Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lupinus_20angustifolius_20[refseq_20GCF_5F001865875.1_202016-11-16] 13,573 sequences; 609,203,021 total letters Query= NC_015290.1 Length=182180 Score E Sequences producing significant alignments: (Bits) Value seq664 504 8e-138 seq19 170 2e-37 seq9 120 4e-22 seq5 120 4e-22 seq3 91.5 2e-13 seq17 87.8 2e-12 seq3662 86.0 7e-12 >seq664 Length=18451 Score = 504 bits (558), Expect = 8e-138 Identities = 693/969 (72%), Gaps = 0/969 (0%) Strand=Plus/Minus Query 169699 TGGGTAACAAGCACAAACAACCGCATCTATGTTGGTTGGTTCGGTGTCTTGATGATCCCA 169758 ||| |||| ||||| | ||||| | || | || ||||| ||||| ||||||||||| Sbjct 1497 TGGATAACCAGCACTGAAAACCGTCTTTACATCGGATGGTTTGGTGTTTTGATGATCCCT 1438 Query 169759 TGTCTATTAGCAGCAGCAACCTGCTTTATCGTTGCTTTCATCGCAGCTCCACCTGTGGAC 169818 |||| | ||| | | ||||| | |||||||| || || || || || || Sbjct 1437 ACCTTATTGACCGCAACTTCTGTATTTATTATCGCTTTCATTGCTGCCCCTCCAGTAGAT 1378 Query 169819 ATCGATGGAATCAGAGAACCTGTAGCAGGTTCATTCATGTATGGTAACAACATCATCTCT 169878 || ||||| || | || ||||| | || || | | || || ||||| || || || Sbjct 1377 ATTGATGGTATTCGTGAGCCTGTTTCTGGATCTCTACTTTACGGAAACAATATTATTTCG 1318 Query 169879 GGTGCAGTTGTTCCATCTTCAAACGCAATCGGTCTCCACTTCTATCCTATTTGGGAAGCA 169938 ||||| || |||| |||| || |||||| | ||||| || || || |||||||| Sbjct 1317 GGTGCTATTATTCCTACTTCTGCGGCTATCGGTTTGCACTTTTACCCGATATGGGAAGCG 1258 Query 169939 GCAACTCTAGATGAGTGGTTGTATAACGGTGGTCCTTATCAATTAGTTATCTTCCACTTC 169998 ||| | | ||||| ||||| || || || ||||||||| || || || | | |||||| Sbjct 1257 GCATCCGTTGATGAATGGTTATACAATGGCGGTCCTTATGAACTAATTGTTCTACACTTC 1198 Query 169999 CTTATCGGAATCTCTGCCTACATGGGTAGACAGTGGGAACTATCATACCGTTTAGGTATG 170058 | | || | || ||||||||| | |||||||||| | ||| | |||||| Sbjct 1197 TTACTTGGTGTAGCTTGTTACATGGGTCGTGAGTGGGAACTTAGTTTTCGTCTGGGTATG 1138 Query 170059 CGTCCTTGGATCTGTGTAGCATATTCTGCTCCAGTGTCAGCAGCATTCGCTGTATTCTTA 170118 || |||||||| || |||||||| ||||| || |||| || ||||| ||||| Sbjct 1137 CGCCCTTGGATTGCGGTTGCATATTCAGCTCCTGTTGCAGCTGCTACTGCTGTTTTCTTG 1078 Query 170119 GTGTATCCTTTCGGTCAGGGATCTTTCTCAGACGGAATGCCTCTAGGTATCTCAGGTACA 170178 | ||||| ||||||| ||| || || || || ||||||||||| ||||| ||||| Sbjct 1077 ATTTATCCAATCGGTCAAGGAAGCTTTTCGGATGGTATGCCTCTAGGAATCTCTGGTACT 1018 Query 170179 TTTAACTTCATGTTCGTATTCCAAGCAGAGCACAACATTCTTATGCACCCATTCCATATG 170238 || ||||| ||| | ||||| || || |||||||| ||||||||||| ||||| || ||| Sbjct 