Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lupinus_20angustifolius_20[refseq_20GCF_5F001865875.1_202016-11-16] 13,573 sequences; 609,203,021 total letters Query= NC_015287.1 Length=232878 Score E Sequences producing significant alignments: (Bits) Value seq664 493 2e-134 seq5 143 4e-29 seq19 138 2e-27 seq3 114 2e-20 seq17 98.7 1e-15 seq8 98.7 1e-15 seq9 89.7 8e-13 seq13 86.0 9e-12 >seq664 Length=18451 Score = 493 bits (546), Expect = 2e-134 Identities = 692/971 (71%), Gaps = 0/971 (0%) Strand=Plus/Minus Query 215315 ACTGACAATCGTATCTACGTTGGTTGGTTTGGTGTCCTCATGATTCCTTGCCTCCTCGCA 215374 ||||| || ||| | ||| | || ||||||||||| | ||||| ||| | | | | Sbjct 1485 ACTGAAAACCGTCTTTACATCGGATGGTTTGGTGTTTTGATGATCCCTACCTTATTGACC 1426 Query 215375 GCTACCACTTGTTTCATCGTAGCATTCATCGCTGCACCTCCTGTCGATATCGACGGAATC 215434 || || || || || | || ||||| ||||| ||||| || ||||| || || || Sbjct 1425 GCAACTTCTGTATTTATTATCGCTTTCATTGCTGCCCCTCCAGTAGATATTGATGGTATT 1366 Query 215435 AGAGAGCCAGTTGCTGGTTCTTTAATGTATGGTAACAACATCATCTCTGGTGCTGTTGTA 215494 | ||||| ||| |||| ||| || | || || ||||| || || || |||||| || | Sbjct 1365 CGTGAGCCTGTTTCTGGATCTCTACTTTACGGAAACAATATTATTTCGGGTGCTATTATT 1306 Query 215495 CCTAGTTCAAACGCAATCGGATTACACTTCTACCCTATCTGGGAAGCAGCAACAGTTGAC 215554 |||| ||| || ||||| || ||||| ||||| || |||||||| ||| | ||||| Sbjct 1305 CCTACTTCTGCGGCTATCGGTTTGCACTTTTACCCGATATGGGAAGCGGCATCCGTTGAT 1246 Query 215555 GAATGGCTCTACAATGGTGGACCTTTCCAACTGGTTATCTTCCACTTCCTCATTGGTATT 215614 |||||| | |||||||| || |||| |||| || | | |||||| | ||||| | Sbjct 1245 GAATGGTTATACAATGGCGGTCCTTATGAACTAATTGTTCTACACTTCTTACTTGGTGTA 1186 Query 215615 TCTGCATACTGCGGAAGACAGTGGGAACTTTCTTACAGATTAGGTATGAGACCTTGGATC 215674 || ||| || | ||||||||||| || | | |||||| | |||||||| Sbjct 1185 GCTTGTTACATGGGTCGTGAGTGGGAACTTAGTTTTCGTCTGGGTATGCGCCCTTGGATT 1126 Query 215675 TGTGTTGCTTACTCCGCACCTGTATCTGCTGCCTTTGCAGTATTCCTTGTGTATCCATTC 215734 ||||| || || || ||||| | ||||| ||| || ||| | | |||||| || Sbjct 1125 GCGGTTGCATATTCAGCTCCTGTTGCAGCTGCTACTGCTGTTTTCTTGATTTATCCAATC 1066 Query 215735 GGTCAGGGTTCTTTCTCTGATGCTATGCCACTTGGAATCTCTGGAACATTCAACTACATG 215794 ||||| || || || |||| |||||| || ||||||||||| || ||||||| ||| Sbjct 1065 GGTCAAGGAAGCTTTTCGGATGGTATGCCTCTAGGAATCTCTGGTACTTTCAACTTTATG 1006 Query 215795 TTTGTTTTCCAGGCTGAGCACAACATTCTGATGCACCCATTCCACATGTTAGGTGTGGCT 215854 |||| || |||||||||||||| ||||| ||||| ||||| ||||||||||| || ||| Sbjct 1005 ATTGTATTTCAGGCTGAGCACAATATTCTTATGCATCCATTTCACATGTTAGGCGTAGCT 946 Query 215855 GGTGTCTTCGGTGGTTCATTGTTCTCTGCAATGCACGGTTCACTTGTTACATCTTCTCTA 215914 ||||| ||||| || || | ||| ||| ||||||||||| | || || ||| | | Sbjct 945 GGTGTATTCGGCGGCTCCCTATTCAGTGCTATGCACGGTTCCTTGGTAACTTCTAGTTTG 886 Query 215915 ATCAGAGAGACAACTGAGCAAGAATCTCAGAACTACGGTTACAAGTTCGGACAAGAGGAG 215974 ||||| || || || || | |||||| ||| | ||||||| || || |||||||| Sbjct 885 ATCAGGGAAACCACAGAAAATGAATCTGCTAACGAAGGTTACAGATTTGGTCAAGAGGAA 826 Query 215975 GAAACATACAACATCGTAGCTGCACACGGTTACTTTGGTCGCCTCATCTTCCAATACGCA 216034 ||||| || || || |||||||| || ||||| ||||| || | ||||||||||| || Sbjct 825 GAAACCTATAATATTGTAGCTGCTCATGGTTATTTTGGCCGATTGATCTTCCAATATGCT 766 Query 216035 TCTTTCAACAACTCAAGAAGTCTTCACTTCTTCCTTGCAGCATTCCCTGTTATTTGTATC 216094 |||||| || || | | | || ||||| || || || | ||||| | ||||| Sbjct 765 AGTTTCAATAATTCTCGTTCTTTACATTTCTTTCTAGCTGCTTGGCCTGTAGTAGGTATC 706 Query 216095 TGGGCAACTGCAATGGGTGTCTCAACTATGGCGTTCAACCTTAACGGTTTCAACTTCAAC 216154 ||| || || | ||| || || ||||| ||||| | || |||||||| |||||| Sbjct 705 TGGTTTACCGCGTTAGGTATCAGTACCATGGCTTTCAATTTAAATGGTTTCAATTTCAAC 646 Query 216155 CAGTCTGTCGTAGACGCATCTGGTAAAGTTATTCCTACTTGGGCAGACGTTCTTAACAGA 216214 || || || || || ||| || ||| ||| ||||| || || ||||| || Sbjct 645 CAATCCGTAGTTGATAGTCAAGGTCGTGTAATTAATACCTGGGCTGATATTATTAACCGA 586 Query 216215 GCAGGACTTGGTATGGAAGTAATGCACGAGCGTAACGCTCACAACTTCCCATTAGACTTG 216274 || |||||||||||||| ||||| || ||||| ||||| |||||||| ||||| | Sbjct 585 GCTAACCTTGGTATGGAAGTTATGCATGAACGTAATGCTCATAACTTCCCTCTAGACCTA 526 Query 216275 GCTGCTGCTGA 216285 ||||| || || Sbjct 525 GCTGCGGCCGA 515 >seq5 Length=26376911 Score = 143 bits (158), Expect = 4e-29 Identities = 210/297 (71%), Gaps = 0/297 (0%) Strand=Plus/Minus Query 215315 ACTGACAATCGTATCTACGTTGGTTGGTTTGGTGTCCTCATGATTCCTTGCCTCCTCGCA 215374 ||||| || ||| | ||| | || ||||||||||| | ||||| ||| | | | | Sbjct 10577358 ACTGAAAACCGTCTTTACATCGGATGGTTTGGTGTTTTGATGATCCCTACCTTATTGACC 10577299 Query 215375 GCTACCACTTGTTTCATCGTAGCATTCATCGCTGCACCTCCTGTCGATATCGACGGAATC 215434 || || || || || | || ||||| ||||| | ||| || ||||| || || || Sbjct 10577298 GCAACTTCTGTATTTATTATCGCTTTCATTGCTGCCCTTCCAGTAGATATTGATGGTATT 10577239 Query 215435 AGAGAGCCAGTTGCTGGTTCTTTAATGTATGGTAACAACATCATCTCTGGTGCTGTTGTA 215494 | ||||| ||| |||| ||| || | || || ||||| || || || |||||| || | Sbjct 10577238 CGTGAGCCTGTTTCTGGATCTCTACTTTACGGAAACAATATTATTTCGGGTGCTATTATT 10577179 Query 215495 CCTAGTTCAAACGCAATCGGATTACACTTCTACCCTATCTGGGAAGCAGCAACAGTTGAC 215554 |||| ||| || ||||| || ||||| ||||| || |||||||| ||| | ||||| Sbjct 10577178 CCTACTTCTGCGGCTATCGGTTTGCACTTTTACCCGATATGGGAAGCGGCATCCGTTGAT 10577119 Query 215555 GAATGGCTCTACAATGGTGGACCTTTCCAACTGGTTATCTTCCACTTCCTCATTGGT 215611 |||||| | |||||||| || |||| |||| || | | |||||| | ||||| Sbjct 10577118 GAATGGTTATACAATGGCGGTCCTTATGAACTAATTGTTCTACACTTCTTACTTGGT 10577062 >seq19 Length=18159812 Score = 138 bits (152), Expect = 2e-27 Identities = 207/294 (70%), Gaps = 0/294 (0%) Strand=Plus/Plus Query 215992 AGCTGCACACGGTTACTTTGGTCGCCTCATCTTCCAATACGCATCTTTCAACAACTCAAG 216051 |||||| || ||||| ||||| || | ||||||||||| || |||||| || || | Sbjct 6185434 AGCTGCTCATGGTTATTTTGGCCGATTGATCTTCCAATATGCTAGTTTCAATAATTCTCG 6185493 Query 216052 AAGTCTTCACTTCTTCCTTGCAGCATTCCCTGTTATTTGTATCTGGGCAACTGCAATGGG 216111 | | || ||||| || || || | ||||| | |||||||| || || | || Sbjct 6185494 TTCTTTACATTTCTTTCTAGCTGCTTGGCCTGTAGTAGGTATCTGGTTTACCGCGTTAGG 6185553 Query 216112 TGTCTCAACTATGGCGTTCAACCTTAACGGTTTCAACTTCAACCAGTCTGTCGTAGACGC 216171 | || || ||||| ||||| | || |||||||| |||||||| || || || || Sbjct 6185554 TATCAGTACCATGGCTTTCAATTTAAATGGTTTCAATTTCAACCAATCCGTAGTTGATAG 6185613 Query 216172 ATCTGGTAAAGTTATTCCTACTTGGGCAGACGTTCTTAACAGAGCAGGACTTGGTATGGA 216231 ||| || ||| ||| ||||| || || ||||| |||| ||||||||||| Sbjct 6185614 TCAAGGTCGTGTAATTAATACCTGGGCTGATATTATTAACCGAGCTAACCTTGGTATGGA 6185673 Query 216232 AGTAATGCACGAGCGTAACGCTCACAACTTCCCATTAGACTTGGCTGCTGCTGA 216285 ||| ||||| || ||||| ||||| |||||||| ||||| | ||||| || || Sbjct 6185674 AGTTATGCATGAACGTAATGCTCATAACTTCCCTCTAGACCTAGCTGCGGCCGA 6185727 >seq3 Length=30153019 Score = 114 bits (126), Expect = 2e-20 Identities = 164/231 (71%), Gaps = 0/231 (0%) Strand=Plus/Plus Query 215315 ACTGACAATCGTATCTACGTTGGTTGGTTTGGTGTCCTCATGATTCCTTGCCTCCTCGCA 215374 ||||| || ||| | ||| | || ||||||||||| | ||||| ||| | | | | Sbjct 19659747 ACTGAAAACCGTCTTTACATCGGATGGTTTGGTGTTTTGATGATCCCTACCTTATTGACC 19659806 Query 215375 GCTACCACTTGTTTCATCGTAGCATTCATCGCTGCACCTCCTGTCGATATCGACGGAATC 215434 || || || || || | || ||||| ||||| ||||| || ||||| || || || Sbjct 19659807 GCAACTTCTGTATTTATTATCGCTTTCATTGCTGCCCCTCCAGTAGATATTGATGGTATT 19659866 Query 215435 AGAGAGCCAGTTGCTGGTTCTTTAATGTATGGTAACAACATCATCTCTGGTGCTGTTGTA 215494 | ||||| ||| |||| ||| || | || || ||||| || || || |||||| || | Sbjct 19659867 CGTGAGCCTGTTTCTGGATCTCTACTTTACGGAAACAATATTATTTCGGGTGCTATTATT 19659926 Query 215495 CCTAGTTCAAACGCAATCGGATTACACTTCTACCCTATCTGGGAAGCAGCA 215545 |||| ||| || ||||| || ||||| ||||| || |||||||| ||| Sbjct 19659927 CCTACTTCTGCGGCTATCGGTTTGCACTTTTACCCGATATGGGAAGCGGCA 19659977 >seq17 Length=21299880 Score = 98.7 bits (108), Expect = 1e-15 Identities = 75/89 (84%), Gaps = 0/89 (0%) Strand=Plus/Plus Query 215783 TTCAACTACATGTTTGTTTTCCAGGCTGAGCACAACATTCTGATGCACCCATTCCACATG 215842 ||||||| ||| |||| || |||||||||||||| ||||| ||||| ||||| |||||| Sbjct 19910963 TTCAACTTTATGATTGTATTTCAGGCTGAGCACAATATTCTTATGCATCCATTTCACATG 19911022 Query 215843 TTAGGTGTGGCTGGTGTCTTCGGTGGTTC 215871 ||||| || |||||||| ||||| || || Sbjct 19911023 TTAGGCGTAGCTGGTGTATTCGGCGGCTC 19911051 Score = 84.2 bits (92), Expect = 3e-11 Identities = 120/168 (71%), Gaps = 1/168 (1%) Strand=Plus/Minus Query 215881 TGCAATGCACGGTTCACTTGTTACATCTTCTCTAATCAGAGAGACAACTGAGCAAGAATC 215940 ||| |||||||||| |||| ||| ||| | | ||||| || || || || | |||| Sbjct 21194274 TGCTATGCACGGTTT-CTTGGTACTTCTAGTTTGATCAGGGAAACCACAGAAAATGAATT 21194216 Query 215941 TCAGAACTACGGTTACAAGTTCGGACAAGAGGAGGAAACATACAACATCGTAGCTGCACA 216000 | ||| | ||||||| || || |||||||| |||| || || || |||||||| | Sbjct 21194215 TGCTAACGAAGGTTACAGATTTGGTCAAGAGGAAGAAATCTATAATATTGTAGCTGCTAA 21194156 Query 216001 CGGTTACTTTGGTCGCCTCATCTTCCAATACGCATCTTTCAACAACTC 216048 ||||| ||||| | | ||||||||||| | |||||| || || Sbjct 21194155 TGGTTATTTTGGCTGATTGATCTTCCAATATGATAGTTTCAATAATTC 21194108 >seq8 Length=25521646 Score = 98.7 bits (108), Expect = 1e-15 Identities = 220/329 (67%), Gaps = 1/329 (0%) Strand=Plus/Plus Query 215411 CCTCCTGTCGATATCGACGGAATCAGAGAGCCAGTTGCTGGTTCTTTAATGTATGGTAAC 215470 ||||| || ||||| || || || | ||||| || |||| ||| || | || || ||| Sbjct 14924682 CCTCCAGTAGATATTGATGGTATTCGTGAGCCTTTT-CTGGATCTCTACTTTACGGAAAC 14924740 Query 215471 AACATCATCTCTGGTGCTGTTGTACCTAGTTCAAACGCAATCGGATTACACTTCTACCCT 215530 || || || || |||||| || | |||| || || || || | ||||| ||| | Sbjct 14924741 AATATTATTTCGGGTGCTATTATTCCTACTTATGCGGCTATAGGTTAGCACTTTTACTCG 14924800 Query 215531 ATCTGGGAAGCAGCAACAGTTGACGAATGGCTCTACAATGGTGGACCTTTCCAACTGGTT 215590 || ||||||| ||| ||||| |||||| | |||||||| || |||| |||| || Sbjct 14924801 ATATGGGAAGTGGCATACGTTGATGAATGGTTATACAATGGCGGTCCTTATTAACTAATT 14924860 Query 215591 ATCTTCCACTTCCTCATTGGTATTTCTGCATACTGCGGAAGACAGTGGGAACTTTCTTAC 215650 | | |||||| | ||||| | || ||| || | ||||||||||| || Sbjct 14924861 GTTCTACACTTCTTACTTGGTGTAGCTTGTTACATAGGTCGCGAGTGGGAACTTAGTTTT 14924920 Query 215651 AGATTAGGTATGAGACCTTGGATCTGTGTTGCTTACTCCGCACCTGTATCTGCTGCCTTT 215710 | || |||||| |||||||| ||||| || || || | ||| | ||| | | Sbjct 14924921 CGTTTGGGTATGCACCCTTGGATTGCGGTTGCATATTCAGCTCTTGTTGCAGCTACGACT 14924980 Query 215711 GCAGTATTCCTTGTGTATCCATTCGGTCA 215739 | | ||| | | |||||| ||||||| Sbjct 14924981 GTTTTTTTCTTGATTTATCCAATCGGTCA 14925009 >seq9 Length=21753712 Score = 89.7 bits (98), Expect = 8e-13 Identities = 135/191 (71%), Gaps = 1/191 (1%) Strand=Plus/Minus Query 216090 GTATCTGGGC-AACTGCAATGGGTGTCTCAACTATGGCGTTCAACCTTAACGGTTTCAAC 216148 |||||||| ||| ||| | ||| || || ||||| |||||| | || |||||||| Sbjct 18376576 GTATCTGGTTTAACCGCATTAGGTATCAGCACCATGGCTTTCAACTTAAATGGTTTCAAT 18376517 Query 216149 TTCAACCAGTCTGTCGTAGACGCATCTGGTAAAGTTATTCCTACTTGGGCAGACGTTCTT 216208 |||||||| | ||| || || ||| || ||| || || || || || || Sbjct 18376516 TTCAACCAATATGTAGTTGATAGTCAAGGTCGTGTAATTAATATCTGAGCTGATATTATT 18376457 Query 216209 AACAGAGCAGGACTTGGTATGGAAGTAATGCACGAGCGTAACGCTCACAACTTCCCATTA 216268 ||| |||| |||||||||||||| || || || ||||| ||||| ||||||| || Sbjct 18376456 AACCGAGCTAACCTTGGTATGGAAGTTATACATGAACGTAATGCTCATAACTTCCATCTA 18376397 Query 216269 GACTTGGCTGC 216279 ||| | ||||| Sbjct 18376396 GACCTAGCTGC 18376386 >seq13 Length=17820680 Score = 86.0 bits (94), Expect = 9e-12 Identities = 91/119 (76%), Gaps = 1/119 (1%) Strand=Plus/Plus Query 215747 TTCTCTGATGCTATGCCACTTGGAATCTCTGGAACATTCAACTACATGTTTGTTTTCCAG 215806 || || |||| |||||| || ||||| |||| | ||||||| ||| |||| | ||| Sbjct 13454416 TTTTCGGATGGTATGCCTCTAGGAATATCTGATGCTTTCAACTCTATGATTGTATGTCAG 13454475 Query 215807 GCTGAGCACAACATTCTGATGCACCCATTCCACATGTTAGGTGTGGCTGGTGTCTTCGG 215865 | || |||||| ||||| |||||| |||| ||||||||||| | || |||| ||||| Sbjct 13454476 GTTG-GCACAATATTCTTATGCACTCATTTCACATGTTAGGCATACCTAGTGTGTTCGG 13454533 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 744955187593040