Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Lupinus_20angustifolius_20[refseq_20GCF_5F001865875.1_202016-11-16]
13,573 sequences; 609,203,021 total letters
Query= NC_014767.1
Length=184095
Score E
Sequences producing significant alignments: (Bits) Value
seq11 116 4e-21
seq5 82.4 9e-11
>seq11
Length=35963958
Score = 116 bits (128), Expect = 4e-21
Identities = 114/147 (78%), Gaps = 0/147 (0%)
Strand=Plus/Minus
Query 119507 ATGAAGCCCTTCATCCCGAGAGATGAGCTCATTACTGAAGCAAAGTCCAGGCATGAGTCC 119566
||||||||||||||| || || || | ||| || |||| |||||||||||| || ||
Sbjct 2850719 ATGAAGCCCTTCATCTCGCGATATCAACTCGTTTGAGAAGGTAAGTCCAGGCATAAGACC 2850660
Query 119567 TCTTTTCTTTAGCCAAAAGATGGCACAAAAACTTCCAGAAAAGAAGATGCCCTCCACACA 119626
||| ||||| ||||| || || ||||| || |||||||| ||||| || || || |||||
Sbjct 2850659 TCTCTTCTTAAGCCAGAATATAGCACAGAAGCTTCCAGAGAAGAAAATTCCTTCAACACA 2850600
Query 119627 GGCGAAAGCGAATAGACGCTCAGCAAA 119653
|| || || | || |||||||| ||
Sbjct 2850599 AGCAAACGCAACAAGGCGCTCAGCGAA 2850573
>seq5
Length=26376911
Score = 82.4 bits (90), Expect = 9e-11
Identities = 76/95 (80%), Gaps = 1/95 (1%)
Strand=Plus/Plus
Query 136717 TAGCTCAGTTGGTTAGAGCGTGGTGCTTATAACGCCAAGGTCACGGGTTCGAGCCCCGTT 136776
||||||||||||||||||||| ||||| ||||||| |||||||| ||||||| || ||
Sbjct 25804845 TAGCTCAGTTGGTTAGAGCGTCGTGCTAATAACGCGAAGGTCACAGGTTCGAAACCTGTA 25804904
Query 136777 GGGAACAGCTTTTAGATATATTTTTTGTATGTATA 136811
|| || |||| | | ||||||| || | ||||
Sbjct 25804905 TGGGCCA-TTTTTTGTTTTATTTTTAGTTTATATA 25804938
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 588876072859400
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |