Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lupinus_20angustifolius_20[refseq_20GCF_5F001865875.1_202016-11-16] 13,573 sequences; 609,203,021 total letters Query= NC_015283.1 Length=176428 Score E Sequences producing significant alignments: (Bits) Value seq664 551 6e-152 seq19 181 1e-40 seq9 131 2e-25 seq5 107 2e-18 seq3662 105 8e-18 seq17 104 3e-17 seq3 86.0 7e-12 seq11 82.4 9e-11 >seq664 Length=18451 Score = 551 bits (610), Expect = 6e-152 Identities = 726/1001 (73%), Gaps = 4/1001 (0%) Strand=Plus/Minus Query 168491 TTCTGCGAATGGGTAACAAGCACTAACAACAGACTTTATGTTGGTTGGTTCGGTGTCTTA 168550 ||||| | ||| |||| |||||| | ||| | ||||| | || ||||| ||||| || Sbjct 1506 TTCTGTAACTGGATAACCAGCACTGAAAACCGTCTTTACATCGGATGGTTTGGTGTTTTG 1447 Query 168551 ATGATCCCATGTTTATTAACAGCAGCAGCATGT-TTCATTGTTGCATTTATTGCTGCACC 168609 |||||||| ||||| || ||| | | ||| || ||| | || || |||||||| || Sbjct 1446 ATGATCCCTACCTTATTGACCGCAACTTC-TGTATTTATTATCGCTTTCATTGCTGCCCC 1388 Query 168610 ACCTGTCGATATCGACGGAATCAGAGAACCTGTAGCAGGTGCTCTAATGTATGGAAACAA 168669 || || ||||| || || || | || ||||| | || ||||| | || |||||||| Sbjct 1387 TCCAGTAGATATTGATGGTATTCGTGAGCCTGTTTCTGGATCTCTACTTTACGGAAACAA 1328 Query 168670 CATCATCTCAGGTGCAGTTGTTCCATCTTCAAACGCAATCGGTCTACACTTCTACCCAAT 168729 || || || ||||| || |||| |||| || |||||| | ||||| ||||| || Sbjct 1327 TATTATTTCGGGTGCTATTATTCCTACTTCTGCGGCTATCGGTTTGCACTTTTACCCGAT 1268 Query 168730 TTGGGAAGCAGCTACAATCGATGAGTGGTTATATAATGGTGGTCCTTACCAGTTGGTAAT 168789 |||||||| || | | ||||| |||||||| ||||| |||||||| | | | | Sbjct 1267 ATGGGAAGCGGCATCCGTTGATGAATGGTTATACAATGGCGGTCCTTATGAACTAATTGT 1208 Query 168790 CTTCCACTTCCTAATCGGAATCTCTGCCTACATGGGTAGACAGTGGGAA-TTATCATACA 168848 | |||||| || | || | || ||||||||| | |||||||| ||| | | Sbjct 1207 TCTACACTTCTTACTTGGTGTAGCTTGTTACATGGGTCGTGAGTGGGAACTTAGTTTTC- 1149 Query 168849 GACTAGGTATGAGACCTTGGATCTGTGTTGCTTATTCAGCACCAGTATCTGCAGCATTTG 168908 | || |||||| | |||||||| ||||| |||||||| || || | || || || Sbjct 1148 GTCTGGGTATGCGCCCTTGGATTGCGGTTGCATATTCAGCTCCTGTTGCAGCTGCTACTG 1089 Query 168909 CAGTATTCCTTGTATACCCATTTGGTCAGGGTTCTTTCTCTGATGGTATGCCTCTAGGAA 168968 | || ||| | | || ||| | ||||| || || || ||||||||||||||||||| Sbjct 1088 CTGTTTTCTTGATTTATCCAATCGGTCAAGGAAGCTTTTCGGATGGTATGCCTCTAGGAA 1029 Query 168969 TTTCTGGAACATTCAACTTCATGTTCGTATTCCAAGCAGAGCACAACATTCTTATGCATC 169028 | ||||| || |||||||| ||| | ||||| || || |||||||| ||||||||||||| Sbjct 1028 TCTCTGGTACTTTCAACTTTATGATTGTATTTCAGGCTGAGCACAATATTCTTATGCATC 969 Query 169029 CCTTCCATATGGCAGGAGTAGCAGGTATGTTCGGTGGATCTCTATTCTCCGCAATGCATG 169088 | || || ||| ||| ||||| ||| | ||||| || || |||||| || ||||| | Sbjct 968 CATTTCACATGTTAGGCGTAGCTGGTGTATTCGGCGGCTCCCTATTCAGTGCTATGCACG 909 Query 169089 GTTCACTTGTAACATCTTCTCTAATCAGAGAGACTACTGAGGAAGAATCTCAGAACTATG 169148 |||| | ||||| ||| | | ||||| || || || || | |||||| ||| | | Sbjct 908 GTTCCTTGGTAACTTCTAGTTTGATCAGGGAAACCACAGAAAATGAATCTGCTAACGAAG 849 Query 169149 GTTACAAGTTCGGTCAAGAAGAAGAAACCTATAATATTGTTGCAGCACATGGATACTTCG 169208 |||||| || |||||||| |||||||||||||||||||| || || ||||| || || | Sbjct 848 GTTACAGATTTGGTCAAGAGGAAGAAACCTATAATATTGTAGCTGCTCATGGTTATTTTG 789 Query 169209 GTAGATTAATCTTCCAGTATGCAAGTTTCAACAACTCAAGAAGTCTTCACTTCTTCCTAG 169268 | |||| |||||||| ||||| |||||||| || || | | | || ||||| |||| Sbjct 788 GCCGATTGATCTTCCAATATGCTAGTTTCAATAATTCTCGTTCTTTACATTTCTTTCTAG 729 Query 169269 CAGTGTTCCCAGTTGTATGTGTATGGTTAACCTCTATGGGTATCTGTACAATGGCATTCA 169328 | | | || || ||| || | ||||| ||| | | |||||| |||| ||||| |||| Sbjct 728 CTGCTTGGCCTGTAGTAGGTATCTGGTTTACCGCGTTAGGTATCAGTACCATGGCTTTCA 669 Query 169329 ACTTGAACGGATTTAACTTTAACCAATCAGTTGTAGATGTTAACGGTAAGATCATTCCTA 169388 | || || || || || || |||||||| || || ||| | | ||| | ||| || Sbjct 668 ATTTAAATGGTTTCAATTTCAACCAATCCGTAGTTGATAGTCAAGGTCGTGTAATTAATA 609 Query 169389 CATGGGGTGACGTACTTAACAGAGCAAACCTTGGTATGGAAGTAATGCATGAGCGTAACG 169448 | |||| ||| | ||||| |||| ||||||||||||||||| |||||||| ||||| | Sbjct 608 CCTGGGCTGATATTATTAACCGAGCTAACCTTGGTATGGAAGTTATGCATGAACGTAATG 549 Query 169449 CTCACAACTTCCCACTAGACTTAGCATCTGCTGAGACTACA 169489 |||| |||||||| |||||| |||| | || ||| || || Sbjct 548 CTCATAACTTCCCTCTAGACCTAGCTGCGGCCGAGGCTCCA 508 >seq19 Length=18159812 Score = 181 bits (200), Expect = 1e-40 Identities = 220/300 (73%), Gaps = 0/300 (0%) Strand=Plus/Plus Query 169190 GCAGCACATGGATACTTCGGTAGATTAATCTTCCAGTATGCAAGTTTCAACAACTCAAGA 169249 || || ||||| || || || |||| |||||||| ||||| |||||||| || || | Sbjct 6185435 GCTGCTCATGGTTATTTTGGCCGATTGATCTTCCAATATGCTAGTTTCAATAATTCTCGT 6185494 Query 169250 AGTCTTCACTTCTTCCTAGCAGTGTTCCCAGTTGTATGTGTATGGTTAACCTCTATGGGT 169309 | | || ||||| ||||| | | || || ||| || | ||||| ||| | | ||| Sbjct 6185495 TCTTTACATTTCTTTCTAGCTGCTTGGCCTGTAGTAGGTATCTGGTTTACCGCGTTAGGT 6185554 Query 169310 ATCTGTACAATGGCATTCAACTTGAACGGATTTAACTTTAACCAATCAGTTGTAGATGTT 169369 ||| |||| ||||| ||||| || || || || || || |||||||| || || ||| | Sbjct 6185555 ATCAGTACCATGGCTTTCAATTTAAATGGTTTCAATTTCAACCAATCCGTAGTTGATAGT 6185614 Query 169370 AACGGTAAGATCATTCCTACATGGGGTGACGTACTTAACAGAGCAAACCTTGGTATGGAA 169429 | ||| | ||| ||| |||| ||| | ||||| |||| ||||||||||||||| Sbjct 6185615 CAAGGTCGTGTAATTAATACCTGGGCTGATATTATTAACCGAGCTAACCTTGGTATGGAA 6185674 Query 169430 GTAATGCATGAGCGTAACGCTCACAACTTCCCACTAGACTTAGCATCTGCTGAGACTACA 169489 || |||||||| ||||| ||||| |||||||| |||||| |||| | || ||| || || Sbjct 6185675 GTTATGCATGAACGTAATGCTCATAACTTCCCTCTAGACCTAGCTGCGGCCGAGGCTCCA 6185734 >seq9 Length=21753712 Score = 131 bits (144), Expect = 2e-25 Identities = 179/249 (72%), Gaps = 1/249 (0%) Strand=Plus/Minus Query 169226 TATGCAAGTTTCAACAACTCAAGAAGTCTTCACTTCTTCCTAGCAGTGTTCCCAGTTGTA 169285 ||||| |||||||| || || | | | || ||||| |||| || | || || ||| Sbjct 18376637 TATGCTAGTTTCAATAATTCTTGTTCTTTACATTTCTTTCTAGTTGTTTGGCCTGTAGTA 18376578 Query 169286 TGTGTATGGTT-AACCTCTATGGGTATCTGTACAATGGCATTCAACTTGAACGGATTTAA 169344 || | ||||| |||| | | |||||| | || ||||| |||||||| || || || || Sbjct 18376577 GGTATCTGGTTTAACCGCATTAGGTATCAGCACCATGGCTTTCAACTTAAATGGTTTCAA 18376518 Query 169345 CTTTAACCAATCAGTTGTAGATGTTAACGGTAAGATCATTCCTACATGGGGTGACGTACT 169404 || ||||||| || || ||| | | ||| | ||| || || | ||| | | Sbjct 18376517 TTTCAACCAATATGTAGTTGATAGTCAAGGTCGTGTAATTAATATCTGAGCTGATATTAT 18376458 Query 169405 TAACAGAGCAAACCTTGGTATGGAAGTAATGCATGAGCGTAACGCTCACAACTTCCCACT 169464 |||| |||| ||||||||||||||||| || ||||| ||||| ||||| ||||||| || Sbjct 18376457 TAACCGAGCTAACCTTGGTATGGAAGTTATACATGAACGTAATGCTCATAACTTCCATCT 18376398 Query 169465 AGACTTAGC 169473 |||| |||| Sbjct 18376397 AGACCTAGC 18376389 >seq5 Length=26376911 Score = 107 bits (118), Expect = 2e-18 Identities = 148/207 (71%), Gaps = 0/207 (0%) Strand=Plus/Minus Query 169283 GTATGTGTATGGTTAACCTCTATGGGTATCTGTACAATGGCATTCAACTTGAACGGATTT 169342 ||| |||| ||||| | | | | ||||| |||| ||| | ||||| || || || || Sbjct 10060436 GTAGGTGTCTGGTTTATCGCATTAGGTATTAGTACTATGACTTTCAATTTAAATGGTTTC 10060377 Query 169343 AACTTTAACCAATCAGTTGTAGATGTTAACGGTAAGATCATTCCTACATGGGGTGACGTA 169402 || || |||||||| | || ||| | | ||| | ||| ||| ||| | | Sbjct 10060376 AATTTCAACCAATCCATAGTTGATAGTCAAGGTCGTGTAATTAATACCTGGACTATTATT 10060317 Query 169403 CTTAACAGAGCAAACCTTGGTATGGAAGTAATGCATGAGCGTAACGCTCACAACTTCCCA 169462 ||||| |||| ||||||||||||||||| |||||||| | ||| ||||| |||||||| Sbjct 10060316 ATTAACCGAGCTAACCTTGGTATGGAAGTTATGCATGAACATAATGCTCATAACTTCCCT 10060257 Query 169463 CTAGACTTAGCATCTGCTGAGACTACA 169489 |||||| |||| | || ||| || || Sbjct 10060256 CTAGACCTAGCTGCGGCCGAGGCTCCA 10060230 >seq3662 Length=122019 Score = 105 bits (116), Expect = 8e-18 Identities = 151/213 (71%), Gaps = 0/213 (0%) Strand=Plus/Plus Query 169277 CCAGTTGTATGTGTATGGTTAACCTCTATGGGTATCTGTACAATGGCATTCAACTTGAAC 169336 || || ||| || | ||||| | | | | |||||| |||| || || ||||| || || Sbjct 4492 CCTGTAGTAGGTATCTGGTTTATCGCGTTAGGTATCAGTACTATAGCTTTCAATTTAAAT 4551 Query 169337 GGATTTAACTTTAACCAATCAGTTGTAGATGTTAACGGTAAGATCATTCCTACATGGGGT 169396 || ||||| || || |||| || || ||| | | ||| | ||| ||| | | | Sbjct 4552 GGTTTTAATTTCAATTAATCCGTAGTTGATTGTCAAGGTCGTGTAATTAATACTTAGACT 4611 Query 169397 