Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lupinus_20angustifolius_20[refseq_20GCF_5F001865875.1_202016-11-16] 13,573 sequences; 609,203,021 total letters Query= NC_016656.1 Length=45890 Score E Sequences producing significant alignments: (Bits) Value seq664 509 5e-140 seq19 188 2e-43 seq5 167 7e-37 seq1 161 3e-35 seq9 134 4e-27 seq3 132 1e-26 seq8 111 5e-20 seq3662 86.0 2e-12 >seq664 Length=18451 Score = 509 bits (564), Expect = 5e-140 Identities = 707/985 (72%), Gaps = 4/985 (0%) Strand=Plus/Minus Query 25802 TTTTGTGAGTGGGTTACAAGTACTGAGAACCGTCTCTATGTGGGATGGTTCGGGGTGCTT 25861 || ||| | ||| | || || ||||| |||||||| || | |||||||| || || | Sbjct 1506 TTCTGTAACTGGATAACCAGCACTGAAAACCGTCTTTACATCGGATGGTTTGGTGTTTTG 1447 Query 25862 ATGATACCCTGCTTACTCGCAGCCACTACATGT-TTTATACTTGCCTTCATCGCAGCACC 25920 ||||| || |||| | | || ||| | ||| ||||| | || ||||| || || || Sbjct 1446 ATGATCCCTACCTTATTGACCGCAACTTC-TGTATTTATTATCGCTTTCATTGCTGCCCC 1388 Query 25921 GCCTGTAGATATAGATGGCATACGTGAGCCAGTTTCCGGCTCGTTAATGTACGGAAACAA 25980 || |||||||| ||||| || |||||||| ||||| || || || | ||||||||||| Sbjct 1387 TCCAGTAGATATTGATGGTATTCGTGAGCCTGTTTCTGGATCTCTACTTTACGGAAACAA 1328 Query 25981 TATAATATCAGGAGCAGTCGTCCCCTCCTCTAACGCAATCGGACTACATTTTTACCCGAT 26040 ||| || || || || | | || | ||| || ||||| | || ||||||||||| Sbjct 1327 TATTATTTCGGGTGCTATTATTCCTACTTCTGCGGCTATCGGTTTGCACTTTTACCCGAT 1268 Query 26041 CTGGGAAGCTGGCACAC-TGGACGAGTGGCTATACAATGGCGGACCATATCAACTCATTA 26099 |||||||| |||| | | || || ||| ||||||||||||| || ||| |||| ||| Sbjct 1267 ATGGGAAGC-GGCATCCGTTGATGAATGGTTATACAATGGCGGTCCTTATGAACTAATTG 1209 Query 26100 TCTTCCACTTCTTAATAGGAGTAGCAGCATATGCAGGGAGACAGTGGGAACTATCTTACA 26159 | | ||||||||| | || ||||| || || | |||||||||| || Sbjct 1208 TTCTACACTTCTTACTTGGTGTAGCTTGTTACATGGGTCGTGAGTGGGAACTTAGTTTTC 1149 Query 26160 GACTAGGAATGAGACCATGGATATTTGTTGCATATACAGCACCACTATCCGCAGCTCTCG 26219 | || || ||| | || ||||| ||||||||| |||| || | | || ||| | Sbjct 1148 GTCTGGGTATGCGCCCTTGGATTGCGGTTGCATATTCAGCTCCTGTTGCAGCTGCTACTG 1089 Query 26220 CAGTGTTCTTAGTTTATCCTTTCGGACAAGGGAGTTTTAGTGATGGAATGCCTCTTGGTA 26279 | || ||||| ||||||| |||| ||||| || ||| ||||| |||||||| || | Sbjct 1088 CTGTTTTCTTGATTTATCCAATCGGTCAAGGAAGCTTTTCGGATGGTATGCCTCTAGGAA 1029 Query 26280 TCTCTGGTACTTTTAACTTTATGTTCGTATTCCAAGCAGAACATAATATACTCATGCACC 26339 ||||||||||||| ||||||||| | ||||| || || || || ||||| || ||||| | Sbjct 1028 TCTCTGGTACTTTCAACTTTATGATTGTATTTCAGGCTGAGCACAATATTCTTATGCATC 969 Query 26340 CATTCCATATGGCTGGTGTTGCTGGGGTTTTCGGTGGAGCTCTTTTCGCTGCTATGCACG 26399 |||| || ||| || || ||||| || ||||| || | || ||| ||||||||||| Sbjct 968 CATTTCACATGTTAGGCGTAGCTGGTGTATTCGGCGGCTCCCTATTCAGTGCTATGCACG 909 Query 26400 GAAGTTTGGTTACTTCCTCACTTATTGCAGAAACGACAGAGGAAGTCTCACAGAATTATG 26459 | ||||| ||||| | || ||||| ||||| | | || || | | Sbjct 908 GTTCCTTGGTAACTTCTAGTTTGATCAGGGAAACCACAGAAAATGAATCTGCTAACGAAG 849 Query 26460 GCTATAAGTTTGGGCAAGATGAAGAGACATATAATATTGTCGCTGCACACGGGTACTTTG 26519 | || | ||||| ||||| ||||| || ||||||||||| ||||| || || || |||| Sbjct 848 GTTACAGATTTGGTCAAGAGGAAGAAACCTATAATATTGTAGCTGCTCATGGTTATTTTG 789 Query 26520 GGAGATTAATTTTTCAGTATGCGAGTTTTAATAACAGCCGTTCTCTTCATTTCTTTCTTG 26579 | |||| || || || ||||| ||||| ||||| |||||| | ||||||||||| | Sbjct 788 GCCGATTGATCTTCCAATATGCTAGTTTCAATAATTCTCGTTCTTTACATTTCTTTCTAG 729 Query 26580 CTACTTGGCCGGTTGTTGGCATATGGCTGACATCTATGGGTATCTGCACAATGGCATTTA 26639 || ||||||| || || || || ||| | || | | |||||| | || ||||| || | Sbjct 728 CTGCTTGGCCTGTAGTAGGTATCTGGTTTACCGCGTTAGGTATCAGTACCATGGCTTTCA 669 Query 26640 ACCTAAATGGTTTTAACTTTAACCAGTCAGTAGTAGATGTTAATGGAAAGATAATACCTA 26699 | |||||||||| || || ||||| || ||||| ||| | | || |||| || Sbjct 668 ATTTAAATGGTTTCAATTTCAACCAATCCGTAGTTGATAGTCAAGGTCGTGTAATTAATA 609 Query 26700 CATGGGCTGATGTATTAAACCGAGCTAACCTCGGCTTTGAAGTTATGCACGAGCGTAATG 26759 | ||||||||| | | |||||||||||||| || | ||||||||||| || ||||||| Sbjct 608 CCTGGGCTGATATTATTAACCGAGCTAACCTTGGTATGGAAGTTATGCATGAACGTAATG 549 Query 26760 CTCATAACTTTCCACTTGACTTAGC 26784 |||||||||| || || ||| |||| Sbjct 548 CTCATAACTTCCCTCTAGACCTAGC 524 >seq19 Length=18159812 Score = 188 bits (208), Expect = 2e-43 Identities = 212/284 (75%), Gaps = 0/284 (0%) Strand=Plus/Plus Query 26501 GCTGCACACGGGTACTTTGGGAGATTAATTTTTCAGTATGCGAGTTTTAATAACAGCCGT 26560 ||||| || || || ||||| |||| || || || ||||| ||||| ||||| ||| Sbjct 6185435 GCTGCTCATGGTTATTTTGGCCGATTGATCTTCCAATATGCTAGTTTCAATAATTCTCGT 6185494 Query 26561 TCTCTTCATTTCTTTCTTGCTACTTGGCCGGTTGTTGGCATATGGCTGACATCTATGGGT 26620 ||| | ||||||||||| ||| ||||||| || || || || ||| | || | | ||| Sbjct 6185495 TCTTTACATTTCTTTCTAGCTGCTTGGCCTGTAGTAGGTATCTGGTTTACCGCGTTAGGT 6185554 Query 26621 ATCTGCACAATGGCATTTAACCTAAATGGTTTTAACTTTAACCAGTCAGTAGTAGATGTT 26680 ||| | || ||||| || || |||||||||| || || ||||| || ||||| ||| | Sbjct 6185555 ATCAGTACCATGGCTTTCAATTTAAATGGTTTCAATTTCAACCAATCCGTAGTTGATAGT 6185614 Query 26681 AATGGAAAGATAATACCTACATGGGCTGATGTATTAAACCGAGCTAACCTCGGCTTTGAA 26740 | || |||| ||| ||||||||| | | |||||||||||||| || | ||| Sbjct 6185615 CAAGGTCGTGTAATTAATACCTGGGCTGATATTATTAACCGAGCTAACCTTGGTATGGAA 6185674 Query 26741 GTTATGCACGAGCGTAATGCTCATAACTTTCCACTTGACTTAGC 26784 |||||||| || ||||||||||||||||| || || ||| |||| Sbjct 6185675 GTTATGCATGAACGTAATGCTCATAACTTCCCTCTAGACCTAGC 6185718 >seq5 Length=26376911 Score = 167 bits (184), Expect = 7e-37 Identities = 235/325 (72%), Gaps = 4/325 (1%) Strand=Plus/Minus Query 25802 TTTTGTGAGTGGGTTACAAGTACTGAGAACCGTCTCTATGTGGGATGGTTCGGGGTGCTT 25861 || ||| | ||| | | || ||||| |||||||| || | |||||||| || || | Sbjct 10577379 TTCTGTAACTGGATAATCAGCACTGAAAACCGTCTTTACATCGGATGGTTTGGTGTTTTG 10577320 Query 25862 ATGATACCCTGCTTACTCGCAGCCACTACATGT-TTTATACTTGCCTTCATCGCAGCACC 25920 ||||| || |||| | | || ||| | ||| ||||| | || ||||| || || | Sbjct 10577319 ATGATCCCTACCTTATTGACCGCAACTTC-TGTATTTATTATCGCTTTCATTGCTGCCCT 10577261 Query 25921 GCCTGTAGATATAGATGGCATACGTGAGCCAGTTTCCGGCTCGTTAATGTACGGAAACAA 25980 || |||||||| ||||| || |||||||| ||||| || || || | ||||||||||| Sbjct 10577260 TCCAGTAGATATTGATGGTATTCGTGAGCCTGTTTCTGGATCTCTACTTTACGGAAACAA 10577201 Query 25981 TATAATATCAGGAGCAGTCGTCCCCTCCTCTAACGCAATCGGACTACATTTTTACCCGAT 26040 ||| || || || || | | || | ||| || ||||| | || ||||||||||| Sbjct 10577200 TATTATTTCGGGTGCTATTATTCCTACTTCTGCGGCTATCGGTTTGCACTTTTACCCGAT 10577141 Query 26041 CTGGGAAGCTGGCACAC-TGGACGAGTGGCTATACAATGGCGGACCATATCAACTCATTA 26099 |||||||| |||| | | || || ||| ||||||||||||| || ||| |||| ||| Sbjct 10577140 ATGGGAAGC-GGCATCCGTTGATGAATGGTTATACAATGGCGGTCCTTATGAACTAATTG 10577082 Query 26100 TCTTCCACTTCTTAATAGGAGTAGC 26124 | | ||||||||| | || ||||| Sbjct 10577081 TTCTACACTTCTTACTTGGTGTAGC 10577057 Score = 93.3 bits (102), Expect = 1e-14 Identities = 155/219 (71%), Gaps = 5/219 (2%) Strand=Plus/Minus Query 26568 ATTTCTTTCTTGCTACTTGGCCGGTTGTTGGCATATGGCTGACATCTATGGGTATCTGCA 26627 |||| ||||| ||| |||| || | || || | ||| | | | | ||||| | | Sbjct 10060461 ATTTTTTTCTAGCTGCTTG-CCTATAGTAGGTGTCTGGTTTATCGCATTAGGTATTAGTA 10060403 Query 26628 CAATGGCATTTAACCTAAATGGTTTTAACTTTAACCAGTCAGTAGTAGATGTTAATGGAA 26687 | ||| | || || |||||||||| || || ||||| || |||| ||| | | || Sbjct 10060402 CTATGACTTTCAATTTAAATGGTTTCAATTTCAACCAATCCATAGTTGATAGTCAAGGTC 10060343 Query 26688 AGATAATACCTACATGGGCTGATGTATTA--AACCGAGCTAACCTCGGCTTTGAAGTTAT 26745 |||| ||| ||| || || ||||| |||||||||||||| || | |||||||| Sbjct 10060342 GTGTAATTAATACCTGGACT-AT-TATTATTAACCGAGCTAACCTTGGTATGGAAGTTAT 10060285 Query 26746 GCACGAGCGTAATGCTCATAACTTTCCACTTGACTTAGC 26784 ||| || | ||||||||||||||| || || ||| |||| Sbjct 10060284 GCATGAACATAATGCTCATAACTTCCCTCTAGACCTAGC 10060246 >seq1 Length=36457581 Score = 161 bits (178), Expect = 3e-35 Identities = 192/260 (74%), Gaps = 3/260 (1%) Strand=Plus/Plus Query 26527 AATTTTTCAGT---ATGCGAGTTTTAATAACAGCCGTTCTCTTCATTTCTTTCTTGCTAC 26583 ||||||| ||| |||| ||||| |||| |||||| | ||||||||| | ||| | Sbjct 19599332 AATTTTTTAGTTTTATGCTAGTTTCGATAAGTCTCGTTCTTTACATTTCTTTTTAGCTGC 19599391 Query 26584 TTGGCCGGTTGTTGGCATATGGCTGACATCTATGGGTATCTGCACAATGGCATTTAACCT 26643 |||||| || || || || ||| | || | | |||| | | || ||||| || || | Sbjct 19599392 TTGGCCTGTAGTAGGTATCTGGTTTACCGCGTTAGGTACCAGTACCATGGCTTTCAATTT 19599451 Query 26644 AAATGGTTTTAACTTTAACCAGTCAGTAGTAGATGTTAATGGAAAGATAATACCTACATG 26703 ||||||||| || || ||||| || |||| ||| | | || |||| || ||| Sbjct 19599452 AAATGGTTTCAATTTCAACCAATCCATAGTTGATAGTCAAGGTCGTGTAATTAATATATG 19599511 Query 26704 GGCTGATGTATTAAACCGAGCTAACCTCGGCTTTGAAGTTATGCACGAGCGTAATGCTCA 26763 ||||||| | |||||||||||||||| ||| | ||||||||||| || ||||||||||| Sbjct 19599512 GGCTGATATTATAAACCGAGCTAACCTTGGCATGGAAGTTATGCATGAACGTAATGCTCA 19599571 Query 26764 TAACTTTCCACTTGACTTAG 26783 |||||| || || ||| ||| Sbjct 19599572 TAACTTCCCTCTAGACCTAG 19599591 >seq9 Length=21753712 Score = 134 bits (148), Expect = 4e-27 Identities = 180/249 (72%), Gaps = 1/249 (0%) Strand=Plus/Minus Query 26537 TATGCGAGTTTTAATAACAGCCGTTCTCTTCATTTCTTTCTTGCTACTTGGCCGGTTGTT 26596 ||||| ||||| ||||| ||||| | ||||||||||| | | |||||| || || Sbjct 18376637 TATGCTAGTTTCAATAATTCTTGTTCTTTACATTTCTTTCTAGTTGTTTGGCCTGTAGTA 18376578 Query 26597 GGCATATGGCTGA-CATCTATGGGTATCTGCACAATGGCATTTAACCTAAATGGTTTTAA 26655 || || ||| | | | | | |||||| |||| ||||| || ||| |||||||||| || Sbjct 18376577 GGTATCTGGTTTAACCGCATTAGGTATCAGCACCATGGCTTTCAACTTAAATGGTTTCAA 18376518 Query 26656 CTTTAACCAGTCAGTAGTAGATGTTAATGGAAAGATAATACCTACATGGGCTGATGTATT 26715 || ||||| | ||||| ||| | | || |||| || || |||||| | | Sbjct 18376517 TTTCAACCAATATGTAGTTGATAGTCAAGGTCGTGTAATTAATATCTGAGCTGATATTAT 18376458 Query 26716 AAACCGAGCTAACCTCGGCTTTGAAGTTATGCACGAGCGTAATGCTCATAACTTTCCACT 26775 |||||||||||||| || | |||||||| || || ||||||||||||||||| | || Sbjct 18376457 TAACCGAGCTAACCTTGGTATGGAAGTTATACATGAACGTAATGCTCATAACTTCCATCT 18376398 Query 26776 TGACTTAGC 26784 ||| |||| Sbjct 18376397 AGACCTAGC 18376389 >seq3 Length=30153019 Score = 132 bits (146), Expect = 1e-26 Identities = 184/254 (72%), Gaps = 3/254 (1%) Strand=Plus/Plus Query 25802 TTTTGTGAGTGGGTTACAAGTACTGAGAACCGTCTCTATGTGGGATGGTTCGGGGTGCTT 25861 || ||| | ||| | || || ||||| |||||||| || | |||||||| || || | Sbjct 19659726 TTCTGTAACTGGATAACCAGCACTGAAAACCGTCTTTACATCGGATGGTTTGGTGTTTTG 19659785 Query 25862 ATGATACCCTGCTTACTCGCAGCCACTACATGT-TTTATACTTGCCTTCATCGCAGCACC 25920 ||||| || |||| | | || ||| | ||| ||||| | || ||||| || || || Sbjct 19659786 ATGATCCCTACCTTATTGACCGCAACTTC-TGTATTTATTATCGCTTTCATTGCTGCCCC 19659844 Query 25921 GCCTGTAGATATAGATGGCATACGTGAGCCAGTTTCCGGCTCGTTAATGTACGGAAACAA 25980 || |||||||| ||||| || |||||||| ||||| || || || | ||||||||||| Sbjct 19659845 TCCAGTAGATATTGATGGTATTCGTGAGCCTGTTTCTGGATCTCTACTTTACGGAAACAA 19659904 Query 25981 TATAATATCAGGAGCAGTCGTCCCCTCCTCTAACGCAATCGGACTACATTTTTACCCGAT 26040 ||| || || || || | | || | ||| || ||||| | || ||||||||||| Sbjct 19659905 TATTATTTCGGGTGCTATTATTCCTACTTCTGCGGCTATCGGTTTGCACTTTTACCCGAT 19659964 Query 26041 CTGGGAAGCTGGCA 26054 |||||||| |||| Sbjct 19659965 ATGGGAAGC-GGCA 19659977 Score = 80.6 bits (88), Expect = 8e-11 Identities = 67/82 (82%), Gaps = 0/82 (0%) Strand=Plus/Minus Query 26698 TACATGGGCTGATGTATTAAACCGAGCTAACCTCGGCTTTGAAGTTATGCACGAGCGTAA 26757 ||| ||||||||| | | |||||||||||| | || | ||||||||||| || ||||| Sbjct 15965357 TACTTGGGCTGATATTATTAACCGAGCTAACATTGGTATGGAAGTTATGCATGAACGTAA 15965298 Query 26758 TGCTCATAACTTTCCACTTGAC 26779 |||||||||||| || || ||| Sbjct 15965297 TGCTCATAACTTCCCTCTAGAC 15965276 >seq8 Length=25521646 Score = 111 bits (122), Expect = 5e-20 Identities = 151/207 (73%), Gaps = 3/207 (1%) Strand=Plus/Plus Query 25919 CCGCCTGTAGATATAGATGGCATACGTGAGCCAGTTTCCGGCTCGTTAATGTACGGAAAC 25978 || || |||||||| ||||| || |||||||| |||| || || || | ||||||||| Sbjct 14924682 CCTCCAGTAGATATTGATGGTATTCGTGAGCCT-TTTCTGGATCTCTACTTTACGGAAAC 14924740 Query 25979 AATATAATATCAGGAGCAGTCGTCCCCTCCTCTAACGCAATCGGACTACATTTTTACCCG 26038 ||||| || || || || | | || | | | || || || || |||||| || Sbjct 14924741 AATATTATTTCGGGTGCTATTATTCCTACTTATGCGGCTATAGGTTAGCACTTTTACTCG 14924800 Query 26039 ATCTGGGAAGCTGGCACAC-TGGACGAGTGGCTATACAATGGCGGACCATATCAACTCAT 26097 || ||||||| ||||| || | || || ||| ||||||||||||| || ||| |||| || Sbjct 14924801 ATATGGGAAG-TGGCATACGTTGATGAATGGTTATACAATGGCGGTCCTTATTAACTAAT 14924859 Query 26098 TATCTTCCACTTCTTAATAGGAGTAGC 26124 | | | ||||||||| | || ||||| Sbjct 14924860 TGTTCTACACTTCTTACTTGGTGTAGC 14924886 >seq3662 Length=122019 Score = 86.0 bits (94), Expect = 2e-12 Identities = 119/167 (71%), Gaps = 0/167 (0%) Strand=Plus/Plus Query 26618 GGTATCTGCACAATGGCATTTAACCTAAATGGTTTTAACTTTAACCAGTCAGTAGTAGAT 26677 |||||| | || || || || || ||||||||||||| || || | || ||||| ||| Sbjct 4522 GGTATCAGTACTATAGCTTTCAATTTAAATGGTTTTAATTTCAATTAATCCGTAGTTGAT 4581 Query 26678 GTTAATGGAAAGATAATACCTACATGGGCTGATGTATTAAACCGAGCTAACCTCGGCTTT 26737 | | || |||| ||| | | ||||| | | | | |||||||||| || | Sbjct 4582 TGTCAAGGTCGTGTAATTAATACTTAGACTGATATTATTAGCTGAGCTAACCTTGGTATG 4641 Query 26738 GAAGTTATGCACGAGCGTAATGCTCATAACTTTCCACTTGACTTAGC 26784 |||||||| || || ||||||||||||||||| || | ||| |||| Sbjct 4642 GAAGTTATACATGAACGTAATGCTCATAACTTCCCTTTAGACCTAGC 4688 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 146702750730552