Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lupinus_20angustifolius_20[refseq_20GCF_5F001865875.1_202016-11-16] 13,573 sequences; 609,203,021 total letters Query= NC_014789.1 Length=184409 Score E Sequences producing significant alignments: (Bits) Value seq12 127 2e-24 seq16 123 3e-23 seq15 123 3e-23 seq2 113 5e-20 seq12587 105 8e-18 seq7 104 3e-17 seq1 93.3 5e-14 seq11 91.5 2e-13 seq2896 86.0 7e-12 >seq12 Length=19065701 Score = 127 bits (140), Expect = 2e-24 Identities = 232/335 (69%), Gaps = 6/335 (2%) Strand=Plus/Plus Query 9225 TCAAGGATATCAACGCGATTCGTCGCGGCGATGACAACAATACCTGTTTCATTATCAAAA 9284 ||||| || || | | || || || || | |||| ||||| || | | ||||| Sbjct 8127069 TCAAGAATGTCGGCTCTGTTAGTTGCTGCAACAACAATGATACCAGTATTACCCTCAAAC 8127128 Query 9285 CCATCCATCTCTGTCAAAAGTTGGTTAATAGTTTGTTCCCGTTCATCATTCGCTGGCATA 9344 |||||||| ||||||||||||||||| | || ||||| | |||||||||| || | | Sbjct 8127129 CCATCCATTTCTGTCAAAAGTTGGTTGAGGGTCTGTTCTCTTTCATCATTCCCT--CCTC 8127186 Query 9345 CCA--CCAGCACTGCGTTGCTTTCCCACGGCATCAATCTCATCAATGAAGACAATACATG 9402 | | || | | | ||| |||| || |||||||| ||||||| ||| |||||||||| Sbjct 8127187 CAATTCCGGTCCCTCTTTGTCTTCCAACAGCATCAATTTCATCAACGAACACAATACATG 8127246 Query 9403 GTTGATTTTCGCGGGCGATTTCAAAGAGATCGCGAACCCTTTTGGCGCCCACACCAACAA 9462 | ||| || ||| | | || | ||| || |||| || || |||||||||| Sbjct 8127247 GGGCATTCTCTTTGGCCTTCTTGAACAAATCACGTACCCGAGAAGCACCAACACCAACAA 8127306 Query 9463 ACATCTCCACAAAGTTTGCGGCGGAACATTG-GATGAAGGGGACATTAGATTCACCCGCA 9521 ||||||| ||||| | | | | | |||| || || || ||| || |||||| ||| Sbjct 8127307 ACATCTCAACAAACTCAGAACCTG-AGATTGAGAAAAATGGAACACCAGCTTCACCAGCA 8127365 Query 9522 ATGGCTCGGGCGAGAAGAGTCTTACCCGTACCTGG 9556 || || ||| | || ||||| || || ||||| Sbjct 8127366 ATAGCCTTGGCTAACAGTGTCTTCCCTGTTCCTGG 8127400 >seq16 Length=20786881 Score = 123 bits (136), Expect = 3e-23 Identities = 231/335 (69%), Gaps = 6/335 (2%) Strand=Plus/Plus Query 9225 TCAAGGATATCAACGCGATTCGTCGCGGCGATGACAACAATACCTGTTTCATTATCAAAA 9284 ||||| || ||| | | || || || || || |||| | ||| || | | ||||| Sbjct 9801844 TCAAGAATGTCAGCTCTGTTAGTTGCTGCAATCACAATGACACCGGTATTACCCTCAAAC 9801903 Query 9285 CCATCCATCTCTGTCAAAAGTTGGTTAATAGTTTGTTCCCGTTCATCATTCGCTGGCATA 9344 |||||||| ||||||||||||||||||| |||||||| | |||||| ||| || | Sbjct 9801904 CCATCCATTTCTGTCAAAAGTTGGTTAAGGGTTTGTTCTCTTTCATCGTTCCCT--CCAC 9801961 Query 9345 CCA--CCAGCACTGCGTTGCTTTCCCACGGCATCAATCTCATCAATGAAGACAATACATG 9402 ||| |||| || | |||| |||| || || ||||| ||||||| || ||||| || | Sbjct 9801962 CCATTCCAGTACCTCTTTGCCTTCCAACAGCGTCAATTTCATCAACAAAAACAATGCAAG 9802021 Query 9403 GTTGATTTTCGCGGGCGATTTCAAAGAGATCGCGAACCCTTTTGGCGCCCACACCAACAA 9462 | ||| || ||| | | || | ||| || || | || || |||||||||| Sbjct 9802022 GAGAATTCTCTTTGGCCTTCTTGAATAAATCACGGACTCGAGAAGCACCAACACCAACAA 9802081 Query 9463 ACATCTCCACAAAGTTTGCGGCGGAACATTG-GATGAAGGGGACATTAGATTCACCCGCA 9521 ||||||| ||||| | | | | | |||| || || |||||| | |||||| ||| Sbjct 9802082 ACATCTCAACAAACTCAGAACCCG-AGATTGAGAAAAAAGGGACACCTGCTTCACCAGCA 9802140 Query 9522 ATGGCTCGGGCGAGAAGAGTCTTACCCGTACCTGG 9556 || || || | || ||||| || || ||||| Sbjct 9802141 ATAGCCTTCGCTAATAGCGTCTTCCCAGTTCCTGG 9802175 >seq15 Length=20964703 Score = 123 bits (136), Expect = 3e-23 Identities = 201/285 (71%), Gaps = 6/285 (2%) Strand=Plus/Minus Query 9194 ATCAAAGCGACCTGGACGAAGGAGCGCGTCATCAAGGATATCAACGCGATTCGTCGCGGC 9253 |||||| ||||| || | | | ||| |||||| | |||| | || ||||| || Sbjct 20644054 ATCAAATCGACCCGGCCTTAACAAGGCGGAATCAAGAACATCAGGTCTGTTGGTCGCAGC 20643995 Query 9254 GATGACAACAATACCTGTTTCATTATCAAAACCATCCATCTCTGTCAAAAGTTGGTTAAT 9313 | || | || ||| | | | | ||| ||||||||||| ||||| | |||||||| Sbjct 20643994 CAAAACTATAACACCAGAATTACCAGAAAACCCATCCATCTCGGTCAATAACTGGTTAAT 20643935 Query 9314 AGTTTGTTCCCGTTCATCATTCGCTGGCATACC--ACCAGCACTGCGTTGCTTTCCCACG 9371 ||||||||||| ||||||||| | | | || ||| |||| | ||| ||||||| Sbjct 20643934 AGTTTGTTCCCTCTCATCATTCCC--ACCTCCCATACCTGCACCCCTTTGTCTTCCCACA 20643877 Query 9372 GCATCAATCTCATCAATGAAGACAATACATGGTTGATTTTCGC-GGGCGATTTCAAAGAG 9430 |||||||| ||||| || || ||||| || || | ||| | || ||||||| | Sbjct 20643876 GCATCAATTTCATCTATAAAAACAATGCAAGG-CGCTTTCGACTTCGCCTTTTCAAACAA 20643818 Query 9431 ATCGCGAACCCTTTTGGCGCCCACACCAACAAACATCTCCACAAA 9475 ||| | ||||||| || || ||||||||||||| |||||||| Sbjct 20643817 ATCTCTAACCCTTGAAGCACCAACACCAACAAACAATTCCACAAA 20643773 >seq2 Length=24697652 Score = 113 bits (124), Expect = 5e-20 Identities = 115/150 (77%), Gaps = 0/150 (0%) Strand=Plus/Plus Query 117285 GTGGAGACCCTCATCTCGGGAAATAAGTTCATTTGAGAAGCATAGGCCTGGCATGAGACC 117344 ||| | |||||||||||| || || | || ||||||||| || || ||||| || || Sbjct 21046927 GTGTAAACCCTCATCTCGCGAGATTAACTCGTTTGAGAAGGTAAGACCAGGCATAAGGCC 21046986 Query 117345 CCGCTTCTTCAACCAATAAATAGCGCAGAATGACCCGGAGAAGAAGATACCCTCCACACA 117404 || |||||||||||| | || || ||||| || |||||||| ||||| || ||||| Sbjct 21046987 TCGTTTCTTCAACCAAAATATCGCACAGAAGCTTCCAGAGAAGAAAATACCTTCAACACA 21047046 Query 117405 CGCAAACGCAAAAAGGCGCTCGGCGAAGGA 117434 |||||||||| || || || |||||||| Sbjct 21047047 AGCAAACGCAACGAGACGTTCAGCGAAGGA 21047076 >seq12587 Length=87510 Score = 105 bits (116), Expect = 8e-18 Identities = 249/364 (68%), Gaps = 19/364 (5%) Strand=Plus/Minus Query 25405 CACTTTGCCGCACAAAGTCATGTAGACAATTCATTTAC-AAGTCCTCTTGGGTTTACTTT 25463 |||||||| ||||||| |||||||| ||||| ||| || ||| | | || || | Sbjct 86929 CACTTTGCTGCACAAACCCATGTAGATAATTCCTTTGGTAACTCCA-TGGAATTCACCTA 86871 Query 25464 AGACAATACATATGGTACACATACACTCGTTGAAGTCTGTAGGCGTCACATACCAAATGT 25523 |||||| ||||||||||||| || |||||| |||||| ||||| |||| ||| Sbjct 86870 CAACAATATATATGGTACACATGTTCTTCTTGAAGGTTGTAGG-GTCACTGACCA--TGT 86814 Query 25524 TGAA---TTTATACATTTTAGTACAGATGAAGTATACGGTGAATCAAAAACAGAT--GAA 25578 | || || || ||| |||| || ||||||||||| |||||| | || |||| || Sbjct 86813 TAAAAGATTCATCCATGTTAGCACTGATGAAGTATATGGTGAAACTAAGTTAGATACTAA 86754 Query 25579 CCTT--TCACC--GAAGACACAGGGGTACTTAGACCAACAAATCCATATTCAGCATCAAA 25634 || | ||| || | | | | ||| |||||||| || || |||||| |||| Sbjct 86753 TGTTGGTAACCATGAGGCTTCTCAGCTTCTT---CCAACAAACCCTTACTCAGCAACAAA 86697 Query 25635 AGCGGCGGCCGAAATGATAGTCCGTTCATA-TATAGAATCATTTGATATGAATATCAAAA 25693 ||| | || |||||| | | | |||| |||| || | || | | || | || Sbjct 86696 AGCAGGTGCAGAAATGTTGGCCATGGCATACCATAG-GTCCTATGGTCTTCCAATTATAA 86638 Query 25694 TAATTCGCTGTAATAATGTTTATGGTCCAAATCAATACCCGGAGAAACTCATTCCAAAGT 25753 | | | ||||||||||||||||| || |||||||| || || || |||| |||| Sbjct 86637 CCTCTAGAGGAAATAATGTTTATGGTCCTAACCAATACCCAGAAAAGCTTGTTCCTAAGT 86578 Query 25754 TTAT 25757 | || Sbjct 86577 TAAT 86574 >seq7 Length=19782170 Score = 104 bits (114), Expect = 3e-17 Identities = 244/366 (67%), Gaps = 12/366 (3%) Strand=Plus/Minus Query 9281 AAAACCATCCATCTCTGTCAAAAGTTGGTTAATAGTTTGTTCCCGTTCATCATTCGCTGG 9340 ||| || |||||||| ||||| || || |||||||| ||||||| ||||||||| || Sbjct 7716243 AAACCCGTCCATCTCAGTCAACAGCTGATTAATAGTCTGTTCCCTCTCATCATTCCCTCC 7716184 Query 9341 CATACCACCAGCACTGCGTTGCTTTCCCACGGCATCAATCTCATCAATGAAGACAATACA 9400 | |||||| | | ||| | || || |||||||||||||| || || ||||| || Sbjct 7716183 CCCCATACCAGCCCCTCTCTGCCTCCCAACCGCATCAATCTCATCGATAAACACAATGCA 7716124 Query 9401 TGG-----TTGATTTTCGCGGGCGATTTCAAAGAGATCGCGAACCCTTTTGGCGCCCACA 9455 || | || ||| || | || || | ||| | ||||| || ||||| Sbjct 7716123 AGGCGCTTTCGACTTT-----GCCTTCTCGAACAAATCCCTCACCCTCGAAGCACCCACC 7716069 Query 9456 CCAACAAACATCTCCACAAAGTTTGCGGCGGAACATTGGATGAAGGGGACATTAGATTCA 9515 || ||||||| ||||||||| | || || | ||| | ||| || || || || Sbjct 7716068 CCGACAAACAGCTCCACAAATTCTGAAGCTGCACAGGAAAAGAACGGCACGCCAGCCTCC 7716009 Query 9516 CCCGCAATGGCTCGGGCGAGAAGAGTCTTACCCGTACCTGGCTTACCCGCGAGGAGGGCA 9575 || || | |||| || | ||| ||||| || || || || ||| | | || |||| Sbjct 7716008 CCAGCTACCGCTCTCGCCAAAAGTGTCTTCCCTGTGCCCGGTGGTCCCACCA-GAAGGCA 7715950 Query 9576 CCCCGT-GGAATCTTGGCGCCACTTCCAAAGTATCTCTCAGGTTGCTTGAGAAAATCCAC 9634 ||| | |||||||| || || || || | ||||| | ||| |||||||| || Sbjct 7715949 CCCTTTCGGAATCTTAGCACCCAAGGCAGTATACTTATCAGGATTCTTCAGAAAATCAAC 7715890 Query 9635 AATCTC 9640 | ||| Sbjct 7715889 CACCTC 7715884 >seq1 Length=36457581 Score = 93.3 bits (102), Expect = 5e-14 Identities = 159/228 (70%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 107167 CTGCGGTCTTGGTGTACCAGCATTGAAGAGGGTTGGTGTTGCGTGAATGAACATACCTTG 107226 ||| || || ||||| || |||||||| || || || | ||| ||| ||||| | || Sbjct 33689431 CTGAGGCCTAGGTGTTCCGGCATTGAATAGAGTAGGAGATGCATGAGTGAACCATCTCTG 33689490 Query 107227 GGACATCTTGTCGTATGTCTCCAAGACAGAATCAATGTCTTCCCCGTGGATGCCGATGGC 107286 ||||| || ||| || | | ||||||||||||| ||| ||| || || | | Sbjct 33689491 AGACATTAGGTGGTAAGTTTTGACAGCAGAATCAATGTCATCCTTGTGAATTCCAACAGA 33689550 Query 107287 CACACGCATAAACATGTATTGGGGTGTTTCCATGAGGATGCCATCGAGCCGTTGA-AGAT 107345 || | ||| ||||||| || ||| |||| | | | || || | || | | || | Sbjct 33689551 AACCCTCATCAACATGTGCTGAGGTCTTTCAACAACTTTTCCTTC-AACCTTCAACAGGT 33689609 Query 107346 AGCTCTTCTCAAGGGTTTTGAGACCAAAGTAACCAAAATCATAGTCCC 107393 || | ||||||||||||||| |||||||||| || | ||| |||||| Sbjct 33689610 AGGACCTCTCAAGGGTTTTGAAACCAAAGTAATCATAGTCAAAGTCCC 33689657 >seq11 Length=35963958 Score = 91.5 bits (100), Expect = 2e-13 Identities = 167/242 (69%), Gaps = 6/242 (2%) Strand=Plus/Minus Query 107154 AGCAACTGGACATCTGCGGTCTTGGTGTACCAGCATTGAAGAGGGTTGGTGTTGCGTGAA 107213 |||||| | || ||| || || ||||| || |||||||| || || || | ||| ||| Sbjct 31406465 AGCAACCGTAC--CTGAGGCCTAGGTGTCCCGGCATTGAACAGAGTAGGAGATGCATGAG 31406408 Query 107214 TGAACATACCTTGGGACATCTTGTCGTATGTCTCCAAGACAGAATCAATGTCTTCCCCGT 107273 ||||| | || |||||| | |||||| | | ||||||| |||| ||| || Sbjct 31406407 TGAACCATCTCTGTGACATCAGATGGTATGTTTTGACAGCAGAATCTATGTTATCCTTGT 31406348 Query 107274 GGATGCCGATGGCCACACGCATAAACATGTATTGGGGTGTTTCCATGAGGATGCCATCGA 107333 | || || | | || | ||| ||||||| || ||| |||| | | || || | Sbjct 31406347 GAATTCCAACAGAAACCCTCATCAACATGTGCTGAGGTCTTTCAACAACTTGTCCTTCAA 31406288 Query 107334 GCCGTTGAAGA--TAGCTCTTCTCAAGGGTTTTGAGACCAAAGTAACCAAAATCATAGTC 107391 | || |||| ||| | ||||||||||||||| |||||||||| || | ||| |||| Sbjct 31406287 CC--TTCAAGAGGTAGGACCTCTCAAGGGTTTTGAAACCAAAGTAATCATAGTCAAAGTC 31406230 Query 107392 CC 107393 || Sbjct 31406229 CC 31406228 >seq2896 Length=25968 Score = 86.0 bits (94), Expect = 7e-12 Identities = 104/142 (73%), Gaps = 0/142 (0%) Strand=Plus/Minus Query 106448 ACATACTTTGGAAGGGCGATTGATGCCAAATTGCAAACAGCCGTCTCATCCTTATCTGTG 106507 ||||| ||| || || |||||||||| ||| |||||||| || || | || Sbjct 5652 ACATATCGTGGTAGTGCTATTGATGCCAGATTACAAACAGCAGTTTCTGTTGGACTTGAA 5593 Query 106508 TACTCTAAAATTTCTGTACACAAGTTGGAACTCTTAATCGTCCCCAAATTCTTTTGGTTA 106567 ||||| | || || ||||||||||| ||| |||||| || |||| ||||| || ||| Sbjct 5592 TACTCAATTATCTCAGTACACAAGTTTGAAGACTTAATTGTGCCCAGATTCTGCTGATTA 5533 Query 106568 CTCTTTTTGTTGCACGCATCCT 106589 || ||| | ||||| ||||||| Sbjct 5532 CTTTTTCTATTGCAAGCATCCT 5511 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 589880702382520