1017 TTCAACTTTATGATTGTATTTCAGGCTGAGCACAATATTCTTATGCATCCATTTCACATG 958 Query 170239 GCAGGGGTTGCTGGTATGTTCGGAGGAGCACTCTTCTCAGCAATGCACGGTTCACTTGTA 170298 ||| || |||||| | ||||| || | || ||| || ||||||||||| | ||| Sbjct 957 TTAGGCGTAGCTGGTGTATTCGGCGGCTCCCTATTCAGTGCTATGCACGGTTCCTTGGTA 898 Query 170299 ACATCTTCTCTAATCAGAGAGACAACAGATAACGAGTCACAGAACTATGGATACAAATTC 170358 || ||| | | ||||| || || ||||| || || || ||| | || |||| ||| Sbjct 897 ACTTCTAGTTTGATCAGGGAAACCACAGAAAATGAATCTGCTAACGAAGGTTACAGATTT 838 Query 170359 GGACAAGAAGAAGAAACATACAACATTGTTGCAGCACATGGATACTTTGGTAGACTTATC 170418 || ||||| |||||||| || || ||||| || || ||||| || ||||| || | ||| Sbjct 837 GGTCAAGAGGAAGAAACCTATAATATTGTAGCTGCTCATGGTTATTTTGGCCGATTGATC 778 Query 170419 TTCCAATATGCTAGCTTTAACAATAGTCGTAGTCTTCACTTCTTCCTTGCTACATTCCCT 170478 |||||||||||||| || || ||| |||| | | || ||||| || ||| | | ||| Sbjct 777 TTCCAATATGCTAGTTTCAATAATTCTCGTTCTTTACATTTCTTTCTAGCTGCTTGGCCT 718 Query 170479 GTAGTATGCATCTGGTTAACTTCAATGGGTATTTGCACAATGGCATTTAACCTTAATGGA 170538 |||||| | |||||||| || | | ||||| | || ||||| || || | ||||| Sbjct 717 GTAGTAGGTATCTGGTTTACCGCGTTAGGTATCAGTACCATGGCTTTCAATTTAAATGGT 658 Query 170539 TTTAACTTCAACCAGTCAATCGTAGATGGATCTGGTAAAGTAGTTCCTACATGGGCAGAC 170598 || || |||||||| || | || ||| | ||| ||| || ||| ||||| || Sbjct 657 TTCAATTTCAACCAATCCGTAGTTGATAGTCAAGGTCGTGTAATTAATACCTGGGCTGAT 598 Query 170599 GTTCTTAACAGAGCAAACCTAGGTATGGAAGTAATGCATGAGCGTAATGCACACAACTTC 170658 || ||||| |||| ||||| ||||||||||| |||||||| |||||||| || |||||| Sbjct 597 ATTATTAACCGAGCTAACCTTGGTATGGAAGTTATGCATGAACGTAATGCTCATAACTTC 538 Query 170659 CCACTTGAC 170667 || || ||| Sbjct 537 CCTCTAGAC 529 >seq19 Length=18159812 Score = 170 bits (188), Expect = 2e-37 Identities = 205/279 (73%), Gaps = 0/279 (0%) Strand=Plus/Plus Query 170389 GCAGCACATGGATACTTTGGTAGACTTATCTTCCAATATGCTAGCTTTAACAATAGTCGT 170448 || || ||||| || ||||| || | ||||||||||||||||| || || ||| |||| Sbjct 6185435 GCTGCTCATGGTTATTTTGGCCGATTGATCTTCCAATATGCTAGTTTCAATAATTCTCGT 6185494 Query 170449 AGTCTTCACTTCTTCCTTGCTACATTCCCTGTAGTATGCATCTGGTTAACTTCAATGGGT 170508 | | || ||||| || ||| | | ||||||||| | |||||||| || | | ||| Sbjct 6185495 TCTTTACATTTCTTTCTAGCTGCTTGGCCTGTAGTAGGTATCTGGTTTACCGCGTTAGGT 6185554 Query 170509 ATTTGCACAATGGCATTTAACCTTAATGGATTTAACTTCAACCAGTCAATCGTAGATGGA 170568 || | || ||||| || || | ||||| || || |||||||| || | || ||| | Sbjct 