Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Lupinus_20angustifolius_20[refseq_20GCF_5F001865875.1_202016-11-16]
13,573 sequences; 609,203,021 total letters
Query= NC_013288.1
Length=191761
Score E
Sequences producing significant alignments: (Bits) Value
seq2 109 7e-19
seq16 91.5 2e-13
seq11 89.7 6e-13
>seq2
Length=24697652
Score = 109 bits (120), Expect = 7e-19
Identities = 114/150 (76%), Gaps = 0/150 (0%)
Strand=Plus/Plus
Query 127531 GTGGAGACCCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGACCTGGCATGAGACC 127590
||| | |||||| || || ||||| | || || |||||| ||||| ||||| || ||
Sbjct 21046927 GTGTAAACCCTCATCTCGCGAGATTAACTCGTTTGAGAAGGTAAGACCAGGCATAAGGCC 21046986
Query 127591 CCGCTTCTTCAACCAGAAAATCGCACAAAATGAGCCAGAGAAGAAGATCCCCTCCACACA 127650
|| ||||||||||| || |||||||| || ||||||||||| || || || |||||
Sbjct 21046987 TCGTTTCTTCAACCAAAATATCGCACAGAAGCTTCCAGAGAAGAAAATACCTTCAACACA 21047046
Query 127651 CGCGAACGCAAATAGACGCTCGGCAAAGGA 127680
|| ||||||| ||||| || || |||||
Sbjct 21047047 AGCAAACGCAACGAGACGTTCAGCGAAGGA 21047076
>seq16
Length=20786881
Score = 91.5 bits (100), Expect = 2e-13
Identities = 228/338 (67%), Gaps = 10/338 (3%)
Strand=Plus/Plus
Query 12734 GTCAAGGATATCAATGCGGTTCGTCGCCGCGATGACAACGATGCCCGTCTCGTTATCGAA 12793
|||||| || ||| | ||| || || || || |||| || || || | || ||
Sbjct 9801843 GTCAAGAATGTCAGCTCTGTTAGTTGCTGCAATCACAATGACACCGGTATTACCCTCAAA 9801902
Query 12794 GCCATCCATCTCAGTCAAGAGTTGATTGATGGTTTGTTCACGTTCATCATTCGCGGGCAT 12853
|||||||| || ||||| ||||| || | ||||||||| | |||||| ||| | ||
Sbjct 9801903 CCCATCCATTTCTGTCAAAAGTTGGTTAAGGGTTTGTTCTCTTTCATCGTTCCCTC-CAC 9801961
Query 12854 ACCA--CCCGCACTGCGTTGCTTACCGACGGCGTCAATTTCGTCAATGAAAACGATACAC 12911
||| || | || | |||| | || || ||||||||||| |||| ||||| || ||
Sbjct 9801962 -CCATTCCAGTACCTCTTTGCCTTCCAACAGCGTCAATTTCATCAACAAAAACAATGCAA 9802020
Query 12912 GGTTGATTTTCACGGGCAACTTCA--AAGATATCTCGCACTCTCTTGGCACCGACACCCA 12969
|| ||| || ||| |||| || | ||| || |||| ||||| ||||| |
Sbjct 9802021 GGAGAATTCTCTTTGGC--CTTCTTGAATAAATCACGGACTCGAGAAGCACCAACACCAA 9802078
Query 12970 CAAACATCTCCACAAAATTGGCGGCGGAACATTG-GATGAAGGGGACGTTGGATTCACCC 13028
|||||||||| ||||| | | | | | |||| || || ||||| | ||||||
Sbjct 9802079 CAAACATCTCAACAAACTCAGAACCCG-AGATTGAGAAAAAAGGGACACCTGCTTCACCA 9802137
Query 13029 GCGATGGCTCGGGCGAGGAGGGTCTTCCCCGTCCCTGG 13066
|| || || || | || |||||||| || |||||
Sbjct 9802138 GCAATAGCCTTCGCTAATAGCGTCTTCCCAGTTCCTGG 9802175
>seq11
Length=35963958
Score = 89.7 bits (98), Expect = 6e-13
Identities = 109/149 (73%), Gaps = 0/149 (0%)
Strand=Plus/Minus
Query 127532 TGGAGACCCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGACCTGGCATGAGACCC 127591
|| || || || || || || || | || || |||||| || || ||||| |||||
Sbjct 2850718 TGAAGCCCTTCATCTCGCGATATCAACTCGTTTGAGAAGGTAAGTCCAGGCATAAGACCT 2850659
Query 127592 CGCTTCTTCAACCAGAAAATCGCACAAAATGAGCCAGAGAAGAAGATCCCCTCCACACAC 127651
| |||||| | |||||| || ||||| || ||||||||||| || || || |||||
Sbjct 2850658 CTCTTCTTAAGCCAGAATATAGCACAGAAGCTTCCAGAGAAGAAAATTCCTTCAACACAA 2850599
Query 127652 GCGAACGCAAATAGACGCTCGGCAAAGGA 127680
|| ||||||| || ||||| || |||||
Sbjct 2850598 GCAAACGCAACAAGGCGCTCAGCGAAGGA 2850570
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 613403110834680
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |