Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Lupinus_20angustifolius_20[refseq_20GCF_5F001865875.1_202016-11-16]
13,573 sequences; 609,203,021 total letters
Query= NC_014766.1
Length=194022
Score E
Sequences producing significant alignments: (Bits) Value
seq2 118 1e-21
seq16 116 5e-21
seq15 113 6e-20
seq12 113 6e-20
seq11 111 2e-19
seq7 102 1e-16
seq17 86.0 8e-12
>seq2
Length=24697652
Score = 118 bits (130), Expect = 1e-21
Identities = 112/143 (78%), Gaps = 0/143 (0%)
Strand=Plus/Minus
Query 102171 TCCTTTGCTGAGCGACTCTTCGCATTTGCGTGTGTTGAGGGTATCTTCTTCTCTGGTTCC 102230
||||| ||||| || ||| | || ||||| |||||||| ||||| ||||||||||| |
Sbjct 21047076 TCCTTCGCTGAACGTCTCGTTGCGTTTGCTTGTGTTGAAGGTATTTTCTTCTCTGGAAGC 21047017
Query 102231 TTCTGCGCTATTTATTGGCTCAAGAAGCGAGGTCTCATGCCAGGTCTCTGCTTCTCCAAC 102290
||||| || || | |||| | ||||| ||||| || ||||| ||||| |||||| |||
Sbjct 21047016 TTCTGTGCGATATTTTGGTTGAAGAAACGAGGCCTTATGCCTGGTCTTACCTTCTCAAAC 21046957
Query 102291 GAGCTTATCTCTCGTGACGAGGG 102313
||| | ||||| || || |||||
Sbjct 21046956 GAGTTAATCTCGCGAGATGAGGG 21046934
>seq16
Length=20786881
Score = 116 bits (128), Expect = 5e-21
Identities = 232/337 (69%), Gaps = 10/337 (3%)
Strand=Plus/Plus
Query 15918 TCAAGGATATCAACGCGATTCGTTGCGGCGATGACAACAATACCTGTTTCGTTATCAAAA 15977
||||| || ||| | | || ||||| || || |||| | ||| || | |||||
Sbjct 9801844 TCAAGAATGTCAGCTCTGTTAGTTGCTGCAATCACAATGACACCGGTATTACCCTCAAAC 9801903
Query 15978 CCATCCATCTCTGTCAAAAGCTGGTTAATAGTTTGTTCCCGTTCATCATTCGCTGGCATA 16037
|||||||| ||||||||||| ||||||| |||||||| | |||||| ||| || |
Sbjct 9801904 CCATCCATTTCTGTCAAAAGTTGGTTAAGGGTTTGTTCTCTTTCATCGTTCCCT--CCAC 9801961
Query 16038 CCA--CCAGCACTGCGTTGCTTTCCCACGGCATCAATCTCATCAATGAAGACGATGCATG 16095
||| |||| || | |||| |||| || || ||||| ||||||| || || ||||| |
Sbjct 9801962 CCATTCCAGTACCTCTTTGCCTTCCAACAGCGTCAATTTCATCAACAAAAACAATGCAAG 9802021
Query 16096 GTTGATTTTCGCGAGCGACTTC--AAAGAGATCCCGTACACGCTTGGCGCCCACACCAAC 16153
| ||| || || |||| || | ||| || || || || || ||||||||
Sbjct 9802022 GAGAATTCTCTTTGGC--CTTCTTGAATAAATCACGGACTCGAGAAGCACCAACACCAAC 9802079
Query 16154 AAACATCTCCACAAAGTTTGCGGCGGAACATTG-GATGAAGGGGACATTAGATTCACCCG 16212
||||||||| ||||| | | | | | |||| || || |||||| | |||||| |
Sbjct 9802080 AAACATCTCAACAAACTCAGAACCCG-AGATTGAGAAAAAAGGGACACCTGCTTCACCAG 9802138
Query 16213 CAATGGCTCGGGCGAGAAGAGTCTTACCCGTACCTGG 16249
|||| || || | || ||||| || || |||||
Sbjct 9802139 CAATAGCCTTCGCTAATAGCGTCTTCCCAGTTCCTGG 9802175
>seq15
Length=20964703
Score = 113 bits (124), Expect = 6e-20
Identities = 150/201 (75%), Gaps = 12/201 (6%)
Strand=Plus/Minus
Query 15974 AAAACCATCCATCTCTGTCAAAAGCTGGTTAATAGTTTGTTCCCGTTCATCATTCGCTGG 16033
||| ||||||||||| ||||| | |||||||||||||||||||| ||||||||| |
Sbjct 20643967 AAACCCATCCATCTCGGTCAATAACTGGTTAATAGTTTGTTCCCTCTCATCATTCCC--A 20643910
Query 16034 CATACC--ACCAGCACTGCGTTGCTTTCCCACGGCATCAATCTCATCAATGAAGACGATG 16091
| | || ||| |||| | ||| ||||||| |||||||| ||||| || || || |||
Sbjct 20643909 CCTCCCATACCTGCACCCCTTTGTCTTCCCACAGCATCAATTTCATCTATAAAAACAATG 20643850
Query 16092 CATGGTTGATTTTCGCGAGCGAC--TTCAAAGAGATCCCGTACACGCTTG--GCGCCCAC 16147
|| || ||||| || | |||||| | ||| | || || |||| || || ||
Sbjct 20643849 CAAGG--CGCTTTCGACTTCGCCTTTTCAAACAAATCTC-TA-ACCCTTGAAGCACCAAC 20643794
Query 16148 ACCAACAAACATCTCCACAAA 16168
||||||||||| ||||||||
Sbjct 20643793 ACCAACAAACAATTCCACAAA 20643773
>seq12
Length=19065701
Score = 113 bits (124), Expect = 6e-20
Identities = 305/460 (66%), Gaps = 10/460 (2%)
Strand=Plus/Plus
Query 15918 TCAAGGATATCAACGCGATTCGTTGCGGCGATGACAACAATACCTGTTTCGTTATCAAAA 15977
||||| || || | | || ||||| || | |||| ||||| || | |||||
Sbjct 8127069 TCAAGAATGTCGGCTCTGTTAGTTGCTGCAACAACAATGATACCAGTATTACCCTCAAAC 8127128
Query 15978 CCATCCATCTCTGTCAAAAGCTGGTTAATAGTTTGTTCCCGTTCATCATTCGCTGGCATA 16037
|||||||| ||||||||||| ||||| | || ||||| | |||||||||| || | |
Sbjct 8127129 CCATCCATTTCTGTCAAAAGTTGGTTGAGGGTCTGTTCTCTTTCATCATTCCCT--CCTC 8127186
Query 16038 CCA--CCAGCACTGCGTTGCTTTCCCACGGCATCAATCTCATCAATGAAGACGATGCATG 16095
| | || | | | ||| |||| || |||||||| ||||||| ||| || || ||||
Sbjct 8127187 CAATTCCGGTCCCTCTTTGTCTTCCAACAGCATCAATTTCATCAACGAACACAATACATG 8127246
Query 16096 GTTGATTTTCGCGAGCGACTTC--AAAGAGATCCCGTACACGCTTGGCGCCCACACCAAC 16153
| ||| || || |||| || | ||| ||||| || || || ||||||||
Sbjct 8127247 GGGCATTCTCTTTGGC--CTTCTTGAACAAATCACGTACCCGAGAAGCACCAACACCAAC 8127304
Query 16154 AAACATCTCCACAAAGTTTGCGGCGGAACATTG-GATGAAGGGGACATTAGATTCACCCG 16212
||||||||| ||||| | | | | | |||| || || || ||| || |||||| |
Sbjct 8127305 AAACATCTCAACAAACTCAGAACCTG-AGATTGAGAAAAATGGAACACCAGCTTCACCAG 8127363
Query 16213 CAATGGCTCGGGCGAGAAGAGTCTTACCCGTACCTGGCTTACCCGCGAGGAGGGCACCTC 16272
|||| || ||| | || ||||| || || ||||| ||| | || || | |||
Sbjct 8127364 CAATAGCCTTGGCTAACAGTGTCTTCCCTGTTCCTGGAGGACCAACAAGAAGAACTCCTT 8127423
Query 16273 GTGGAATCTTGGCGCCACTTCCAAAGTATCTCTCAGGTTGCTTAAGAAAATCCACAATCT 16332
||| || || ||| || | | || ||||| | ||| ||||| || || | ||
Sbjct 8127424 TTGGTATACGAGCTCCAACAGCAGTGAACCTTTCAGGCTTCTTCAGAAACTCTACCACCT 8127483
Query 16333 CTTCCAATTCATCTTTGGCGGCGTCAATCCCCTCAACATC 16372
| || || | ||||| | || | ||| |||||||
Sbjct 8127484 CCATGAAATCCTGCTTGGCTTCATCCACCCCAGCAACATC 8127523
>seq11
Length=35963958
Score = 111 bits (122), Expect = 2e-19
Identities = 114/149 (77%), Gaps = 0/149 (0%)
Strand=Plus/Plus
Query 102171 TCCTTTGCTGAGCGACTCTTCGCATTTGCGTGTGTTGAGGGTATCTTCTTCTCTGGTTCC 102230
||||| |||||||| || | || ||||| |||||||| || || ||||||||||| |
Sbjct 2850570 TCCTTCGCTGAGCGCCTTGTTGCGTTTGCTTGTGTTGAAGGAATTTTCTTCTCTGGAAGC 2850629
Query 102231 TTCTGCGCTATTTATTGGCTCAAGAAGCGAGGTCTCATGCCAGGTCTCTGCTTCTCCAAC 102290
||||| ||||| | ||||| |||||| ||||||| ||||| || || |||||| |||
Sbjct 2850630 TTCTGTGCTATATTCTGGCTTAAGAAGAGAGGTCTTATGCCTGGACTTACCTTCTCAAAC 2850689
Query 102291 GAGCTTATCTCTCGTGACGAGGGACTCCA 102319
||| | || || || || || || || ||
Sbjct 2850690 GAGTTGATATCGCGAGATGAAGGGCTTCA 2850718
>seq7
Length=19782170
Score = 102 bits (112), Expect = 1e-16
Identities = 241/362 (67%), Gaps = 4/362 (1%)
Strand=Plus/Minus
Query 15974 AAAACCATCCATCTCTGTCAAAAGCTGGTTAATAGTTTGTTCCCGTTCATCATTCGCTGG 16033
||| || |||||||| ||||| ||||| |||||||| ||||||| ||||||||| ||
Sbjct 7716243 AAACCCGTCCATCTCAGTCAACAGCTGATTAATAGTCTGTTCCCTCTCATCATTCCCTCC 7716184
Query 16034 CATACCACCAGCACTGCGTTGCTTTCCCACGGCATCAATCTCATCAATGAAGACGATGCA 16093
| |||||| | | ||| | || || |||||||||||||| || || || |||||
Sbjct 7716183 CCCCATACCAGCCCCTCTCTGCCTCCCAACCGCATCAATCTCATCGATAAACACAATGCA 7716124
Query 16094 TGGTTGATTTTCGCGAGCGACT--TCAAAGAGATCCCGTACACGCTTGGCGCCCACACCA 16151
|| ||||| | || || || | ||||| || | | || ||||| ||
Sbjct 7716123 AGG--CGCTTTCGACTTTGCCTTCTCGAACAAATCCCTCACCCTCGAAGCACCCACCCCG 7716066
Query 16152 ACAAACATCTCCACAAAGTTTGCGGCGGAACATTGGATGAAGGGGACATTAGATTCACCC 16211
||||||| ||||||||| | || || | ||| | ||| || || || || ||
Sbjct 7716065 ACAAACAGCTCCACAAATTCTGAAGCTGCACAGGAAAAGAACGGCACGCCAGCCTCCCCA 7716006
Query 16212 GCAATGGCTCGGGCGAGAAGAGTCTTACCCGTACCTGGCTTACCCGCGAGGAGGGCACCT 16271
|| | |||| || | ||| ||||| || || || || ||| | || ||| |||
Sbjct 7716005 GCTACCGCTCTCGCCAAAAGTGTCTTCCCTGTGCCCGGTGGTCCCACCAGAAGGCACCCT 7715946
Query 16272 CGTGGAATCTTGGCGCCACTTCCAAAGTATCTCTCAGGTTGCTTAAGAAAATCCACAATC 16331
|||||||| || || || || | ||||| | ||| |||||||| || | |
Sbjct 7715945 TTCGGAATCTTAGCACCCAAGGCAGTATACTTATCAGGATTCTTCAGAAAATCAACCACC 7715886
Query 16332 TC 16333
||
Sbjct 7715885 TC 7715884
>seq17
Length=21299880
Score = 86.0 bits (94), Expect = 8e-12
Identities = 115/159 (72%), Gaps = 2/159 (1%)
Strand=Plus/Minus
Query 184557 TTGGAATA--GGTGCAAATGATGTTGCCAATGCATTCGCAACATCAGTTGGATCAGGTGC 184614
|||||| | ||||| ||||||||||| ||||| | | ||| || ||||| || |||||
Sbjct 20252063 TTGGAACATTGGTGCTAATGATGTTGCAAATGCTATGGGAACTTCTGTTGGGTCTGGTGC 20252004
Query 184615 TTTGAAAGTTAAGCACGCAGTGCCACTCGCGGCTGTGTGTGAGTTTTCGGGGTCTCTGTT 184674
|||| | ||||||| || ||| | || || |||| || ||||| || | ||||
Sbjct 20252003 CTTGACACTTAAGCAAGCTGTGTTGATAGCTGCAGTGTTGGAATTTTCAGGAGCAATGTT 20251944
Query 184675 TATGGGAAGTCATGTCGTAAAAACAATACGAAAAGGAAT 184713
||||||| |||||| || ||||| | || |||||
Sbjct 20251943 GATGGGAACTCATGTGACAAGCACAATGCAGAAGGGAAT 20251905
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 620637083292560
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |