Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lupinus_20angustifolius_20[refseq_20GCF_5F001865875.1_202016-11-16] 13,573 sequences; 609,203,021 total letters Query= NC_011423.1 Length=111724 Score E Sequences producing significant alignments: (Bits) Value seq18 131 1e-25 seq5 111 1e-19 seq4 109 4e-19 seq17 96.9 2e-15 seq3 96.9 2e-15 seq6 93.3 3e-14 seq12525 91.5 1e-13 seq19 89.7 4e-13 seq20 84.2 2e-11 >seq18 Length=16588007 Score = 131 bits (144), Expect = 1e-25 Identities = 156/212 (74%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 14974 TGAAGGGTAGAATCTTTTTGTATGTTGTAATCGCTGAGAATTCTCGCGTCTTCTAATTGT 15033 || ||||| || || || || || ||||||||| |||| | | ||||||| | |||| Sbjct 12189691 TGGAGGGTCGACTCCTTCTGAATATTGTAATCGGCGAGAGTGCGACCGTCTTCGAGTTGT 12189750 Query 15034 TTGCCAGCGTATATCAAACGCTGTTGGTCGTTTGGAATTCCTTCCTTGTCACAAATTTTG 15093 || || ||| | ||||||||||| ||||| |||||||||||||||||| || ||| Sbjct 12189751 TTTCCGGCGAAGATCAAACGCTGCTGGTCCGGTGGAATTCCTTCCTTGTCTTGGATCTTG 12189810 Query 15094 CTTTTTACAATTTCTATAGTATCGCTATTTTCTACGTCTAAGGTAATGGTTTTACCTGTC 15153 || ||| | || || |||||| ||| || || | ||||||||||||||| || Sbjct 12189811 GCCTTGACATTGTCGATGGTATCGGAGGATTCAACCTCGAGGGTAATGGTTTTACCCGTT 12189870 Query 15154 AGAGTTTTTACAAAAATTTGCATATTTGAAAT 15185 || ||||| || || || ||||| | ||||| Sbjct 12189871 AGGGTTTTCACGAAGATCTGCATCGTCGAAAT 12189902 >seq5 Length=26376911 Score = 111 bits (122), Expect = 1e-19 Identities = 150/209 (72%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 14968 ACTAAATGAAGGGTAGAATCTTTTTGTATGTTGTAATCGCTGAGAATTCTCGCGTCTTCT 15027 || ||||| ||||| || || ||||| ||||||||||| || | | | | || || Sbjct 2894398 ACCAAATGGAGGGTGGACTCCTTTTGGATGTTGTAATCAGCAAGGGTACGCCCATCCTCA 2894457 Query 15028 AATTGTTTGCCAGCGTATATCAAACGCTGTTGGTCGTTTGGAATTCCTTCCTTGTCACAA 15087 | ||| |||||||| | || | |||||||||||| ||| || ||||||||||| | Sbjct 2894458 AGTTGCTTGCCAGCAAAAATGAGACGCTGTTGGTCTGGTGGGATCCCTTCCTTGTCTTGA 2894517 Query 15088 ATTTTGCTTTTTACAATTTCTATAGTATCGCTATTTTCTACGTCTAAGGTAATGGTTTTA 15147 ||||| |||||| | ||||| ||||| | | || || || | || ||||| || Sbjct 2894518 ATTTTAGCCTTTACATTATCTATGGTATCAGAACTCTCAACTTCGAGAGTGATGGTCTTG 2894577 Query 15148 CCTGTCAGAGTTTTTACAAAAATTTGCAT 15176 || || || || || ||||| |||||||| Sbjct 2894578 CCAGTGAGTGTCTTAACAAAGATTTGCAT 2894606 Score = 109 bits (120), Expect = 4e-19 Identities = 153/212 (72%), Gaps = 2/212 (1%) Strand=Plus/Minus Query 14974 TGAAGGGTAGAATCTTTTTGTATGTTGTAATCGCTGAGAATTCTCGCGTCTTCTAATTGT 15033 || ||||| || || || || || ||||||||| ||| | | ||||||| | |||| Sbjct 15676341 TGGAGGGTCGATTCCTTCTGGATATTGTAATCGGCGAGGGTGCGACCGTCTTCGAGTTGT 15676282 Query 15034 TTGCCAGCGTATATCAAACGCTGTTGGTCGTTTGGAATTCCTTCCTTGTCACAAATTTTG 15093 || || ||| | |||||| |||| |||||| | ||||||||||||||||| || ||| Sbjct 15676281 TTTCCGGCGAAGATCAAATGCTGCTGGTCGGT-GGAATTCCTTCCTTGTCTTGGATCTTG 15676223 Query 15094 CTTTTTACAATTTCTATAGTATCGCTATTTTCTACGTCTAAGGTAATGGTTTTACCTGTC 15153 || ||| | || || |||| | ||| || || | ||| ||||||||||| || Sbjct 15676222 GCCTTGACATTGTCGATGGTATGGGAGGATTCAACCTCGAGGGTGATGGTTTTACCCGTT 15676163 Query 15154 AGAGTTTTTACAAAAATTTGCATATTTGAAAT 15185 || | ||| ||||| || ||||| | ||||| Sbjct 15676162 AG-GGTTTCACAAAGATCTGCATCGTCGAAAT 15676132 >seq4 Length=27333975 Score = 109 bits (120), Expect = 4e-19 Identities = 146/203 (72%), Gaps = 0/203 (0%) Strand=Plus/Minus Query 14974 TGAAGGGTAGAATCTTTTTGTATGTTGTAATCGCTGAGAATTCTCGCGTCTTCTAATTGT 15033 || ||||| || ||||| || || ||||| ||| ||| | | |||| |||| ||| Sbjct 24477364 TGGAGGGTTGATTCTTTCTGGATATTGTAGTCGGCGAGGGTGCGACCGTCCTCTAGCTGT 24477305 Query 15034 TTGCCAGCGTATATCAAACGCTGTTGGTCGTTTGGAATTCCTTCCTTGTCACAAATTTTG 15093 || || ||| | |||| |||||| ||||| |||||||||||||||||| ||| || Sbjct 24477304 TTTCCGGCGAAGATCAGACGCTGCTGGTCAGGTGGAATTCCTTCCTTGTCCTGAATCTTA 24477245 Query 15094 CTTTTTACAATTTCTATAGTATCGCTATTTTCTACGTCTAAGGTAATGGTTTTACCTGTC 15153 |||||| | || || || ||| | || || |||| ||| ||||| || || || Sbjct 24477244 GCTTTTACGTTATCGATTGTGTCGGAGCTCTCCACCTCTAGGGTGATGGTCTTTCCGGTT 24477185 Query 15154 AGAGTTTTTACAAAAATTTGCAT 15176 || ||||| || || |||||||| Sbjct 24477184 AGGGTTTTCACGAAGATTTGCAT 24477162 Score = 109 bits (120), Expect = 4e-19 Identities = 148/204 (73%), Gaps = 2/204 (1%) Strand=Plus/Minus Query 14974 TGAAGGGTAGAATCTTTTTGTATGTTGTAATC-GCTGAGAATTCTCGCGTCTTCTAATTG 15032 ||||| || || || || || || || ||||| ||| || |||| | ||||| | ||| Sbjct 24477592 TGAAGTGTTGATTCCTTCTGGATATTATAATCAGCT-AGGGTTCTTCCATCTTCAAGTTG 24477534 Query 15033 TTTGCCAGCGTATATCAAACGCTGTTGGTCGTTTGGAATTCCTTCCTTGTCACAAATTTT 15092 ||| |||||| | ||||| | ||| || || ||||||||||||||| || ||| || Sbjct 24477533 TTTTCCAGCGAAAATCAATCTCTGCTGATCTGGTGGAATTCCTTCCTTATCTTGAATCTT 24477474 Query 15093 