Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lupinus_20angustifolius_20[refseq_20GCF_5F001865875.1_202016-11-16] 13,573 sequences; 609,203,021 total letters Query= NC_016924.1 Length=185139 Score E Sequences producing significant alignments: (Bits) Value seq11 152 6e-32 seq9 136 5e-27 seq2 107 2e-18 >seq11 Length=35963958 Score = 152 bits (168), Expect = 6e-32 Identities = 389/587 (66%), Gaps = 5/587 (1%) Strand=Plus/Minus Query 37168 ACAATAAACATGCAAAATCACAATGTAAACCTTCATCTCTACTTATCAATTCATTAGAAA 37227 |||| || || || ||||||||||| | |||||||||| |||||| || || || | Sbjct 2850741 ACAACAAGCAAGCGAAATCACAATGAAGCCCTTCATCTCGCGATATCAACTCGTTTGAGA 2850682 Query 37228 AGGTTAATCCTGGCATTAAACCTCtttttttAATCCAAAATATTGCTGCAAAAG-ATCCA 37286 |||| | ||| ||||| | |||||| || |||| ||| ||||| || || ||| |||| Sbjct 2850681 AGGTAAGTCCAGGCATAAGACCTCTCTTCTTAAGCCAGAATATAGC-ACAGAAGCTTCCA 2850623 Query 37287 GAAAAGAAAATACCTTCAACTGCTGCAAATGCTACAAGACGTGTACCGAAAGTTGAACTA 37346 || |||||||| |||||||| ||||| || ||||| || | |||| | | || Sbjct 2850622 GAGAAGAAAATTCCTTCAACACAAGCAAACGCAACAAGGCGCTCAGCGAAGGAT--TCT- 2850566 Query 37347 TAATCAGAAATCCAtttttttGTCCAATCTGCCTTTAATTTAACACATTCAATTGTTTCA 37406 || || ||||| | | ||| || || || |||||| ||||||||| Sbjct 2850565 GAACCATCGATCCAACGTAACGCCCACTCAGCTTTCCTCGCAACACAAGGGATTGTTTCA 2850506 Query 37407 ATTGCTTTTAAGAGAAAGtttttttCTTCACTATCTGTTATATAAGTATCAATTAGTAAA 37466 | || | || | | |||||| || | ||| | ||||| || |||| || | | Sbjct 2850505 ACCGCGTGGAACAAACGGTTTTTATCAGCCGAATCCTTGATATATGTTTCAAGAAGGAGA 2850446 Query 37467 CTATACATTTCAGAGTGAATATTTTCAATAGCTATCTGAAAACCATAAAAACACCTAGCT 37526 || ||||| ||||| || |||||||||||||| || || || || || ||| | || Sbjct 2850445 CTGTACATCTCAGAATGGATATTTTCAATAGCAATTTGGAATCCGTAGAAAGCACGCGCC 2850386 Query 37527 TCAGATAATTGAACATCGTTAAAAAACCTCTTAGCTAAGTTTTCATTAACTATCCCATCA 37586 |||| | ||| | || | | |||||| || | ||||||| ||| || || ||| Sbjct 2850385 TCAGCGACTTGGATTTCAGTCATAAACCTTCCGGCAAGGTTTTCAAGAACGATACCGTCA 2850326 Query 37587 CTAGCTGCAAAGAAAGCAAGAACATATTTTATAAAATGTCTTTCATCATTTGATAATTTT 37646 || || |||||||| || || | ||| | ||| || | ||| | | | | || Sbjct 2850325 GAGGCGGCGAAGAAAGCGAGGACGTGTTTGACAAAGTGGCGTTCGCCGTCGGTGAGGTTC 2850266 Query 37647 TTCCAATCATTAATATCTTTTGATAAATCAACTTCATCAACGGTCCAAAAACTTGCCAAT 37706 | ||| | | || | || | ||||||||| || ||||||| ||| ||| Sbjct 2850265 TCCCAGTGGCGGACGTCCTGAGAAAGATCAACTTCCTCGGCGGTCCAGAAAGATGCTTCG 2850206 Query 37707 GCACGTTTATACATCGTCCAAATATCATTATGTTGTATTGGAAATAT 37753 || ||||||||| ||| || | | | ||| |||||||| || Sbjct 2850205 GCTTTCTTATACATCTCCCAGATCTGAGGGTATTGAATTGGAAACAT 2850159 >seq9 Length=21753712 Score = 136 bits (150), Expect = 5e-27 Identities = 350/528 (66%), Gaps = 5/528 (1%) Strand=Plus/Plus Query 37170 AATAAACATGCAAAATCACAATGTAAACCTTCATCTCTACTTATCAATTCATTAGAAAAG 37229 |||||||| || ||||||||||| | |||||||||| |||||| || || || || Sbjct 19303914 AATAAACAAGCGAAATCACAATGAAGCCCTTCATCTCGCGATATCAACTCGTTCGAGAAT 19303973 Query 37230 GTTAATCCTGGCATTAAACCTCtttttttAATCCAAAATATTGCTGCAAAAG-ATCCAGA 37288 || | || |||||||| || | |||||||| ||||||||| || || ||| |||||| Sbjct 19303974 GTAAGACCGGGCATTAACCCGCGTTTTTTAAGCCAAAATATCGC-ACAGAAGCTTCCAGA 19304032 Query 37289 AAAGAAAATACCTTCAACTGCTGCAAATGCTACAAGACGTGTACCGAAAGTTGAACTATA 37348 || || || |||||||| ||||| || || || ||| |||| | | || | Sbjct 