6185555 ATCAGTACCATGGCTTTCAATTTAAATGGTTTCAATTTCAACCAATCCGTAGTTGATAGT 6185614 Query 170569 TCTGGTAAAGTAGTTCCTACATGGGCAGACGTTCTTAACAGAGCAAACCTAGGTATGGAA 170628 ||| ||| || ||| ||||| || || ||||| |||| ||||| ||||||||| Sbjct 6185615 CAAGGTCGTGTAATTAATACCTGGGCTGATATTATTAACCGAGCTAACCTTGGTATGGAA 6185674 Query 170629 GTAATGCATGAGCGTAATGCACACAACTTCCCACTTGAC 170667 || |||||||| |||||||| || |||||||| || ||| Sbjct 6185675 GTTATGCATGAACGTAATGCTCATAACTTCCCTCTAGAC 6185713 >seq9 Length=21753712 Score = 120 bits (132), Expect = 4e-22 Identities = 175/246 (71%), Gaps = 1/246 (0%) Strand=Plus/Minus Query 170423 AATATGCTAGCTTTAACAATAGTCGTAGTCTTCACTTCTTCCTTGCTACATTCCCTGTAG 170482 |||||||||| || || ||| | || | | || ||||| || | | | ||||||| Sbjct 18376639 AATATGCTAGTTTCAATAATTCTTGTTCTTTACATTTCTTTCTAGTTGTTTGGCCTGTAG 18376580 Query 170483 TATGCATCTGGTT-AACTTCAATGGGTATTTGCACAATGGCATTTAACCTTAATGGATTT 170541 || | |||||||| ||| || | ||||| |||| ||||| || ||| | ||||| || Sbjct 18376579 TAGGTATCTGGTTTAACCGCATTAGGTATCAGCACCATGGCTTTCAACTTAAATGGTTTC 18376520 Query 170542 AACTTCAACCAGTCAATCGTAGATGGATCTGGTAAAGTAGTTCCTACATGGGCAGACGTT 170601 || |||||||| | | || ||| | ||| ||| || || || || || || Sbjct 18376519 AATTTCAACCAATATGTAGTTGATAGTCAAGGTCGTGTAATTAATATCTGAGCTGATATT 18376460 Query 170602 CTTAACAGAGCAAACCTAGGTATGGAAGTAATGCATGAGCGTAATGCACACAACTTCCCA 170661 ||||| |||| ||||| ||||||||||| || ||||| |||||||| || ||||||| Sbjct 18376459 ATTAACCGAGCTAACCTTGGTATGGAAGTTATACATGAACGTAATGCTCATAACTTCCAT 18376400 Query 170662 CTTGAC 170667 || ||| Sbjct 18376399 CTAGAC 18376394 >seq5 Length=26376911 Score = 120 bits (132), Expect = 4e-22 Identities = 230/339 (68%), Gaps = 0/339 (0%) Strand=Plus/Minus Query 169699 TGGGTAACAAGCACAAACAACCGCATCTATGTTGGTTGGTTCGGTGTCTTGATGATCCCA 169758 ||| ||| ||||| | ||||| | || | || ||||| ||||| ||||||||||| Sbjct 10577370 TGGATAATCAGCACTGAAAACCGTCTTTACATCGGATGGTTTGGTGTTTTGATGATCCCT 10577311 Query 169759 TGTCTATTAGCAGCAGCAACCTGCTTTATCGTTGCTTTCATCGCAGCTCCACCTGTGGAC 169818 |||| | ||| | | ||||| | |||||||| || || | || || || Sbjct 10577310 ACCTTATTGACCGCAACTTCTGTATTTATTATCGCTTTCATTGCTGCCCTTCCAGTAGAT 10577251 Query 169819 ATCGATGGAATCAGAGAACCTGTAGCAGGTTCATTCATGTATGGTAACAACATCATCTCT 169878 || ||||| || | || ||||| | || || | | || || ||||| || || || Sbjct 10577250 ATTGATGGTATTCGTGAGCCTGTTTCTGGATCTCTACTTTACGGAAACAATATTATTTCG 10577191 Query 169879 GGTGCAGTTGTTCCATCTTCAAACGCAATCGGTCTCCACTTCTATCCTATTTGGGAAGCA 169938 ||||| || |||| |||| || |||||| | ||||| || || || |||||||| Sbjct 10577190 GGTGCTATTATTCCTACTTCTGCGGCTATCGGTTTGCACTTTTACCCGATATGGGAAGCG 10577131 Query 169939 GCAACTCTAGATGAGTGGTTGTATAACGGTGGTCCTTATCAATTAGTTATCTTCCACTTC 169998 ||| | | ||||| ||||| || || || ||||||||| || || || | | |||||| Sbjct 10577130 GCATCCGTTGATGAATGGTTATACAATGGCGGTCCTTATGAACTAATTGTTCTACACTTC 10577071 Query 169999 CTTATCGGAATCTCTGCCTACATGGGTAGACAGTGGGAA 170037 | | || | || ||||||||| | |||||||| Sbjct 10577070 TTACTTGGTGTAGCTTGTTACATGGGTCGTGAGTGGGAA 10577032 Score = 100 bits (110), Expect = 3e-16 Identities = 149/210 (71%), Gaps = 1/210 (0%) Strand=Plus/Minus Query 170458 TTCTTCCTTGCTACATTCCCTGTAGTATGCATCTGGTTAACTTCAATGGGTATTTGCACA 170517 || || || ||| | || ||| ||||| | ||||||| | || | |||||| | || Sbjct 10060459 TTTTTTCTAGCTGC-TTGCCTATAGTAGGTGTCTGGTTTATCGCATTAGGTATTAGTACT 10060401 Query 170518 ATGGCATTTAACCTTAATGGATTTAACTTCAACCAGTCAATCGTAGATGGATCTGGTAAA 170577 ||| | || || | ||||| || || |||||||| || || || ||| | ||| Sbjct 10060400 ATGACTTTCAATTTAAATGGTTTCAATTTCAACCAATCCATAGTTGATAGTCAAGGTCGT 10060341 Query 170578 GTAGTTCCTACATGGGCAGACGTTCTTAACAGAGCAAACCTAGGTATGGAAGTAATGCAT 170637 ||| || ||| ||| | || ||||| |||| ||||| ||||||||||| |||||| Sbjct 10060340 GTAATTAATACCTGGACTATTATTATTAACCGAGCTAACCTTGGTATGGAAGTTATGCAT 10060281 Query 170638 GAGCGTAATGCACACAACTTCCCACTTGAC 170667 || | |||||| || |||||||| || ||| Sbjct 10060280 GAACATAATGCTCATAACTTCCCTCTAGAC 10060251 >seq3 Length=30153019 Score = 91.5 bits (100), Expect = 2e-13 Identities = 166/243 (68%), Gaps = 0/243 (0%) Strand=Plus/Plus Query 169699 TGGGTAACAAGCACAAACAACCGCATCTATGTTGGTTGGTTCGGTGTCTTGATGATCCCA 169758 ||| |||| ||||| | ||||| | || | || ||||| ||||| ||||||||||| Sbjct 19659735 TGGATAACCAGCACTGAAAACCGTCTTTACATCGGATGGTTTGGTGTTTTGATGATCCCT 19659794 Query 169759 TGTCTATTAGCAGCAGCAACCTGCTTTATCGTTGCTTTCATCGCAGCTCCACCTGTGGAC 169818 |||| | ||| | | ||||| | |||||||| || || || || || || Sbjct 19659795 ACCTTATTGACCGCAACTTCTGTATTTATTATCGCTTTCATTGCTGCCCCTCCAGTAGAT 19659854 Query 169819 ATCGATGGAATCAGAGAACCTGTAGCAGGTTCATTCATGTATGGTAACAACATCATCTCT 169878 || ||||| || | || ||||| | || || | | || || ||||| || || || Sbjct 19659855 ATTGATGGTATTCGTGAGCCTGTTTCTGGATCTCTACTTTACGGAAACAATATTATTTCG 19659914 Query 169879 GGTGCAGTTGTTCCATCTTCAAACGCAATCGGTCTCCACTTCTATCCTATTTGGGAAGCA 169938 ||||| || |||| |||| || |||||| | ||||| || || || |||||||| Sbjct 19659915 GGTGCTATTATTCCTACTTCTGCGGCTATCGGTTTGCACTTTTACCCGATATGGGAAGCG 19659974 Query 169939 GCA 169941 ||| Sbjct 19659975 GCA 19659977 Score = 82.4 bits (90), Expect = 9e-11 Identities = 72/90 (80%), Gaps = 0/90 (0%) Strand=Plus/Minus Query 170578 GTAGTTCCTACATGGGCAGACGTTCTTAACAGAGCAAACCTAGGTATGGAAGTAATGCAT 170637 ||| || ||| ||||| || || ||||| |||| ||| | ||||||||||| |||||| Sbjct 15965365 GTAATTAATACTTGGGCTGATATTATTAACCGAGCTAACATTGGTATGGAAGTTATGCAT 15965306 Query 170638 GAGCGTAATGCACACAACTTCCCACTTGAC 170667 || |||||||| || |||||||| || ||| Sbjct 15965305 GAACGTAATGCTCATAACTTCCCTCTAGAC 15965276 >seq17 Length=21299880 Score = 87.8 bits (96), Expect = 2e-12 Identities = 119/165 (72%), Gaps = 1/165 (1%) Strand=Plus/Minus Query 170278 GCAATGCACGGTTCACTTGTAACATCTTCTCTAATCAGAGAGACAACAGATAACGAGTCA 170337 || |||||||||| |||| || ||| | | ||||| || || ||||| || || | Sbjct 21194273 GCTATGCACGGTTT-CTTGGTACTTCTAGTTTGATCAGGGAAACCACAGAAAATGAATTT 21194215 Query 170338 CAGAACTATGGATACAAATTCGGACAAGAAGAAGAAACATACAACATTGTTGCAGCACAT 170397 ||| | || |||| ||| || ||||| ||||||| || || ||||| || || || Sbjct 21194214 GCTAACGAAGGTTACAGATTTGGTCAAGAGGAAGAAATCTATAATATTGTAGCTGCTAAT 21194155 Query 170398 GGATACTTTGGTAGACTTATCTTCCAATATGCTAGCTTTAACAAT 170442 || || ||||| || | ||||||||||||| ||| || || ||| Sbjct 21194154 GGTTATTTTGGCTGATTGATCTTCCAATATGATAGTTTCAATAAT 21194110 >seq3662 Length=122019 Score = 86.0 bits (94), Expect = 7e-12 Identities = 130/185 (70%), Gaps = 0/185 (0%) Strand=Plus/Plus Query 170476 CCTGTAGTATGCATCTGGTTAACTTCAATGGGTATTTGCACAATGGCATTTAACCTTAAT 170535 ||||||||| | |||||||| | | | ||||| | || || || || || | ||| Sbjct 4492 CCTGTAGTAGGTATCTGGTTTATCGCGTTAGGTATCAGTACTATAGCTTTCAATTTAAAT 4551 Query 170536 GGATTTAACTTCAACCAGTCAATCGTAGATGGATCTGGTAAAGTAGTTCCTACATGGGCA 170595 || ||||| ||||| | || | || ||| | ||| ||| || ||| | | | Sbjct 4552 GGTTTTAATTTCAATTAATCCGTAGTTGATTGTCAAGGTCGTGTAATTAATACTTAGACT 4611 Query 170596 GACGTTCTTAACAGAGCAAACCTAGGTATGGAAGTAATGCATGAGCGTAATGCACACAAC 170655 || || ||| | |||| ||||| ||||||||||| || ||||| |||||||| || ||| Sbjct 4612 GATATTATTAGCTGAGCTAACCTTGGTATGGAAGTTATACATGAACGTAATGCTCATAAC 4671 Query 170656 TTCCC 170660 ||||| Sbjct 4672 TTCCC 4676 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 582749112551200