GCTTTTTACAATTTCTATAGTATCGCTATTTTCTACGTCTAAGGTAATGGTTTTACCTGT 15152 ||||| | || || || ||| | | || || |||| ||| |||||||| || || Sbjct 24477473 CGCCTTTACGTTGTCGATGGTGTCGGAACTCTCCACTTCTAGGGTTATGGTTTTGCCGGT 24477414 Query 15153 CAGAGTTTTTACAAAAATTTGCAT 15176 || |||||||| || |||||||| Sbjct 24477413 GAGGGTTTTTACGAAGATTTGCAT 24477390 Score = 105 bits (116), Expect = 5e-18 Identities = 145/203 (71%), Gaps = 0/203 (0%) Strand=Plus/Minus Query 14974 TGAAGGGTAGAATCTTTTTGTATGTTGTAATCGCTGAGAATTCTCGCGTCTTCTAATTGT 15033 ||||| ||||| || || || || || ||||| | | | || | ||||||||||| Sbjct 24477820 TGAAGAGTAGACTCCTTCTGAATATTATAATCAGCCAAAGTCCTTCCATCTTCTAATTGC 24477761 Query 15034 TTGCCAGCGTATATCAAACGCTGTTGGTCGTTTGGAATTCCTTCCTTGTCACAAATTTTG 15093 || || || | ||||| | ||| || || |||||| |||||||| || ||| || Sbjct 24477760 TTCCCTGCAAAAATCAACCTCTGCTGATCCGGTGGAATACCTTCCTTATCCTGAATCTTA 24477701 Query 15094 CTTTTTACAATTTCTATAGTATCGCTATTTTCTACGTCTAAGGTAATGGTTTTACCTGTC 15153 ||| ||| | || || ||||| | |||| || || || ||||||||||| || ||| Sbjct 24477700 GCTTTCACATTATCAATTGTATCAGAACTTTCCACCTCCAAAGTAATGGTTTTCCCAGTC 24477641 Query 15154 AGAGTTTTTACAAAAATTTGCAT 15176 | ||| || |||||||| ||||| Sbjct 24477640 AAAGTCTTCACAAAAATCTGCAT 24477618 Score = 100 bits (110), Expect = 2e-16 Identities = 144/203 (71%), Gaps = 0/203 (0%) Strand=Plus/Minus Query 14974 TGAAGGGTAGAATCTTTTTGTATGTTGTAATCGCTGAGAATTCTCGCGTCTTCTAATTGT 15033 ||||||||||| || || || ||||| || || ||| | || | ||||| | ||| Sbjct 3994197 TGAAGGGTAGACTCCTTCTGGATGTTATAGTCAGCAAGAGTCCTTCCATCTTCGAGTTGC 3994138 Query 15034 TTGCCAGCGTATATCAAACGCTGTTGGTCGTTTGGAATTCCTTCCTTGTCACAAATTTTG 15093 || ||||| | ||||| | ||| ||||| ||||| ||||||||||| || ||| Sbjct 3994137 TTACCAGCAAAAATCAACCTCTGCTGGTCTGGGGGAATCCCTTCCTTGTCCTGGATCTTG 3994078 Query 15094 CTTTTTACAATTTCTATAGTATCGCTATTTTCTACGTCTAAGGTAATGGTTTTACCTGTC 15153 || ||| | || || |||||| | || || || | ||||||||| || ||||| Sbjct 3994077 GCCTTCACATTATCGATGGTATCGGAGCTCTCAACCTCGAGGGTAATGGTCTTTCCTGTA 3994018 Query 15154 AGAGTTTTTACAAAAATTTGCAT 15176 || || || |||||||| ||||| Sbjct 3994017 AGGGTCTTCACAAAAATCTGCAT 3993995 Score = 100 bits (110), Expect = 2e-16 Identities = 146/204 (72%), Gaps = 2/204 (1%) Strand=Plus/Minus Query 14974 TGAAGGGTAGAATCTTTTTGTATGTTGTAATC-GCTGAGAATTCTCGCGTCTTCTAATTG 15032 |||||||| || || || || || ||||| || ||| || | || | ||||| | ||| Sbjct 3994425 TGAAGGGTTGATTCCTTCTGAATATTGTAGTCAGCTAAGG-TCCTTCCATCTTCCAGTTG 