Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lupinus_20angustifolius_20[refseq_20GCF_5F001865875.1_202016-11-16] 13,573 sequences; 609,203,021 total letters Query= NC_013797.1 Length=108592 Score E Sequences producing significant alignments: (Bits) Value seq4 107 1e-18 seq19 96.9 2e-15 >seq4 Length=27333975 Score = 107 bits (118), Expect = 1e-18 Identities = 160/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 39493 CCGCCTCGCAAACGCAGTACCAAATGCAAAGTGCTTTCTTTTTGTATATTATAATCGGCC 39552 || || |||| ||| || || | || | ||| || || || ||||||||||| ||| Sbjct 24477844 CCCCCACGCAGACGAAGAACAAGGTGAAGAGTAGACTCCTTCTGAATATTATAATCAGCC 24477785 Query 39553 AAAACGCGTTCATCGTCCAATTGTTTCCCGCCAAAAATTAAACGCTGCTGATCCGAGGGT 39612 ||| | | |||| || ||||| ||||| ||||||| || | ||||||||||| || Sbjct 24477784 AAAGTCCTTCCATCTTCTAATTGCTTCCCTGCAAAAATCAACCTCTGCTGATCCGGTGGA 24477725 Query 39613 ACGCCTTCTTTGTCGCATATTTTTTGTTTAATCGTCGCTACTGTGTCTGCGCTTTCCACG 39672 | ||||| || || || || ||| | | | | ||| || | |||||||| Sbjct 24477724 ATACCTTCCTTATCCTGAATCTTAGCTTTCACATTATCAATTGTATCAGAACTTTCCACC 24477665 Query 39673 TCCAAAGTAATTGTTTTACCCGTTAAAGTTTTTACGAAGATCTGCAT 39719 ||||||||||| ||||| || || ||||| || || || |||||||| Sbjct 24477664 TCCAAAGTAATGGTTTTCCCAGTCAAAGTCTTCACAAAAATCTGCAT 24477618 >seq19 Length=18159812 Score = 96.9 bits (106), Expect = 2e-15 Identities = 139/194 (72%), Gaps = 4/194 (2%) Strand=Plus/Minus Query 39528 TTCTTTTTGTATATTATAATCGGCCAAAACGCGTTCATCGTCCAATTGTTTCCCGCCAAA 39587 ||| ||||| ||||| ||||| || | | | |||| || | |||||| || | || Sbjct 4557339 TTCCTTTTGAATATTGTAATCAGCTAGGGTTCTTCCATCTTCAAGTTGTTTACCAGCGAA 4557280 Query 39588 AATTAAACGCTGCTGATCCGAGGGTACGCCTTCTTTGTCGCATATTTTTTGTTTAA--TC 39645 ||| ||||| || ||||| | || || |||||||| || || || ||| | | Sbjct 4557279 AATCAAACGTTGTTGATCTGGTGGAACTCCTTCTTTATCTTGGATCTTGGCTTTCACATT 4557220 Query 39646 GTCGCTACTGTGTCTGCGCTTTCCACGTCCAAAGTAATTGTTTTACCCGTTAAAGTTTTT 39705 |||| | |||||| |||||| || || | || |||||||||||||||| ||||| Sbjct 4557219 GTCGAT--TGTGTCACTGCTTTCAACTTCTAGGGTTATTGTTTTACCCGTTAGGGTTTTC 4557162 Query 39706 ACGAAGATCTGCAT 39719 |||||||||||||| Sbjct 4557161 ACGAAGATCTGCAT 4557148 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 347312137795109