Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lupinus_20angustifolius_20[refseq_20GCF_5F001865875.1_202016-11-16] 13,573 sequences; 609,203,021 total letters Query= NC_014766.1 Length=194022 Score E Sequences producing significant alignments: (Bits) Value seq2 118 1e-21 seq16 116 5e-21 seq15 113 6e-20 seq12 113 6e-20 seq11 111 2e-19 seq7 102 1e-16 seq17 86.0 8e-12 >seq2 Length=24697652 Score = 118 bits (130), Expect = 1e-21 Identities = 112/143 (78%), Gaps = 0/143 (0%) Strand=Plus/Minus Query 102171 TCCTTTGCTGAGCGACTCTTCGCATTTGCGTGTGTTGAGGGTATCTTCTTCTCTGGTTCC 102230 ||||| ||||| || ||| | || ||||| |||||||| ||||| ||||||||||| | Sbjct 21047076 TCCTTCGCTGAACGTCTCGTTGCGTTTGCTTGTGTTGAAGGTATTTTCTTCTCTGGAAGC 21047017 Query 102231 TTCTGCGCTATTTATTGGCTCAAGAAGCGAGGTCTCATGCCAGGTCTCTGCTTCTCCAAC 102290 ||||| || || | |||| | ||||| ||||| || ||||| ||||| |||||| ||| Sbjct 21047016 TTCTGTGCGATATTTTGGTTGAAGAAACGAGGCCTTATGCCTGGTCTTACCTTCTCAAAC 21046957 Query 102291 GAGCTTATCTCTCGTGACGAGGG 102313 ||| | ||||| || || ||||| Sbjct 21046956 GAGTTAATCTCGCGAGATGAGGG 21046934 >seq16 Length=20786881 Score = 116 bits (128), Expect = 5e-21 Identities = 232/337 (69%), Gaps = 10/337 (3%) Strand=Plus/Plus Query 15918 TCAAGGATATCAACGCGATTCGTTGCGGCGATGACAACAATACCTGTTTCGTTATCAAAA 15977 ||||| || ||| | | || ||||| || || |||| | ||| || | ||||| Sbjct 9801844 TCAAGAATGTCAGCTCTGTTAGTTGCTGCAATCACAATGACACCGGTATTACCCTCAAAC 9801903 Query 15978 CCATCCATCTCTGTCAAAAGCTGGTTAATAGTTTGTTCCCGTTCATCATTCGCTGGCATA 16037 |||||||| ||||||||||| ||||||| |||||||| | |||||| ||| || | Sbjct 9801904 CCATCCATTTCTGTCAAAAGTTGGTTAAGGGTTTGTTCTCTTTCATCGTTCCCT--CCAC 9801961 Query 16038 CCA--CCAGCACTGCGTTGCTTTCCCACGGCATCAATCTCATCAATGAAGACGATGCATG 16095 ||| |||| || | |||| |||| || || ||||| ||||||| || || ||||| | Sbjct 9801962 CCATTCCAGTACCTCTTTGCCTTCCAACAGCGTCAATTTCATCAACAAAAACAATGCAAG 9802021 Query 16096 GTTGATTTTCGCGAGCGACTTC--AAAGAGATCCCGTACACGCTTGGCGCCCACACCAAC 16153 | ||| || || |||| || | ||| || || || || || |||||||| Sbjct 9802022 GAGAATTCTCTTTGGC--CTTCTTGAATAAATCACGGACTCGAGAAGCACCAACACCAAC 9802079 Query 16154 AAACATCTCCACAAAGTTTGCGGCGGAACATTG-GATGAAGGGGACATTAGATTCACCCG 16212 ||||||||| ||||| | | | | | |||| || || |||||| | |||||| | Sbjct 9802080 AAACATCTCAACAAACTCAGAACCCG-AGATTGAGAAAAAAGGGACACCTGCTTCACCAG 9802138 Query 16213 CAATGGCTCGGGCGAGAAGAGTCTTACCCGTACCTGG 16249 |||| || || | || ||||| || || ||||| Sbjct 9802139 CAATAGCCTTCGCTAATAGCGTCTTCCCAGTTCCTGG 9802175 >seq15 Length=20964703 Score = 113 bits (124), Expect = 6e-20 Identities = 150/201 (75%), Gaps = 12/201 (6%) Strand=Plus/Minus Query 15974 AAAACCATCCATCTCTGTCAAAAGCTGGTTAATAGTTTGTTCCCGTTCATCATTCGCTGG 16033 ||| ||||||||||| ||||| | |||||||||||||||||||| ||||||||| | Sbjct 20643967 AAACCCATCCATCTCGGTCAATAACTGGTTAATAGTTTGTTCCCTCTCATCATTCCC--A 20643910 Query 16034 CATACC--ACCAGCACTGCGTTGCTTTCCCACGGCATCAATCTCATCAATGAAGACGATG 16091 | | || ||| |||| | ||| ||||||| |||||||| ||||| || || || ||| Sbjct 20643909 CCTCCCATACCTGCACCCCTTTGTCTTCCCACAGCATCAATTTCATCTATAAAAACAATG 20643850 Query 16092 CATGGTTGATTTTCGCGAGCGAC--TTCAAAGAGATCCCGTACACGCTTG--GCGCCCAC 16147 || || ||||| || | |||||| | ||| | || || |||| || || || Sbjct 20643849 CAAGG--CGCTTTCGACTTCGCCTTTTCAAACAAATCTC-TA-ACCCTTGAAGCACCAAC 20643794 Query 16148 ACCAACAAACATCTCCACAAA 16168 ||||||||||| |||||||| Sbjct 20643793 ACCAACAAACAATTCCACAAA 20643773 >seq12 Length=19065701 Score = 113 bits (124), Expect = 6e-20 Identities = 305/460 (66%), Gaps = 10/460 (2%) Strand=Plus/Plus Query 15918 TCAAGGATATCAACGCGATTCGTTGCGGCGATGACAACAATACCTGTTTCGTTATCAAAA 15977 ||||| || || | | || ||||| || | |||| ||||| || | ||||| Sbjct 8127069 TCAAGAATGTCGGCTCTGTTAGTTGCTGCAACAACAATGATACCAGTATTACCCTCAAAC 8127128 Query 15978 CCATCCATCTCTGTCAAAAGCTGGTTAATAGTTTGTTCCCGTTCATCATTCGCTGGCATA 16037 |||||||| ||||||||||| ||||| | || ||||| | |||||||||| || | | Sbjct 8127129 CCATCCATTTCTGTCAAAAGTTGGTTGAGGGTCTGTTCTCTTTCATCATTCCCT--CCTC 8127186 Query 16038 CCA--CCAGCACTGCGTTGCTTTCCCACGGCATCAATCTCATCAATGAAGACGATGCATG 16095 | | || | | | ||| |||| || |||||||| ||||||| ||| || || |||| Sbjct 8127187 CAATTCCGGTCCCTCTTTGTCTTCCAACAGCATCAATTTCATCAACGAACACAATACATG 8127246 Query 16096 GTTGATTTTCGCGAGCGACTTC--AAAGAGATCCCGTACACGCTTGGCGCCCACACCAAC 16153 | ||| || || |||| || | ||| ||||| || || || |||||||| Sbjct 8127247 GGGCATTCTCTTTGGC--CTTCTTGAACAAATCACGTACCCGAGAAGCACCAACACCAAC 8127304 Query 16154 AAACATCTCCACAAAGTTTGCGGCGGAACATTG-GATGAAGGGGACATTAGATTCACCCG 16212 ||||||||| ||||| | | | | | |||| || || || ||| || |||||| | Sbjct 8127305 AAACATCTCAACAAACTCAGAACCTG-AGATTGAGAAAAATGGAACACCAGCTTCACCAG 8127363 Query 16213 CAATGGCTCGGGCGAGAAGAGTCTTACCCGTACCTGGCTTACCCGCGAGGAGGGCACCTC 16272 |||| || ||| | || ||||| || || ||||| ||| | || || | ||| Sbjct 8127364 CAATAGCCTTGGCTAACAGTGTCTTCCCTGTTCCTGGAGGACCAACAAGAAGAACTCCTT 8127423 Query 16273 GTGGAATCTTGGCGCCACTTCCAAAGTATCTCTCAGGTTGCTTAAGAAAATCCACAATCT 16332 ||| || || ||| || | | || ||||| | ||| ||||| || || | || Sbjct 8127424 TTGGTATACGAGCTCCAACAGCAGTGAACCTTTCAGGCTTCTTCAGAAACTCTACCACCT 8127483 Query 16333 CTTCCAATTCATCTTTGGCGGCGTCAATCCCCTCAACATC 16372 | || || | ||||| | || | ||| ||||||| Sbjct 8127484 CCATGAAATCCTGCTTGGCTTCATCCACCCCAGCAACATC 8127523 >seq11 Length=35963958 Score = 111 bits (122), Expect = 2e-19 Identities = 114/149 (77%), Gaps = 0/149 (0%) Strand=Plus/Plus Query 102171 TCCTTTGCTGAGCGACTCTTCGCATTTGCGTGTGTTGAGGGTATCTTCTTCTCTGGTTCC 102230 ||||| |||||||| || | || ||||| |||||||| || || ||||||||||| | Sbjct 2850570 TCCTTCGCTGAGCGCCTTGTTGCGTTTGCTTGTGTTGAAGGAATTTTCTTCTCTGGAAGC 2850629 Query 102231 TTCTGCGCTATTTATTGGCTCAAGAAGCGAGGTCTCATGCCAGGTCTCTGCTTCTCCAAC 102290 ||||| ||||| | ||||| |||||| ||||||| ||||| || || |||||| ||| Sbjct 2850630 TTCTGTGCTATATTCTGGCTTAAGAAGAGAGGTCTTATGCCTGGACTTACCTTCTCAAAC 2850689 Query 102291 GAGCTTATCTCTCGTGACGAGGGACTCCA 102319 ||| | || || || || || || || || Sbjct 2850690 GAGTTGATATCGCGAGATGAAGGGCTTCA 2850718 >seq7 Length=19782170 Score = 102 bits (112), Expect = 1e-16 Identities = 241/362 (67%), Gaps = 4/362 (1%) Strand=Plus/Minus Query 15974 AAAACCATCCATCTCTGTCAAAAGCTGGTTAATAGTTTGTTCCCGTTCATCATTCGCTGG 16033 ||| || |||||||| ||||| ||||| |||||||| ||||||| ||||||||| || Sbjct 7716243 AAACCCGTCCATCTCAGTCAACAGCTGATTAATAGTCTGTTCCCTCTCATCATTCCCTCC 7716184 Query 16034 CATACCACCAGCACTGCGTTGCTTTCCCACGGCATCAATCTCATCAATGAAGACGATGCA 16093 | |||||| | | ||| | || || |||||||||||||| || || || ||||| Sbjct 7716183 CCCCATACCAGCCCCTCTCTGCCTCCCAACCGCATCAATCTCATCGATAAACACAATGCA 7716124 Query 16094 TGGTTGATTTTCGCGAGCGACT--TCAAAGAGATCCCGTACACGCTTGGCGCCCACACCA 16151 || ||||| | || || || | ||||| || | | || ||||| || Sbjct 7716123 AGG--CGCTTTCGACTTTGCCTTCTCGAACAAATCCCTCACCCTCGAAGCACCCACCCCG 7716066 Query 16152 ACAAACATCTCCACAAAGTTTGCGGCGGAACATTGGATGAAGGGGACATTAGATTCACCC 16211 ||||||| ||||||||| | || || | ||| | ||| || || || || || Sbjct 7716065 ACAAACAGCTCCACAAATTCTGAAGCTGCACAGGAAAAGAACGGCACGCCAGCCTCCCCA 7716006 Query 16212 GCAATGGCTCGGGCGAGAAGAGTCTTACCCGTACCTGGCTTACCCGCGAGGAGGGCACCT 16271 || | |||| || | ||| ||||| || || || || ||| | || ||| ||| Sbjct 7716005 GCTACCGCTCTCGCCAAAAGTGTCTTCCCTGTGCCCGGTGGTCCCACCAGAAGGCACCCT 7715946 Query 16272 CGTGGAATCTTGGCGCCACTTCCAAAGTATCTCTCAGGTTGCTTAAGAAAATCCACAATC 16331 |||||||| || || || || | ||||| | ||| |||||||| || | | Sbjct 7715945 TTCGGAATCTTAGCACCCAAGGCAGTATACTTATCAGGATTCTTCAGAAAATCAACCACC 7715886 Query 16332 TC 16333 || Sbjct 7715885 TC 7715884 >seq17 Length=21299880 Score = 86.0 bits (94), Expect = 8e-12 Identities = 115/159 (72%), Gaps = 2/159 (1%) Strand=Plus/Minus Query 184557 TTGGAATA--GGTGCAAATGATGTTGCCAATGCATTCGCAACATCAGTTGGATCAGGTGC 184614 |||||| | ||||| ||||||||||| ||||| | | ||| || ||||| || ||||| Sbjct 20252063 TTGGAACATTGGTGCTAATGATGTTGCAAATGCTATGGGAACTTCTGTTGGGTCTGGTGC 20252004 Query 184615 TTTGAAAGTTAAGCACGCAGTGCCACTCGCGGCTGTGTGTGAGTTTTCGGGGTCTCTGTT 184674 |||| | ||||||| || ||| | || || |||| || ||||| || | |||| Sbjct 20252003 CTTGACACTTAAGCAAGCTGTGTTGATAGCTGCAGTGTTGGAATTTTCAGGAGCAATGTT 20251944 Query 184675 TATGGGAAGTCATGTCGTAAAAACAATACGAAAAGGAAT 184713 ||||||| |||||| || ||||| | || ||||| Sbjct 20251943 GATGGGAACTCATGTGACAAGCACAATGCAGAAGGGAAT 20251905 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 620637083292560