Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lupinus_20angustifolius_20[refseq_20GCF_5F001865875.1_202016-11-16] 13,573 sequences; 609,203,021 total letters Query= NC_013288.1 Length=191761 Score E Sequences producing significant alignments: (Bits) Value seq2 109 7e-19 seq16 91.5 2e-13 seq11 89.7 6e-13 >seq2 Length=24697652 Score = 109 bits (120), Expect = 7e-19 Identities = 114/150 (76%), Gaps = 0/150 (0%) Strand=Plus/Plus Query 127531 GTGGAGACCCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGACCTGGCATGAGACC 127590 ||| | |||||| || || ||||| | || || |||||| ||||| ||||| || || Sbjct 21046927 GTGTAAACCCTCATCTCGCGAGATTAACTCGTTTGAGAAGGTAAGACCAGGCATAAGGCC 21046986 Query 127591 CCGCTTCTTCAACCAGAAAATCGCACAAAATGAGCCAGAGAAGAAGATCCCCTCCACACA 127650 || ||||||||||| || |||||||| || ||||||||||| || || || ||||| Sbjct 21046987 TCGTTTCTTCAACCAAAATATCGCACAGAAGCTTCCAGAGAAGAAAATACCTTCAACACA 21047046 Query 127651 CGCGAACGCAAATAGACGCTCGGCAAAGGA 127680 || ||||||| ||||| || || ||||| Sbjct 21047047 AGCAAACGCAACGAGACGTTCAGCGAAGGA 21047076 >seq16 Length=20786881 Score = 91.5 bits (100), Expect = 2e-13 Identities = 228/338 (67%), Gaps = 10/338 (3%) Strand=Plus/Plus Query 12734 GTCAAGGATATCAATGCGGTTCGTCGCCGCGATGACAACGATGCCCGTCTCGTTATCGAA 12793 |||||| || ||| | ||| || || || || |||| || || || | || || Sbjct 9801843 GTCAAGAATGTCAGCTCTGTTAGTTGCTGCAATCACAATGACACCGGTATTACCCTCAAA 9801902 Query 12794 GCCATCCATCTCAGTCAAGAGTTGATTGATGGTTTGTTCACGTTCATCATTCGCGGGCAT 12853 |||||||| || ||||| ||||| || | ||||||||| | |||||| ||| | || Sbjct 9801903 CCCATCCATTTCTGTCAAAAGTTGGTTAAGGGTTTGTTCTCTTTCATCGTTCCCTC-CAC 9801961 Query 12854 ACCA--CCCGCACTGCGTTGCTTACCGACGGCGTCAATTTCGTCAATGAAAACGATACAC 12911 ||| || | || | |||| | || || ||||||||||| |||| ||||| || || Sbjct 9801962 -CCATTCCAGTACCTCTTTGCCTTCCAACAGCGTCAATTTCATCAACAAAAACAATGCAA 9802020 Query 12912 GGTTGATTTTCACGGGCAACTTCA--AAGATATCTCGCACTCTCTTGGCACCGACACCCA 12969 || ||| || ||| |||| || | ||| || |||| ||||| ||||| | Sbjct 9802021 GGAGAATTCTCTTTGGC--CTTCTTGAATAAATCACGGACTCGAGAAGCACCAACACCAA 9802078 Query 12970 CAAACATCTCCACAAAATTGGCGGCGGAACATTG-GATGAAGGGGACGTTGGATTCACCC 13028 |||||||||| ||||| | | | | | |||| || || ||||| | |||||| Sbjct 9802079 CAAACATCTCAACAAACTCAGAACCCG-AGATTGAGAAAAAAGGGACACCTGCTTCACCA 9802137 Query 13029 GCGATGGCTCGGGCGAGGAGGGTCTTCCCCGTCCCTGG 13066 || || || || | || |||||||| || ||||| Sbjct 9802138 GCAATAGCCTTCGCTAATAGCGTCTTCCCAGTTCCTGG 9802175 >seq11 Length=35963958 Score = 89.7 bits (98), Expect = 6e-13 Identities = 109/149 (73%), Gaps = 0/149 (0%) Strand=Plus/Minus Query 127532 TGGAGACCCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGACCTGGCATGAGACCC 127591 || || || || || || || || | || || |||||| || || ||||| ||||| Sbjct 2850718 TGAAGCCCTTCATCTCGCGATATCAACTCGTTTGAGAAGGTAAGTCCAGGCATAAGACCT 2850659 Query 127592 CGCTTCTTCAACCAGAAAATCGCACAAAATGAGCCAGAGAAGAAGATCCCCTCCACACAC 127651 | |||||| | |||||| || ||||| || ||||||||||| || || || ||||| Sbjct 2850658 CTCTTCTTAAGCCAGAATATAGCACAGAAGCTTCCAGAGAAGAAAATTCCTTCAACACAA 2850599 Query 127652 GCGAACGCAAATAGACGCTCGGCAAAGGA 127680 || ||||||| || ||||| || ||||| Sbjct 2850598 GCAAACGCAACAAGGCGCTCAGCGAAGGA 2850570 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 613403110834680