3994367 Query 15033 TTTGCCAGCGTATATCAAACGCTGTTGGTCGTTTGGAATTCCTTCCTTGTCACAAATTTT 15092 || ||||| | ||||| | ||| || || || |||||||||||||| |||||| Sbjct 3994366 CTTACCAGCAAAGATCAACCTCTGCTGATCTGGGGGGATTCCTTCCTTGTCCTGAATTTT 3994307 Query 15093 GCTTTTTACAATTTCTATAGTATCGCTATTTTCTACGTCTAAGGTAATGGTTTTACCTGT 15152 | || ||| | || || |||||| | | || || || | |||||||| || || || Sbjct 3994306 GGCCTTCACATTATCAATGGTATCGGAACTCTCAACCTCAAGAGTAATGGTCTTCCCAGT 3994247 Query 15153 CAGAGTTTTTACAAAAATTTGCAT 15176 || || || |||||||||||||| Sbjct 3994246 CAAGGTCTTCACAAAAATTTGCAT 3994223 Score = 91.5 bits (100), Expect = 1e-13 Identities = 142/203 (70%), Gaps = 0/203 (0%) Strand=Plus/Minus Query 14974 TGAAGGGTAGAATCTTTTTGTATGTTGTAATCGCTGAGAATTCTCGCGTCTTCTAATTGT 15033 || ||||| || || || || |||||||| ||| ||| | | ||||||| | ||| Sbjct 22406913 TGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGGCGAGGGTGCGACCGTCTTCGAGCTGT 22406854 Query 15034 TTGCCAGCGTATATCAAACGCTGTTGGTCGTTTGGAATTCCTTCCTTGTCACAAATTTTG 15093 || || ||| | || | || || ||||| |||||||||||||||||| || ||| Sbjct 22406853 TTTCCGGCGAAGATGAGGCGTTGCTGGTCCGGTGGAATTCCTTCCTTGTCTTGGATCTTG 22406794 Query 15094 CTTTTTACAATTTCTATAGTATCGCTATTTTCTACGTCTAAGGTAATGGTTTTACCTGTC 15153 || ||| | || || || ||| | ||| || || | ||| || || ||||| || Sbjct 22406793 GCCTTCACATTGTCGATTGTGTCGGAAGATTCAACCTCAAGGGTTATCGTCTTACCCGTT 22406734 Query 15154 AGAGTTTTTACAAAAATTTGCAT 15176 || ||||| || ||||| ||||| Sbjct 22406733 AGGGTTTTCACGAAAATCTGCAT 22406711 >seq17 Length=21299880 Score = 96.9 bits (106), Expect = 2e-15 Identities = 143/203 (70%), Gaps = 0/203 (0%) Strand=Plus/Minus Query 14974 TGAAGGGTAGAATCTTTTTGTATGTTGTAATCGCTGAGAATTCTCGCGTCTTCTAATTGT 15033 || ||||| || || || || |||||||| ||| ||| | | ||||||| | ||| Sbjct 4985017 TGGAGGGTTGATTCCTTCTGGATGTTGTAGTCGGCGAGGGTGCGACCGTCTTCAAGCTGT 4984958 Query 15034 TTGCCAGCGTATATCAAACGCTGTTGGTCGTTTGGAATTCCTTCCTTGTCACAAATTTTG 15093 || || ||| | || | |||||| ||||| ||| |||||||||||||| || ||| Sbjct 4984957 TTTCCGGCGAAGATGAGACGCTGCTGGTCCGGTGGGATTCCTTCCTTGTCTTGGATCTTG 4984898 Query 15094 CTTTTTACAATTTCTATAGTATCGCTATTTTCTACGTCTAAGGTAATGGTTTTACCTGTC 15153 || ||| | || || |||||| ||| || || | ||| |||||||| || || Sbjct 4984897 GCCTTGACATTGTCGATGGTATCGGAGGATTCAACTTCGAGGGTGATGGTTTTCCCCGTT 4984838 Query 15154 AGAGTTTTTACAAAAATTTGCAT 15176 || ||||| || || || ||||| Sbjct 4984837 AGGGTTTTCACGAAGATCTGCAT 4984815 >seq3 Length=30153019 Score = 96.9 bits (106), Expect = 2e-15 Identities = 143/203 (70%), Gaps = 0/203 (0%) Strand=Plus/Plus Query 14974 TGAAGGGTAGAATCTTTTTGTATGTTGTAATCGCTGAGAATTCTCGCGTCTTCTAATTGT 15033 || ||||| || || || || |||||||| ||| ||| | | ||||||| | ||| Sbjct 15142517 TGGAGGGTTGATTCCTTCTGGATGTTGTAGTCGGCGAGGGTGCGACCGTCTTCAAGCTGT 15142576 Query 15034 TTGCCAGCGTATATCAAACGCTGTTGGTCGTTTGGAATTCCTTCCTTGTCACAAATTTTG 15093 || || ||| | || | |||||| ||||| ||| |||||||||||||| || ||| Sbjct 15142577 TTTCCGGCGAAGATGAGACGCTGCTGGTCCGGTGGGATTCCTTCCTTGTCTTGGATCTTG 15142636 Query 15094 CTTTTTACAATTTCTATAGTATCGCTATTTTCTACGTCTAAGGTAATGGTTTTACCTGTC 15153 || ||| | || || |||||| ||| || || | ||| |||||||| || || Sbjct 15142637 GCCTTGACATTGTCGATGGTATCGGAGGATTCAACTTCGAGGGTGATGGTTTTCCCCGTT 15142696 Query 15154 AGAGTTTTTACAAAAATTTGCAT 15176 || ||||| || || || ||||| Sbjct 15142697 AGGGTTTTCACGAAGATCTGCAT 15142719 >seq6 Length=33111450 Score = 93.3 bits (102), Expect = 3e-14 Identities = 147/211 (70%), Gaps = 0/211 (0%) Strand=Plus/Minus Query 14974 TGAAGGGTAGAATCTTTTTGTATGTTGTAATCGCTGAGAATTCTCGCGTCTTCTAATTGT 15033 || ||||| || || || || || ||||||||| ||| | | |||| || | ||| Sbjct 5099848 TGGAGGGTTGATTCCTTCTGGATATTGTAATCGGCGAGGGTGCGGCCGTCCTCAAGTTGC 5099789 Query 15034 TTGCCAGCGTATATCAAACGCTGTTGGTCGTTTGGAATTCCTTCCTTGTCACAAATTTTG 15093 || || ||| | |||| ||||| ||||| ||| |||||||||||||| || ||| Sbjct 5099788 TTTCCGGCGAAGATCAGTCGCTGCTGGTCCGGTGGGATTCCTTCCTTGTCCTGGATCTTG 5099729 Query 15094 CTTTTTACAATTTCTATAGTATCGCTATTTTCTACGTCTAAGGTAATGGTTTTACCTGTC 15153 || ||| | || || || || || || || | ||| ||||||||||| || Sbjct 5099728 GCCTTGACATTGTCGATGGTGTCAGAGGACTCAACCTCGAGGGTTATGGTTTTACCCGTT 5099669 Query 15154 AGAGTTTTTACAAAAATTTGCATATTTGAAA 15184 || ||||| ||||| || ||||| || |||| Sbjct 5099668 AGGGTTTTCACAAAGATCTGCATCTTCGAAA 5099638 >seq12525 Length=279716 Score = 91.5 bits (100), Expect = 1e-13 Identities = 144/204 (71%), Gaps = 2/204 (1%) Strand=Plus/Minus Query 14974 TGAAGGGTAGAATCTTTTTGTATGTTGTAATCGCTGAGAATTCTCGCGTCTTCTAATTGT 15033 |||||||| || || || || |||||||| || || | || | ||||| | || Sbjct 230679 TGAAGGGTGGACTCCTTCTGAATGTTGTAGTCAGCAAGGGTCCTTCCATCTTCAAGCTGC 230620 Query 15034 TTGCCAGCGTATATCAAACGCTGTTGGTCGTTTGGAATTCCTTCCTTGTCACAAAT-TTT 15092 || ||||| | ||||| | ||||||||| || ||||||||||| || ||| ||| Sbjct 230619 TTTCCAGCAAAGATCAACCTCTGTTGGTCTGGGGGGATTCCTTCCTTATCCTGAATCTTT 230560 Query 15093 GCTTTTTACAATTTCTATAGTATCGCTATTTTCTACGTCTAAGGTAATGGTTTTACCTGT 15152 || || ||| | || |||||||| | | || || || | ||||| ||||| || || Sbjct 230559 GC-CTTCACATTATCAATAGTATCCGAACTCTCAACCTCAAGAGTAATAGTTTTCCCAGT 230501 Query 15153 CAGAGTTTTTACAAAAATTTGCAT 15176 || || || |||||||| ||||| Sbjct 230500 CAAGGTCTTCACAAAAATCTGCAT 230477 >seq19 Length=18159812 Score = 89.7 bits (98), Expect = 4e-13 Identities = 148/211 (70%), Gaps = 2/211 (1%) Strand=Plus/Minus Query 14968 ACTAAATGAAGGGTAGAATCTTTTTGTATGTTGTAATC-GCTGAGAATTCTCGCGTCTTC 15026 || ||||||||||| || || ||||| ||||| || || ||| || | | | | || || Sbjct 4941326 ACCAAATGAAGGGTGGACTCCTTTTGGATGTTATAGTCTGCT-AGGGTACGCCCATCCTC 4941268 Query 15027 TAATTGTTTGCCAGCGTATATCAAACGCTGTTGGTCGTTTGGAATTCCTTCCTTGTCACA 15086 | || ||||||||| | || | |||||| ||||| || || |||||||| || Sbjct 4941267 AAGCTGCTTGCCAGCGAAGATGAGACGCTGCTGGTCCGGAGGGATACCTTCCTTATCCTG 4941208 Query 15087 AATTTTGCTTTTTACAATTTCTATAGTATCGCTATTTTCTACGTCTAAGGTAATGGTTTT 15146 || ||| || ||| | || || || || | | ||||| || || || || || || Sbjct 4941207 GATCTTGGCCTTCACATTGTCGATTGTGTCCGAACTCTCTACCTCCAAAGTGATTGTCTT 4941148 Query 15147 ACCTGTCAGAGTTTTTACAAAAATTTGCATA 15177 || || ||||| || |||||||| |||||| Sbjct 4941147 GCCAGTAAGAGTCTTCACAAAAATCTGCATA 4941117 >seq20 Length=21988590 Score = 84.2 bits (92), Expect = 2e-11 Identities = 142/206 (69%), Gaps = 0/206 (0%) Strand=Plus/Plus Query 14974 TGAAGGGTAGAATCTTTTTGTATGTTGTAATCGCTGAGAATTCTCGCGTCTTCTAATTGT 15033 || ||||| || || || || |||||||| ||| ||| | | ||||||| | ||| Sbjct 4225113 TGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGGCGAGGGTGCGACCGTCTTCCAGTTGC 4225172 Query 15034 TTGCCAGCGTATATCAAACGCTGTTGGTCGTTTGGAATTCCTTCCTTGTCACAAATTTTG 15093 || || ||| | || | ||||| ||||| ||| |||||||||||||| ||| ||| Sbjct 4225173 TTTCCGGCGAAGATGAGGCGCTGCTGGTCCGGTGGGATTCCTTCCTTGTCCTGAATCTTG 4225232 Query 15094 CTTTTTACAATTTCTATAGTATCGCTATTTTCTACGTCTAAGGTAATGGTTTTACCTGTC 15153 || ||| | || || || || ||| || || | ||| || ||||| || || Sbjct 4225233 GCCTTCACATTGTCAATTGTGTCTGAGGATTCAACCTCGAGGGTTATTGTTTTCCCAGTT 4225292 Query 15154 AGAGTTTTTACAAAAATTTGCATATT 15179 || ||||| || || || ||||| || Sbjct 4225293 AGGGTTTTCACGAAGATCTGCATCTT 4225318 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 357332879880305