Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Lupinus_20angustifolius_20[refseq_20GCF_5F001865875.1_202016-11-16]
13,573 sequences; 609,203,021 total letters
Query= NC_015960.1
Length=175699
Score E
Sequences producing significant alignments: (Bits) Value
seq9 143 3e-29
seq11 127 2e-24
seq1 98.7 1e-15
seq2896 84.2 2e-11
>seq9
Length=21753712
Score = 143 bits (158), Expect = 3e-29
Identities = 385/588 (65%), Gaps = 17/588 (3%)
Strand=Plus/Plus
Query 18958 AAACATGCAAAATCACAATGTAGTCCCTCGTCTCTACTTATCAATTCATTAGAAAATGTT 19017
||||| || ||||||||||| || || || |||| |||||| || || || |||||
Sbjct 19303917 AAACAAGCGAAATCACAATGAAGCCCTTCATCTCGCGATATCAACTCGTTCGAGAATGTA 19303976
Query 19018 AAACCAGGCATCAGTCCTCttttttttAACCAGAATATAGAAGCAAATGATCCAGAAAAG 19077
| ||| ||||| | || | |||||| | ||| ||||| | | || |||||| ||
Sbjct 19303977 AGACCGGGCATTAACCCGCGTTTTTTAAGCCAAAATATCGCACAGAAGCTTCCAGAGAAA 19304036
Query 19078 AATATACCTTCTACTGCTGCAAAAGCAACTAGTCTTTCTCCATAACTAGCATCATTATTA 19137
||||| ||||| || ||||||||||| || | |||| | | | ||| | |
Sbjct 19304037 AATATTCCTTCAACGCAAGCAAAAGCAACGAGGCGTTCTGC-------GAAGGATTCTGA 19304089
Query 19138 ----TGAATCCATTTCAGTGCCCAATCAGCCTTCTTTTTTACACATGGCATTGTCTCTAT 19193
| |||||| | ||||| ||||| |||||| | ||||| || || || || ||
Sbjct 19304090 ACCGTCGATCCATCGTAACGCCCATTCAGCTTTCTTTGTAACACAAGGAATGGTTTCAAT 19304149
Query 19194 AGAATTAAATA---GATACATACGCTCATCTGTATCTTTAACATATGCATCTATCAATAA 19250
| | |||| | | || ||| | | ||||| | ||||| || | | |
Sbjct 19304150 CGCGTGGAATAATCGGTTTTTA---TCAGCGGAGTCTTTGATATATGTTTCGAGAAGGAG 19304206
Query 19251 ACTGTACATTTCTGAATGAATATTTTCTATAGCCATCTGAAATCCGTAAAAACATCTTGC 19310
|| ||||| || || || |||||||| || || || || || ||||| ||| | ||
Sbjct 19304207 GCTATACATCTCAGAGTGGATATTTTCAATGGCGATTTGGAAGCCGTAGAAAGCACGCGC 19304266
Query 19311 TTCTGTTATCTGTACTTCACTACAAAATCTTTCGACCAAATTTTCATTAACTATTCCATC 19370
|| | | || | || | | || ||| || | | |||||| ||| ||||| ||
Sbjct 19304267 CTCAGCGACTTGAATTTGAGTCATGAACCTTCCGGCGAGGTTTTCAAGAACGATTCCGTC 19304326
Query 19371 ACTAGCTGCAAAAAATGCTAATACATGTTTAATAAAATGTTTTTCATCTGAGGTTAATGT 19430
|| || || || || | | ||||| || || || |||||| ||| | |
Sbjct 19304327 GGAGGCGGCGAAGAAGGCGAGGATGTGTTTGATGAAGTGGCGTTCATCGTCGGTGAGAGA 19304386
Query 19431 ATTCCAATCATTAATATCTTTAGATAAATCTACTTCTTCAACTGTCCAAAAAGAAGCCTC 19490
|| ||||| || ||||| ||| | ||| |||||||| | ||||| || ||||| ||
Sbjct 19304387 ATCCCAATGGCGAAGATCTTGAGAAAGATCGACTTCTTCGGCGGTCCAGAATGAAGCTTC 19304446
Query 19491 TGCTTTTTTATACATGTTCCATATATCACGATATTGTATAGGAAATAT 19538
||||| || ||||| | ||| || | | | ||||| || ||||| ||
Sbjct 19304447 GGCTTTCTTGTACATTTCCCAGATCTGAGGGTATTGGATTGGAAACAT 19304494
>seq11
Length=35963958
Score = 127 bits (140), Expect = 2e-24
Identities = 380/586 (65%), Gaps = 3/586 (1%)
Strand=Plus/Minus
Query 18953 ACATCAAACATGCAAAATCACAATGTAGTCCCTCGTCTCTACTTATCAATTCATTAGAAA 19012
||| ||| || || ||||||||||| || || || |||| |||||| || || || |
Sbjct 2850741 ACAACAAGCAAGCGAAATCACAATGAAGCCCTTCATCTCGCGATATCAACTCGTTTGAGA 2850682
Query 19013 ATGTTAAACCAGGCATCAGTCCTCttttttttAACCAGAATATAGAAGCAAATGATCCAG 19072
| || | |||||||| || ||||| || || | ||||||||||| | || |||||
Sbjct 2850681 AGGTAAGTCCAGGCATAAGACCTCTCTTCTTAAGCCAGAATATAGCACAGAAGCTTCCAG 2850622
Query 19073 AAAAGAATATACCTTCTACTGCTGCAAAAGCAACTAGTCTTTCTCCATAACTAGCATCAT 19132
| ||||| || ||||| || ||||| ||||| || | || | | | ||
Sbjct 2850621 AGAAGAAAATTCCTTCAACACAAGCAAACGCAACAAGGCGCTCAGCGAA---GGATTCTG 2850565
Query 19133 TATTATGAATCCATTTCAGTGCCCAATCAGCCTTCTTTTTTACACATGGCATTGTCTCTA 19192
| || ||||| | ||||| ||||| ||| | ||||| || ||||| || |
Sbjct 2850564 AACCATCGATCCAACGTAACGCCCACTCAGCTTTCCTCGCAACACAAGGGATTGTTTCAA 2850505
Query 19193 TAGAATTAAATAGATACATACGCTCATCTGTATCTTTAACATATGCATCTATCAATAAAC 19252
| | || | | | ||| | | ||| || | ||||| || | | | ||
Sbjct 2850504 CCGCGTGGAACAAACGGTTTTTATCAGCCGAATCCTTGATATATGTTTCAAGAAGGAGAC 2850445
Query 19253 TGTACATTTCTGAATGAATATTTTCTATAGCCATCTGAAATCCGTAAAAACATCTTGCTT 19312
||||||| || ||||| |||||||| ||||| || || |||||||| ||| | || |
Sbjct 2850444 TGTACATCTCAGAATGGATATTTTCAATAGCAATTTGGAATCCGTAGAAAGCACGCGCCT 2850385
Query 19313 CTGTTATCTGTACTTCACTACAAAATCTTTCGACCAAATTTTCATTAACTATTCCATCAC 19372
| | | || | |||| | ||| ||| || | | |||||| ||| || || |||
Sbjct 2850384 CAGCGACTTGGATTTCAGTCATAAACCTTCCGGCAAGGTTTTCAAGAACGATACCGTCAG 2850325
Query 19373 TAGCTGCAAAAAATGCTAATACATGTTTAATAAAATGTTTTTCATCTGAGGTTAATGTAT 19432
|| || || || || | || ||||| | ||| || ||| | ||| | | |
Sbjct 2850324 AGGCGGCGAAGAAAGCGAGGACGTGTTTGACAAAGTGGCGTTCGCCGTCGGTGAGGTTCT 2850265
Query 19433 TCCAATCATTAATATCTTTAGATAAATCTACTTCTTCAACTGTCCAAAAAGAAGCCTCTG 19492
||| | | || | ||| | ||| ||||| || | ||||| ||||| || || |
Sbjct 2850264 CCCAGTGGCGGACGTCCTGAGAAAGATCAACTTCCTCGGCGGTCCAGAAAGATGCTTCGG 2850205
Query 19493 CTTTTTTATACATGTTCCATATATCACGATATTGTATAGGAAATAT 19538
|||| |||||||| | ||| || | | | ||||| || ||||| ||
Sbjct 2850204 CTTTCTTATACATCTCCCAGATCTGAGGGTATTGAATTGGAAACAT 2850159
Score = 107 bits (118), Expect = 2e-18
Identities = 157/222 (71%), Gaps = 0/222 (0%)
Strand=Plus/Minus
Query 48360 CCTCCTTGATCTATATATCTGGCAGTATTGTTATAAACTCTTAACATTGGGACAATACCA 48419
|| |||||||| | ||| | ||||||| ||| |||| | | |||||| |||||||||
Sbjct 31406824 CCACCTTGATCAACATAGCGAGCAGTATCATTAAAAACACGCAGCATTGGAACAATACCA 31406765
Query 48420 TTTGATATACCATTGGTTCCCGAAATATAACTTCCACTAGCTCTTATATTACTAATTGAA 48479
|| ||| | ||||| |||||| || ||||| || | |||| || || || |||
Sbjct 31406764 TTGGATGTCCCATTAGTTCCCCGGATGTAACTGCCTGTGGCTCGGATGTTGTGAACAGAA 31406705
Query 48480 ATACCTATACCACCTGCCATTTTAGATATTAGAGCACACCGTTTAAGGGTATCATAAATT 48539
| ||| || || || || ||| || ||||||| || | |||||||| |||
Sbjct 31406704 ACACCAATTCCTCCAGCTGATTTGCTGATCGCAGCACACTCCTTCAAAGTATCATATATT 31406645
Query 48540 CCTTCTATACTATCATCTATCATATTTAATAGAAAACAACTA 48581
|| ||||||||||||||| ||||| | || || ||||||
Sbjct 31406644 CCCTCTATACTATCATCTTTCATACACACAAGGAAGCAACTA 31406603
Score = 93.3 bits (102), Expect = 5e-14
Identities = 163/232 (70%), Gaps = 8/232 (3%)
Strand=Plus/Minus
Query 48600 GTTCCTGAATTAAATAATGTTGGAGATGCATGAATAAACCATTTCTCTGATAACAATTTA 48659
|| || | ||| || | || |||||||||||| | |||||| ||| ||| | || |
Sbjct 31406441 GTCCCGGCATTGAACAGAGTAGGAGATGCATGAGTGAACCATCTCTGTGACATCAGATGG 31406382
Query 48660 TATGTTTCAATAACAGAATCTAT---ATCCCATTGATGTATACCTATAGATACACGCATT 48716
||||||| | | |||||||||| |||| ||| || || || | ||| || | |||
Sbjct 31406381 TATGTTTTGACAGCAGAATCTATGTTATCC--TTG-TGAATTCCAACAGAAACCCTCATC 31406325
Query 48717 AACATATATTGAGGTCTTTCAACAATTTTGTTATT-TATTTTCAAAAGATATGATTTTTC 48775
||||| | |||||||||||||||| |||| || | ||||| || || || | ||
Sbjct 31406324 AACATGTGCTGAGGTCTTTCAACAA-CTTGTCCTTCAACCTTCAAGAGGTAGGACCTCTC 31406266
Query 48776 CAATGTTTTAAAACCAAAATAGTTGTATGAAAAGTCGTTATCATTAATAATT 48827
| ||||| |||||||| || | || |||||| |||||| || |||
Sbjct 31406265 AAGGGTTTTGAAACCAAAGTAATCATAGTCAAAGTCCCTATCATATATGATT 31406214
>seq1
Length=36457581
Score = 98.7 bits (108), Expect = 1e-15
Identities = 155/222 (70%), Gaps = 0/222 (0%)
Strand=Plus/Plus
Query 48360 CCTCCTTGATCTATATATCTGGCAGTATTGTTATAAACTCTTAACATTGGGACAATACCA 48419
|| || ||||| | ||| | |||||||| || | || | | |||||| |||||||||
Sbjct 33689080 CCACCCTGATCAACATAGCGGGCAGTATCATTGAACACACGCAGCATTGGAACAATACCA 33689139
Query 48420 TTTGATATACCATTGGTTCCCGAAATATAACTTCCACTAGCTCTTATATTACTAATTGAA 48479
|| ||| | ||||| ||||| ||| ||||| || | || | || || || |||
Sbjct 33689140 TTGGATGTCCCATTAGTTCCACGAATGTAACTCCCTGTGGCACGAATGTTGTGAACAGAA 33689199
Query 48480 ATACCTATACCACCTGCCATTTTAGATATTAGAGCACACCGTTTAAGGGTATCATAAATT 48539
| ||| || || || || ||| ||| ||||||| || | |||||||| |||
Sbjct 33689200 ACACCAATTCCTCCAGCTGATTTGCTGATTGCAGCACACTCCTTCAAAGTATCATATATT 33689259
Query 48540 CCTTCTATACTATCATCTATCATATTTAATAGAAAACAACTA 48581
|| ||||||||||||||| ||||| | || || ||||||
Sbjct 33689260 CCCTCTATACTATCATCTTTCATACACACAAGGAAGCAACTA 33689301
Score = 86.0 bits (94), Expect = 7e-12
Identities = 153/221 (69%), Gaps = 2/221 (1%)
Strand=Plus/Plus
Query 48600 GTTCCTGAATTAAATAATGTTGGAGATGCATGAATAAACCATTTCTCTGATAACAATTTA 48659
||||| | ||| |||| || |||||||||||| | |||||| ||| || | | |
Sbjct 33689444 GTTCCGGCATTGAATAGAGTAGGAGATGCATGAGTGAACCATCTCTGAGACATTAGGTGG 33689503
Query 48660 TATGTTTCAATAACAGAATCTATATC-CCATTGATGTATACCTATAGATACACGCATTAA 48718
|| |||| | | ||||||| || || | ||| || || || | ||| || | ||| ||
Sbjct 33689504 TAAGTTTTGACAGCAGAATCAATGTCATCCTTG-TGAATTCCAACAGAAACCCTCATCAA 33689562
Query 48719 CATATATTGAGGTCTTTCAACAATTTTGTTATTTATTTTCAAAAGATATGATTTTTCCAA 48778
||| | |||||||||||||||| ||| | | ||||| || || || | || |
Sbjct 33689563 CATGTGCTGAGGTCTTTCAACAACTTTTCCTTCAACCTTCAACAGGTAGGACCTCTCAAG 33689622
Query 48779 TGTTTTAAAACCAAAATAGTTGTATGAAAAGTCGTTATCAT 48819
||||| |||||||| || | || |||||| ||||||
Sbjct 33689623 GGTTTTGAAACCAAAGTAATCATAGTCAAAGTCCCTATCAT 33689663
>seq2896
Length=25968
Score = 84.2 bits (92), Expect = 2e-11
Identities = 139/202 (69%), Gaps = 2/202 (1%)
Strand=Plus/Minus
Query 47342 TAGTACTCTACGGCTATATATATTACTTGTATATGGTTCTATAGATTCATTATTTCCAAA 47401
||| |||||||| || || ||||| ||||||||||| | | | |||||||| ||||
Sbjct 6757 TAGAACTCTACGACTGTAGATATTTGAAGTATATGGTTCAAAACACTCATTATTACCAAG 6698
Query 47402 AATTTGAGCAGTTGATGCTGTAGGCATGGATGCAACTAATAAG-CTATTTCTTACTCCAT 47460
||| || ||| ||||| |||||||| | ||||| || ||| |||||| || ||||
Sbjct 6697 AATCTGGCTAGTAGATGCAGTAGGCATAGGGGCAAC-AAGAAGTGAATTTCTCACACCAT 6639
Query 47461 ATTTTTGTATCTNNNNNNNNNNNNGTTTCCAATCCCAAAGATCTGATGGAACAACATTCC 47520
|||| |||| |||||||||||| ||| ||| || ||| ||
Sbjct 6638 TTTTTAATATCCTCTCCCTTAGTGCATTCCAATCCCAACGATTTGAGGGTGTCACACCCC 6579
Query 47521 AAAAATCATATTGAAGAATTCC 47542
| | || ||||||||||||
Sbjct 6578 ACATGTCTGGTTGAAGAATTCC 6557
Score = 82.4 bits (90), Expect = 9e-11
Identities = 140/203 (69%), Gaps = 0/203 (0%)
Strand=Plus/Minus
Query 48360 CCTCCTTGATCTATATATCTGGCAGTATTGTTATAAACTCTTAACATTGGGACAATACCA 48419
|| |||||||| | ||| | ||||||| || | || | | |||||| | ||| |||
Sbjct 4778 CCACCTTGATCAACATAGCGCGCAGTATCATTGAACACACGCAGCATTGGAATAATGCCA 4719
Query 48420 TTTGATATACCATTGGTTCCCGAAATATAACTTCCACTAGCTCTTATATTACTAATTGAA 48479
|| ||| | ||||| || || ||| ||||| || | || | ||||| || ||
Sbjct 4718 TTGGATGTCCCATTTGTCCCACGAATGTAACTGCCTGTGGCACGAATATTGTGAACAGAG 4659
Query 48480 ATACCTATACCACCTGCCATTTTAGATATTAGAGCACACCGTTTAAGGGTATCATAAATT 48539
| ||| || || || || |||| || | ||||||| ||| | || ||||| ||
Sbjct 4658 ACACCAATTCCTCCAGCTGATTTACTGATGACAGCACACTCTTTCAAAGTTTCATATATA 4599
Query 48540 CCTTCTATACTATCATCTATCAT 48562
|| ||||||||||||||| ||||
Sbjct 4598 CCCTCTATACTATCATCTTTCAT 4576
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 562013431215720
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