Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lupinus_20angustifolius_20[refseq_20GCF_5F001865875.1_202016-11-16] 13,573 sequences; 609,203,021 total letters Query= NC_014767.1 Length=184095 Score E Sequences producing significant alignments: (Bits) Value seq11 116 4e-21 seq5 82.4 9e-11 >seq11 Length=35963958 Score = 116 bits (128), Expect = 4e-21 Identities = 114/147 (78%), Gaps = 0/147 (0%) Strand=Plus/Minus Query 119507 ATGAAGCCCTTCATCCCGAGAGATGAGCTCATTACTGAAGCAAAGTCCAGGCATGAGTCC 119566 ||||||||||||||| || || || | ||| || |||| |||||||||||| || || Sbjct 2850719 ATGAAGCCCTTCATCTCGCGATATCAACTCGTTTGAGAAGGTAAGTCCAGGCATAAGACC 2850660 Query 119567 TCTTTTCTTTAGCCAAAAGATGGCACAAAAACTTCCAGAAAAGAAGATGCCCTCCACACA 119626 ||| ||||| ||||| || || ||||| || |||||||| ||||| || || || ||||| Sbjct 2850659 TCTCTTCTTAAGCCAGAATATAGCACAGAAGCTTCCAGAGAAGAAAATTCCTTCAACACA 2850600 Query 119627 GGCGAAAGCGAATAGACGCTCAGCAAA 119653 || || || | || |||||||| || Sbjct 2850599 AGCAAACGCAACAAGGCGCTCAGCGAA 2850573 >seq5 Length=26376911 Score = 82.4 bits (90), Expect = 9e-11 Identities = 76/95 (80%), Gaps = 1/95 (1%) Strand=Plus/Plus Query 136717 TAGCTCAGTTGGTTAGAGCGTGGTGCTTATAACGCCAAGGTCACGGGTTCGAGCCCCGTT 136776 ||||||||||||||||||||| ||||| ||||||| |||||||| ||||||| || || Sbjct 25804845 TAGCTCAGTTGGTTAGAGCGTCGTGCTAATAACGCGAAGGTCACAGGTTCGAAACCTGTA 25804904 Query 136777 GGGAACAGCTTTTAGATATATTTTTTGTATGTATA 136811 || || |||| | | ||||||| || | |||| Sbjct 25804905 TGGGCCA-TTTTTTGTTTTATTTTTAGTTTATATA 25804938 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 588876072859400