Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lupinus_20angustifolius_20[refseq_20GCF_5F001865875.1_202016-11-16] 13,573 sequences; 609,203,021 total letters Query= NC_012639.1 Length=141291 Score E Sequences producing significant alignments: (Bits) Value seq4 170 2e-37 seq6 123 2e-23 seq18 120 3e-22 seq12525 114 1e-20 seq19 113 4e-20 seq17 107 2e-18 seq3 107 2e-18 seq9639 98.7 9e-16 seq20 91.5 1e-13 seq5 87.8 2e-12 >seq4 Length=27333975 Score = 170 bits (188), Expect = 2e-37 Identities = 180/232 (78%), Gaps = 4/232 (2%) Strand=Plus/Minus Query 45111 ATTCCTCCGCGGAGCCTCAACACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATC- 45169 || ||||| | ||||||||||| || || || ||||||||||| |||||||||||||| Sbjct 24477619 ATCCCTCCCCTAAGCCTCAACACAAGGTGAAGTGTTGATTCCTTCTGGATATTATAATCA 24477560 Query 45170 GCTGACGGTTTTAGAATCGTCCAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGG 45229 ||| | |||| | ||| || | ||||||||| ||| | ||||||| ||||| || || Sbjct 24477559 GCT-AGGGTTCTTCCATCTTCAAGTTGTTTTCCAGCGAAAATCAATCTCTGCTGATCTGG 24477501 Query 45230 CGGAATGCCTTCTTTATCTTGAATTTTTTGTTTGATCGCT-TCTACGGTGTCGGAAGACT 45288 ||||| ||||| ||||||||||| || || | || | || | |||||||||| || Sbjct 24477500 TGGAATTCCTTCCTTATCTTGAATCTTCGCCTTTA-CGTTGTCGATGGTGTCGGAACTCT 24477442 Query 45289 CGACTTCGAGAGTAACCGTTTTGCCGGTTAGAGTTTTTACAAAAATTTGCAT 45340 | ||||| || || | ||||||||||| || |||||||| || |||||||| Sbjct 24477441 CCACTTCTAGGGTTATGGTTTTGCCGGTGAGGGTTTTTACGAAGATTTGCAT 24477390 Score = 107 bits (118), Expect = 2e-18 Identities = 161/229 (70%), Gaps = 0/229 (0%) Strand=Plus/Minus Query 45114 CCTCCGCGGAGCCTCAACACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCGCTG 45173 || |||||||| | | || || || || || || ||||| ||||| || || ||| | Sbjct 22406937 CCACCGCGGAGGCGGAGGACGAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGGCG 22406878 Query 45174 ACGGTTTTAGAATCGTCCAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGCGGA 45233 | ||| | || || | |||||||| ||| | || | |||||||||||||| ||| Sbjct 22406877 AGGGTGCGACCGTCTTCGAGCTGTTTTCCGGCGAAGATGAGGCGTTGCTGGTCCGGTGGA 22406818 Query 45234 ATGCCTTCTTTATCTTGAATTTTTTGTTTGATCGCTTCTACGGTGTCGGAAGACTCGACT 45293 || ||||| || ||||| || || || | || | ||||||||||| || || Sbjct 22406817 ATTCCTTCCTTGTCTTGGATCTTGGCCTTCACATTGTCGATTGTGTCGGAAGATTCAACC 22406758 Query 45294 TCGAGAGTAACCGTTTTGCCGGTTAGAGTTTTTACAAAAATTTGCATCG 45342 || || || | ||| || || ||||| ||||| || ||||| ||||||| Sbjct 22406757 TCAAGGGTTATCGTCTTACCCGTTAGGGTTTTCACGAAAATCTGCATCG 22406709 Score = 91.5 bits (100), Expect = 1e-13 Identities = 159/229 (69%), Gaps = 2/229 (1%) Strand=Plus/Minus Query 45113 TCCTCCGCGGAGCCTCAACACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATC-GC 45171 ||| || || || | || || || || || ||||||||||| || ||||| || || || Sbjct 3994450 TCCACCACGAAGACGCAGAACAAGGTGAAGGGTTGATTCCTTCTGAATATTGTAGTCAGC 3994391 Query 45172 TGACGGTTTTAGAATCGTCCAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGCG 45231 | | ||| | ||| |||| ||| || || || | ||||| | ||||| || || | Sbjct 3994390 T-AAGGTCCTTCCATCTTCCAGTTGCTTACCAGCAAAGATCAACCTCTGCTGATCTGGGG 3994332 Query 45232 GAATGCCTTCTTTATCTTGAATTTTTTGTTTGATCGCTTCTACGGTGTCGGAAGACTCGA 45291 | || ||||| || || |||||||| || | || | ||| |||||| ||| | Sbjct 3994331 GGATTCCTTCCTTGTCCTGAATTTTGGCCTTCACATTATCAATGGTATCGGAACTCTCAA 3994272 Query 45292 CTTCGAGAGTAACCGTTTTGCCGGTTAGAGTTTTTACAAAAATTTGCAT 45340 | || ||||||| || || || || | || || |||||||||||||| Sbjct 3994271 CCTCAAGAGTAATGGTCTTCCCAGTCAAGGTCTTCACAAAAATTTGCAT 3994223 Score = 86.0 bits (94), Expect = 6e-12 Identities = 145/210 (69%), Gaps = 0/210 (0%) Strand=Plus/Minus Query 45131 CACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCGCTGACGGTTTTAGAATCGTC 45190 ||| || || || || || ||||| ||||| || || || || ||| ||| || Sbjct 3993520 CACAAGGTGGAGTGTGGACTCCTTCTGGATGTTGTAGTCTGCGAGGGTGCGCCCATCCTC 3993461 Query 45191 CAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGCGGAATGCCTTCTTTATCTTG 45250 | ||| ||||| || | ||||| | |||||||| || ||||||||||| ||||| || Sbjct 3993460 GAGTTGCTTTCCAGCAAAGATCAACCTCTGCTGGTCTGGAGGAATGCCTTCCTTATCCTG 3993401 Query 45251 AATTTTTTGTTTGATCGCTTCTACGGTGTCGGAAGACTCGACTTCGAGAGTAACCGTTTT 45310 || || |||| || | ||||| || ||| || ||||| || | || || Sbjct 3993400 GATCTTAGCCTTGACATTATCGATAGTGTCAGAGCTCTCAACCTCGAGGGTGATAGTCTT 3993341 Query 45311 GCCGGTTAGAGTTTTTACAAAAATTTGCAT 45340 ||| || || ||||| ||||| |||||||| Sbjct 3993340 GCCTGTGAGGGTTTTCACAAAGATTTGCAT 3993311 Score = 86.0 bits (94), Expect = 6e-12 Identities = 145/210 (69%), Gaps = 0/210 (0%) Strand=Plus/Minus Query 45132 ACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCGCTGACGGTTTTAGAATCGTCC 45191 || || || || || || ||||| || ||||||||||| | || | ||| || Sbjct 24477826 ACAAGGTGAAGAGTAGACTCCTTCTGAATATTATAATCAGCCAAAGTCCTTCCATCTTCT 24477767 Query 45192 AATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGCGGAATGCCTTCTTTATCTTGA 45251 ||||| || ||||| | ||||| | ||||| ||||| ||||| ||||| ||||| ||| Sbjct 24477766 AATTGCTTCCCTGCAAAAATCAACCTCTGCTGATCCGGTGGAATACCTTCCTTATCCTGA 24477707 Query 45252 ATTTTTTGTTTGATCGCTTCTACGGTGTCGGAAGACTCGACTTCGAGAGTAACCGTTTTG 45311 || || ||| | || | || || ||| || || || | ||||| ||||| Sbjct 24477706 ATCTTAGCTTTCACATTATCAATTGTATCAGAACTTTCCACCTCCAAAGTAATGGTTTTC 24477647 Query 45312 CCGGTTAGAGTTTTTACAAAAATTTGCATC 45341 || || | ||| || |||||||| |||||| Sbjct 24477646 CCAGTCAAAGTCTTCACAAAAATCTGCATC 24477617 >seq6 Length=33111450 Score = 123 bits (136), Expect = 2e-23 Identities = 164/228 (72%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 45114 CCTCCGCGGAGCCTCAACACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCGCTG 45173 || |||||||| | | || || || || ||||||||||| |||||||| |||||| | Sbjct 5099872 CCACCGCGGAGGCGGAGGACAAGGTGGAGGGTTGATTCCTTCTGGATATTGTAATCGGCG 5099813 Query 45174 ACGGTTTTAGAATCGTCCAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGCGGA 45233 | ||| || || | ||| ||||| ||| | |||| ||| ||||||||||| || Sbjct 5099812 AGGGTGCGGCCGTCCTCAAGTTGCTTTCCGGCGAAGATCAGTCGCTGCTGGTCCGGTGGG 5099753 Query 45234 ATGCCTTCTTTATCTTGAATTTTTTGTTTGATCGCTTCTACGGTGTCGGAAGACTCGACT 45293 || ||||| || || || || || |||| || | |||||| || ||||| || Sbjct 5099752 ATTCCTTCCTTGTCCTGGATCTTGGCCTTGACATTGTCGATGGTGTCAGAGGACTCAACC 5099693 Query 45294 TCGAGAGTAACCGTTTTGCCGGTTAGAGTTTTTACAAAAATTTGCATC 45341 ||||| || | ||||| || ||||| ||||| ||||| || |||||| Sbjct 5099692 TCGAGGGTTATGGTTTTACCCGTTAGGGTTTTCACAAAGATCTGCATC 5099645 >seq18 Length=16588007 Score = 120 bits (132), Expect = 3e-22 Identities = 164/229 (72%), Gaps = 0/229 (0%) Strand=Plus/Plus Query 45114 CCTCCGCGGAGCCTCAACACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCGCTG 45173 || |||||||| | | || || || || || || ||||| || ||||| |||||| | Sbjct 12189667 CCACCGCGGAGGCGGAGGACAAGGTGGAGGGTCGACTCCTTCTGAATATTGTAATCGGCG 12189726 Query 45174 ACGGTTTTAGAATCGTCCAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGCGGA 45233 | || | || || | ||||||||| ||| | ||||| || ||||||||||| ||| Sbjct 12189727 AGAGTGCGACCGTCTTCGAGTTGTTTTCCGGCGAAGATCAAACGCTGCTGGTCCGGTGGA 12189786 Query 45234 ATGCCTTCTTTATCTTGAATTTTTTGTTTGATCGCTTCTACGGTGTCGGAAGACTCGACT 45293 || ||||| || ||||| || || |||| || | ||| ||||| || || || Sbjct 12189787 ATTCCTTCCTTGTCTTGGATCTTGGCCTTGACATTGTCGATGGTATCGGAGGATTCAACC 12189846 Query 45294 TCGAGAGTAACCGTTTTGCCGGTTAGAGTTTTTACAAAAATTTGCATCG 45342 ||||| |||| ||||| || ||||| ||||| || || || ||||||| Sbjct 12189847 TCGAGGGTAATGGTTTTACCCGTTAGGGTTTTCACGAAGATCTGCATCG 12189895 >seq12525 Length=279716 Score = 114 bits (126), Expect = 1e-20 Identities = 166/232 (72%), Gaps = 2/232 (1%) Strand=Plus/Minus Query 45111 ATTCCTCCGCGGAGCCTCAACACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCG 45170 || || || ||||| | | || || || || || || ||||||||||| || || ||| Sbjct 229794 ATACCACCACGGAGACGGAGGACGAGGTGGAGAGTGGACTCCTTTTGGATGTTGTAGTCG 229735 Query 45171 CTGACGGTTTTAGAATCGTCCAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGC 45230 || ||| ||| || | ||||||||| || | || | |||||||| ||||| Sbjct 229734 GCGAGGGTGCGGCCATCTTCAAGTTGTTTTCCAGCAAAGATGAGACGTTGCTGATCCGGT 229675 Query 45231 GGAATGCCTTCTTTATCTTGAATTTTTTGTTTGATCGCT-TCTACGGTGTCGGAAGACTC 45289 || || ||||| || ||||| || || || | || | || | |||||| ||| ||| Sbjct 229674 GGGATCCCTTCCTTGTCTTGGATCTTAGCCTTAA-CGTTGTCAATGGTGTCAGAACTCTC 229616 Query 45290 GACTTCGAGAGTAACCGTTTTGCCGGTTAGAGTTTTTACAAAAATTTGCATC 45341 ||||||||||||| || |||||||| || || || ||||| ||||||||| Sbjct 229615 AACTTCGAGAGTAATGGTCTTGCCGGTGAGGGTCTTGACAAAGATTTGCATC 229564 >seq19 Length=18159812 Score = 113 bits (124), Expect = 4e-20 Identities = 165/231 (71%), Gaps = 2/231 (1%) Strand=Plus/Minus Query 45111 ATTCCTCCGCGGAGCCTCAACACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATC- 45169 ||||| || |||||||| | || ||||| || || ||||||||||| ||||| ||||| Sbjct 4557377 ATTCCACCACGGAGCCTAAGAACAAGATGAAGAGTAGATTCCTTTTGAATATTGTAATCA 4557318 Query 45170 GCTGACGGTTTTAGAATCGTCCAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGG 45229 ||| | |||| | ||| || | |||||| || ||| | ||||| ||||| || || || Sbjct 4557317 GCT-AGGGTTCTTCCATCTTCAAGTTGTTTACCAGCGAAAATCAAACGTTGTTGATCTGG 4557259 Query 45230 CGGAATGCCTTCTTTATCTTGAATTTTTTGTTTGATCGCTTCTACGGTGTCGGAAGACTC 45289 |||| |||||||||||||| || || ||| | || | ||||| || Sbjct 4557258 TGGAACTCCTTCTTTATCTTGGATCTTGGCTTTCACATTGTCGATTGTGTCACTGCTTTC 4557199 Query 45290 GACTTCGAGAGTAACCGTTTTGCCGGTTAGAGTTTTTACAAAAATTTGCAT 45340 ||||| || || | ||||| || ||||| ||||| || || || ||||| Sbjct 4557198 AACTTCTAGGGTTATTGTTTTACCCGTTAGGGTTTTCACGAAGATCTGCAT 4557148 >seq17 Length=21299880 Score = 107 bits (118), Expect = 2e-18 Identities = 161/229 (70%), Gaps = 0/229 (0%) Strand=Plus/Minus Query 45114 CCTCCGCGGAGCCTCAACACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCGCTG 45173 || || ||||| | | || || || || ||||||||||| ||||| || || ||| | Sbjct 4985041 CCACCACGGAGGCGGAGGACAAGGTGGAGGGTTGATTCCTTCTGGATGTTGTAGTCGGCG 4984982 Query 45174 ACGGTTTTAGAATCGTCCAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGCGGA 45233 | ||| | || || | |||||||| ||| | || | || ||||||||||| || Sbjct 4984981 AGGGTGCGACCGTCTTCAAGCTGTTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGTGGG 4984922 Query 45234 ATGCCTTCTTTATCTTGAATTTTTTGTTTGATCGCTTCTACGGTGTCGGAAGACTCGACT 45293 || ||||| || ||||| || || |||| || | ||| ||||| || || ||| Sbjct 4984921 ATTCCTTCCTTGTCTTGGATCTTGGCCTTGACATTGTCGATGGTATCGGAGGATTCAACT 4984862 Query 45294 TCGAGAGTAACCGTTTTGCCGGTTAGAGTTTTTACAAAAATTTGCATCG 45342 ||||| || | ||||| || ||||| ||||| || || || ||||||| Sbjct 4984861 TCGAGGGTGATGGTTTTCCCCGTTAGGGTTTTCACGAAGATCTGCATCG 4984813 >seq3 Length=30153019 Score = 107 bits (118), Expect = 2e-18 Identities = 161/229 (70%), Gaps = 0/229 (0%) Strand=Plus/Plus Query 45114 CCTCCGCGGAGCCTCAACACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCGCTG 45173 || || ||||| | | || || || || ||||||||||| ||||| || || ||| | Sbjct 15142493 CCACCACGGAGGCGGAGGACAAGGTGGAGGGTTGATTCCTTCTGGATGTTGTAGTCGGCG 15142552 Query 45174 ACGGTTTTAGAATCGTCCAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGCGGA 45233 | ||| | || || | |||||||| ||| | || | || ||||||||||| || Sbjct 15142553 AGGGTGCGACCGTCTTCAAGCTGTTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGTGGG 15142612 Query 45234 ATGCCTTCTTTATCTTGAATTTTTTGTTTGATCGCTTCTACGGTGTCGGAAGACTCGACT 45293 || ||||| || ||||| || || |||| || | ||| ||||| || || ||| Sbjct 15142613 ATTCCTTCCTTGTCTTGGATCTTGGCCTTGACATTGTCGATGGTATCGGAGGATTCAACT 15142672 Query 45294 TCGAGAGTAACCGTTTTGCCGGTTAGAGTTTTTACAAAAATTTGCATCG 45342 ||||| || | ||||| || ||||| ||||| || || || ||||||| Sbjct 15142673 TCGAGGGTGATGGTTTTCCCCGTTAGGGTTTTCACGAAGATCTGCATCG 15142721 >seq9639 Length=114074 Score = 98.7 bits (108), Expect = 9e-16 Identities = 101/132 (77%), Gaps = 0/132 (0%) Strand=Plus/Minus Query 45111 ATTCCTCCGCGGAGCCTCAACACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCG 45170 || || ||||| ||||| | || ||||| || || ||||||||||||||||| ||||| Sbjct 59123 ATGCCACCGCGAAGCCTGAGTACAAGATGAAGAGTGGATTCCTTTTGGATATTGTAATCA 59064 Query 45171 CTGACGGTTTTAGAATCGTCCAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGC 45230 | ||| | ||| ||||| || ||||| ||| |||||||||| ||||| ||||| Sbjct 59063 GCCAATGTTCTTCCATCCTCCAACTGCTTTCCAGCGAATATCAATCGCTGCTGATCCGGT 59004 Query 45231 GGAATGCCTTCT 45242 ||||| ||| || Sbjct 59003 GGAATTCCTGCT 58992 >seq20 Length=21988590 Score = 91.5 bits (100), Expect = 1e-13 Identities = 157/228 (69%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 45114 CCTCCGCGGAGCCTCAACACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCGCTG 45173 || |||||||| | | || || || || || || ||||| ||||| || || ||| | Sbjct 4225089 CCGCCGCGGAGGCGGAGGACGAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGGCG 4225148 Query 45174 ACGGTTTTAGAATCGTCCAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGCGGA 45233 | ||| | || |||| ||| ||||| ||| | || | || ||||||||||| || Sbjct 4225149 AGGGTGCGACCGTCTTCCAGTTGCTTTCCGGCGAAGATGAGGCGCTGCTGGTCCGGTGGG 4225208 Query 45234 ATGCCTTCTTTATCTTGAATTTTTTGTTTGATCGCTTCTACGGTGTCGGAAGACTCGACT 45293 || ||||| || || ||||| || || | || | ||||| || || || || Sbjct 4225209 ATTCCTTCCTTGTCCTGAATCTTGGCCTTCACATTGTCAATTGTGTCTGAGGATTCAACC 4225268 Query 45294 TCGAGAGTAACCGTTTTGCCGGTTAGAGTTTTTACAAAAATTTGCATC 45341 ||||| || | ||||| || ||||| ||||| || || || |||||| Sbjct 4225269 TCGAGGGTTATTGTTTTCCCAGTTAGGGTTTTCACGAAGATCTGCATC 4225316 >seq5 Length=26376911 Score = 87.8 bits (96), Expect = 2e-12 Identities = 146/211 (69%), Gaps = 0/211 (0%) Strand=Plus/Plus Query 45131 CACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCGCTGACGGTTTTAGAATCGTC 45190 ||| | ||| || || || ||||||||||| || ||||| | ||| ||| || Sbjct 2894397 CACCAAATGGAGGGTGGACTCCTTTTGGATGTTGTAATCAGCAAGGGTACGCCCATCCTC 2894456 Query 45191 CAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGCGGAATGCCTTCTTTATCTTG 45250 | ||| || || || | || | || || ||||| || || || ||||| || ||||| Sbjct 2894457 AAGTTGCTTGCCAGCAAAAATGAGACGCTGTTGGTCTGGTGGGATCCCTTCCTTGTCTTG 2894516 Query 45251 AATTTTTTGTTTGATCGCTTCTACGGTGTCGGAAGACTCGACTTCGAGAGTAACCGTTTT 45310 |||||| || | |||| ||| || ||| ||| ||||||||||| | || || Sbjct 2894517 AATTTTAGCCTTTACATTATCTATGGTATCAGAACTCTCAACTTCGAGAGTGATGGTCTT 2894576 Query 45311 GCCGGTTAGAGTTTTTACAAAAATTTGCATC 45341 ||| || || || || ||||| ||||||||| Sbjct 2894577 GCCAGTGAGTGTCTTAACAAAGATTTGCATC 2894607 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 451926512007080