19304033 GAAAAATATTCCTTCAACGCAAGCAAAAGCAACGAGGCGTTCTGCGAAGGAT--TCT-GA 19304089 Query 37349 ATCAGAAATCCAtttttttGTCCAATCTGCCTTTAATTTAACACATTCAATTGTTTCAAT 37408 | | |||||| | | ||| || || || | ||||||| ||| |||||||| Sbjct 19304090 ACCGTCGATCCATCGTAACGCCCATTCAGCTTTCTTTGTAACACAAGGAATGGTTTCAAT 19304149 Query 37409 TGCTTTTAAGAGAAAGtttttttCTTCACTATCTGTTATATAAGTATCAATTAGTAAACT 37468 || | || | |||||| || | ||| | ||||| || || | || | || Sbjct 19304150 CGCGTGGAATAATCGGTTTTTATCAGCGGAGTCTTTGATATATGTTTCGAGAAGGAGGCT 19304209 Query 37469 ATACATTTCAGAGTGAATATTTTCAATAGCTATCTGAAAACCATAAAAACACCTAGCTTC 37528 |||||| |||||||| ||||||||||| || || || || || || ||| | || || Sbjct 19304210 ATACATCTCAGAGTGGATATTTTCAATGGCGATTTGGAAGCCGTAGAAAGCACGCGCCTC 19304269 Query 37529 AGATAATTGAACATCGTTAAAAAACCTCTTAGCTAAGTTTTCATTAACTATCCCATCACT 37588 || | ||||| | | | ||||| || | ||||||| ||| || || || Sbjct 19304270 AGCGACTTGAATTTGAGTCATGAACCTTCCGGCGAGGTTTTCAAGAACGATTCCGTCGGA 19304329 Query 37589 AGCTGCAAAGAAAGCAAGAACATATTTTATAAAATGTCTTTCATCATTTGATAATTTTTT 37648 || || ||||| || || | | ||| || || || | |||||| | | | | Sbjct 19304330 GGCGGCGAAGAAGGCGAGGATGTGTTTGATGAAGTGGCGTTCATCGTCGGTGAGAGAATC 19304389 Query 37649 CCAATCATTAATATCTTTTGATAAATCAACTTCATCAACGGTCCAAAA 37696 ||||| || ||||| || | ||| ||||| || ||||||| || Sbjct 19304390 CCAATGGCGAAGATCTTGAGAAAGATCGACTTCTTCGGCGGTCCAGAA 19304437 >seq2 Length=24697652 Score = 107 bits (118), Expect = 2e-18 Identities = 305/464 (66%), Gaps = 5/464 (1%) Strand=Plus/Plus Query 37168 ACAATAAACATGCAAAATCACAATGTAAACCTTCATCTCTACTTATCAATTCATTAGAAA 37227 |||| || || || |||||||| |||||||| ||||||| || || || || || | Sbjct 21046905 ACAACAAGCACGCGAAATCACAGTGTAAACCCTCATCTCGCGAGATTAACTCGTTTGAGA 21046964 Query 37228 AGGTTAATCCTGGCATTAAACCTCtttttttAATCCAAAATATTGCTGCAAAAGAT-CCA 37286 |||| | || ||||| | |||| ||| || | ||||||||| || || ||| | ||| Sbjct 21046965 AGGTAAGACCAGGCATAAGGCCTCGTTTCTTCAACCAAAATATCGCA-CAGAAGCTTCCA 21047023 Query 37287 GAAAAGAAAATACCTTCAACTGCTGCAAATGCTACAAGACGTGTACCGAAAGTTGAACTA 37346 || ||||||||||||||||| ||||| || || |||||| | |||| | | || Sbjct 21047024 GAGAAGAAAATACCTTCAACACAAGCAAACGCAACGAGACGTTCAGCGAAGGAT--TCT- 21047080 Query 37347 TAATCAGAAATCCAtttttttGTCCAATCTGCCTTTAATTTAACACATTCAATTGTTTCA 37406 || | ||||| | ||| || || ||| ||| || || || || Sbjct 21047081 GAACCGTCGATCCAACGAAGCGCCCACTCAGCTTTTTTAGCAACGCAAGGTATCGTCTCT 21047140 Query 37407 ATTGCTTTTAAGAGAAAGtttttttCTTCACTATCTGTTATATAAGTATCAATTAGTAAA 37466 ||||| | || | ||||| || | |||| | ||||| || |||| || | | Sbjct 21047141 ATTGCGTGGAATAATCGATTTTTATCAGCGGAATCTTTGATATACGTTTCAAGAAGGAGA 21047200 Query 37467 CTATACATTTCAGAGTGAATATTTTCAATAGCTATCTGAAAACCATAAAAACACCTAGCT 37526 |||||||| ||||| || ||||| || || || ||||| || || || || | || Sbjct 21047201 CTATACATCTCAGAATGGATATTCTCGATTGCGATCTGGAAGCCGTAGAATGCACGCGCC 21047260 Query 37527 TCAGATAATTGAACATCGTTAAAAAACCTCTTAGCTAAGTTTTCATTAACTATCCCATCA 37586 |||| | ||| | || | | ||||| || | ||||||| || || || || Sbjct 21047261 TCAGCGACTTGTATCTCTGTCATGAACCTTCCGGCGAGGTTTTCAAGGACGATTCCGTCG 21047320 Query 37587 CTAGCTGCAAAGAAAGCAAGAACATATTTTATAAAATGTCTTTC 37630 ||| || |||||||| || | | ||| || || || | ||| Sbjct 21047321 GAAGCGGCGAAGAAAGCGAGGATGTGTTTGATGAAGTGGCGTTC 21047364 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 592216306050920