GACGTACTTAACAGAGCAAACCTTGGTATGGAAGTAATGCATGAGCGTAACGCTCACAAC 169456 || | ||| | |||| ||||||||||||||||| || ||||| ||||| ||||| ||| Sbjct 4612 GATATTATTAGCTGAGCTAACCTTGGTATGGAAGTTATACATGAACGTAATGCTCATAAC 4671 Query 169457 TTCCCACTAGACTTAGCATCTGCTGAGACTACA 169489 ||||| ||||| |||| | || ||| || || Sbjct 4672 TTCCCTTTAGACCTAGCTGCGGCCGAGGCTCCA 4704 >seq17 Length=21299880 Score = 104 bits (114), Expect = 3e-17 Identities = 131/179 (73%), Gaps = 1/179 (1%) Strand=Plus/Minus Query 169067 TCTCTATTCTCCGCAATGCATGGTTCACTTGTAACATCTTCTCTAATCAGAGAGACTACT 169126 || |||||| || ||||| |||| |||| || ||| | | ||||| || || || Sbjct 21194285 TCCCTATTCAGTGCTATGCACGGTTT-CTTGGTACTTCTAGTTTGATCAGGGAAACCACA 21194227 Query 169127 GAGGAAGAATCTCAGAACTATGGTTACAAGTTCGGTCAAGAAGAAGAAACCTATAATATT 169186 || | |||| | ||| | ||||||| || |||||||| ||||||| |||||||||| Sbjct 21194226 GAAAATGAATTTGCTAACGAAGGTTACAGATTTGGTCAAGAGGAAGAAATCTATAATATT 21194167 Query 169187 GTTGCAGCACATGGATACTTCGGTAGATTAATCTTCCAGTATGCAAGTTTCAACAACTC 169245 || || || |||| || || || |||| |||||||| |||| |||||||| || || Sbjct 21194166 GTAGCTGCTAATGGTTATTTTGGCTGATTGATCTTCCAATATGATAGTTTCAATAATTC 21194108 Score = 87.8 bits (96), Expect = 2e-12 Identities = 77/96 (80%), Gaps = 0/96 (0%) Strand=Plus/Plus Query 168980 TTCAACTTCATGTTCGTATTCCAAGCAGAGCACAACATTCTTATGCATCCCTTCCATATG 169039 |||||||| ||| | ||||| || || |||||||| |||||||||||||| || || ||| Sbjct 19910963 TTCAACTTTATGATTGTATTTCAGGCTGAGCACAATATTCTTATGCATCCATTTCACATG 19911022 Query 169040 GCAGGAGTAGCAGGTATGTTCGGTGGATCTCTATTC 169075 ||| ||||| ||| | ||||| || || |||||| Sbjct 19911023 TTAGGCGTAGCTGGTGTATTCGGCGGCTCCCTATTC 19911058 >seq3 Length=30153019 Score = 86.0 bits (94), Expect = 7e-12 Identities = 68/82 (83%), Gaps = 0/82 (0%) Strand=Plus/Minus Query 169387 TACATGGGGTGACGTACTTAACAGAGCAAACCTTGGTATGGAAGTAATGCATGAGCGTAA 169446 ||| |||| ||| | ||||| |||| ||| ||||||||||||| |||||||| ||||| Sbjct 15965357 TACTTGGGCTGATATTATTAACCGAGCTAACATTGGTATGGAAGTTATGCATGAACGTAA 15965298 Query 169447 CGCTCACAACTTCCCACTAGAC 169468 ||||| |||||||| |||||| Sbjct 15965297 TGCTCATAACTTCCCTCTAGAC 15965276 >seq11 Length=35963958 Score = 82.4 bits (90), Expect = 9e-11 Identities = 77/98 (79%), Gaps = 0/98 (0%) Strand=Plus/Minus Query 169148 GGTTACAAGTTCGGTCAAGAAGAAGAAACCTATAATATTGTTGCAGCACATGGATACTTC 169207 ||||||| || | | |||| |||||||||||||||||||| | | ||||| || || Sbjct 32634539 GGTTACAGATTTGATTAAGAGGAAGAAACCTATAATATTGTAGTTTCTCATGGTTATTTT 32634480 Query 169208 GGTAGATTAATCTTCCAGTATGCAAGTTTCAACAACTC 169245 || |||| |||||||| ||||| |||||||| || || Sbjct 32634479 GGCCGATTGATCTTCCAATATGCTAGTTTCAATAATTC 32634442 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 564345835427040