | |||||||| |||||||||||||| Sbjct 2893696 CCTCCCCTCAGACGCAAGACAAGGTGGAGGGTAGACTCCTTCTGAATGTTGTAGTCTGCA 2893755 Query 138448 ATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGGT 138507 | |||||| || || || ||||| || | | | || | | || ||||| || || Sbjct 2893756 AGAGTACGTCCATCTTCAAGCTGTTTCCCAGCAAAAATCAACCTTTGCTGGTCTGGCGGG 2893815 Query 138508 ATACCTTCTTTGTCGGTGATTTTTTGTTTT--AATTGTTCCACGGTGTCGGTCGACTCCA 138565 ||||| |||||||| ||| | || | ||| |||| || | ||||| | ||| | Sbjct 2893816 ATACCCTCTTTGTC-TTGAATCTTAGCTTTCACATTG-TCAATTGTGTCTGAGCTCTCTA 2893873 Query 138566 CCTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTACAAAAATCTGCAT 138614 |||| | || | || || ||||| || || || |||||||||||||| Sbjct 2893874 CCTCCAGAGTGATTGTCTTGCCAGTAAGTGTCTTGACAAAAATCTGCAT 2893922 >seq12525 Length=279716 Score = 82.4 bits (90), Expect = 8e-11 Identities = 137/198 (69%), Gaps = 0/198 (0%) Strand=Plus/Minus Query 138421 GACTCCTTTTGAATGTTGTAGTCGCTCATAGTACGCGAGTCCTCGAGTTGTTTACCGGAA 138480 |||||||| || ||||||||||| | || || || ||||| |||||||| | | Sbjct 230442 GACTCCTTCTGGATGTTGTAGTCTGCAAGGGTGCGGCCATCTTCGAGCTGTTTACCAGCA 230383 Query 138481 TAGATTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTGTCGGTGATTTTTTGTTTTAAT 138540 |||| || | ||| ||||| ||||| || ||||| ||||| ||| || || | Sbjct 230382 AAGATCAGCCTCTGCTGGTCTGGAGGAATGCCTTCCTTGTCCTGGATCTTCGCCTTGACA 230323 Query 138541 TGTTCCACGGTGTCGGTCGACTCCACCTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTT 138600 | || | |||||| | || ||||| | || | || || ||||| || || || Sbjct 230322 TTATCAATGGTGTCAGAGCTTTCTACCTCAAGAGTGATTGTCTTTCCAGTAAGGGTCTTC 230263 Query 138601 ACAAAAATCTGCATGGCT 138618 ||||||||||||||| || Sbjct 230262 ACAAAAATCTGCATGCCT 230245 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 496178202880560