Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Lupinus_20angustifolius_20[refseq_20GCF_5F001865875.1_202016-11-16]
13,573 sequences; 609,203,021 total letters
Query= NC_016924.1
Length=185139
Score E
Sequences producing significant alignments: (Bits) Value
seq11 152 6e-32
seq9 136 5e-27
seq2 107 2e-18
>seq11
Length=35963958
Score = 152 bits (168), Expect = 6e-32
Identities = 389/587 (66%), Gaps = 5/587 (1%)
Strand=Plus/Minus
Query 37168 ACAATAAACATGCAAAATCACAATGTAAACCTTCATCTCTACTTATCAATTCATTAGAAA 37227
|||| || || || ||||||||||| | |||||||||| |||||| || || || |
Sbjct 2850741 ACAACAAGCAAGCGAAATCACAATGAAGCCCTTCATCTCGCGATATCAACTCGTTTGAGA 2850682
Query 37228 AGGTTAATCCTGGCATTAAACCTCtttttttAATCCAAAATATTGCTGCAAAAG-ATCCA 37286
|||| | ||| ||||| | |||||| || |||| ||| ||||| || || ||| ||||
Sbjct 2850681 AGGTAAGTCCAGGCATAAGACCTCTCTTCTTAAGCCAGAATATAGC-ACAGAAGCTTCCA 2850623
Query 37287 GAAAAGAAAATACCTTCAACTGCTGCAAATGCTACAAGACGTGTACCGAAAGTTGAACTA 37346
|| |||||||| |||||||| ||||| || ||||| || | |||| | | ||
Sbjct 2850622 GAGAAGAAAATTCCTTCAACACAAGCAAACGCAACAAGGCGCTCAGCGAAGGAT--TCT- 2850566
Query 37347 TAATCAGAAATCCAtttttttGTCCAATCTGCCTTTAATTTAACACATTCAATTGTTTCA 37406
|| || ||||| | | ||| || || || |||||| |||||||||
Sbjct 2850565 GAACCATCGATCCAACGTAACGCCCACTCAGCTTTCCTCGCAACACAAGGGATTGTTTCA 2850506
Query 37407 ATTGCTTTTAAGAGAAAGtttttttCTTCACTATCTGTTATATAAGTATCAATTAGTAAA 37466
| || | || | | |||||| || | ||| | ||||| || |||| || | |
Sbjct 2850505 ACCGCGTGGAACAAACGGTTTTTATCAGCCGAATCCTTGATATATGTTTCAAGAAGGAGA 2850446
Query 37467 CTATACATTTCAGAGTGAATATTTTCAATAGCTATCTGAAAACCATAAAAACACCTAGCT 37526
|| ||||| ||||| || |||||||||||||| || || || || || ||| | ||
Sbjct 2850445 CTGTACATCTCAGAATGGATATTTTCAATAGCAATTTGGAATCCGTAGAAAGCACGCGCC 2850386
Query 37527 TCAGATAATTGAACATCGTTAAAAAACCTCTTAGCTAAGTTTTCATTAACTATCCCATCA 37586
|||| | ||| | || | | |||||| || | ||||||| ||| || || |||
Sbjct 2850385 TCAGCGACTTGGATTTCAGTCATAAACCTTCCGGCAAGGTTTTCAAGAACGATACCGTCA 2850326
Query 37587 CTAGCTGCAAAGAAAGCAAGAACATATTTTATAAAATGTCTTTCATCATTTGATAATTTT 37646
|| || |||||||| || || | ||| | ||| || | ||| | | | | ||
Sbjct 2850325 GAGGCGGCGAAGAAAGCGAGGACGTGTTTGACAAAGTGGCGTTCGCCGTCGGTGAGGTTC 2850266
Query 37647 TTCCAATCATTAATATCTTTTGATAAATCAACTTCATCAACGGTCCAAAAACTTGCCAAT 37706
| ||| | | || | || | ||||||||| || ||||||| ||| |||
Sbjct 2850265 TCCCAGTGGCGGACGTCCTGAGAAAGATCAACTTCCTCGGCGGTCCAGAAAGATGCTTCG 2850206
Query 37707 GCACGTTTATACATCGTCCAAATATCATTATGTTGTATTGGAAATAT 37753
|| ||||||||| ||| || | | | ||| |||||||| ||
Sbjct 2850205 GCTTTCTTATACATCTCCCAGATCTGAGGGTATTGAATTGGAAACAT 2850159
>seq9
Length=21753712
Score = 136 bits (150), Expect = 5e-27
Identities = 350/528 (66%), Gaps = 5/528 (1%)
Strand=Plus/Plus
Query 37170 AATAAACATGCAAAATCACAATGTAAACCTTCATCTCTACTTATCAATTCATTAGAAAAG 37229
|||||||| || ||||||||||| | |||||||||| |||||| || || || ||
Sbjct 19303914 AATAAACAAGCGAAATCACAATGAAGCCCTTCATCTCGCGATATCAACTCGTTCGAGAAT 19303973
Query 37230 GTTAATCCTGGCATTAAACCTCtttttttAATCCAAAATATTGCTGCAAAAG-ATCCAGA 37288
|| | || |||||||| || | |||||||| ||||||||| || || ||| ||||||
Sbjct 19303974 GTAAGACCGGGCATTAACCCGCGTTTTTTAAGCCAAAATATCGC-ACAGAAGCTTCCAGA 19304032
Query 37289 AAAGAAAATACCTTCAACTGCTGCAAATGCTACAAGACGTGTACCGAAAGTTGAACTATA 37348
|| || || |||||||| ||||| || || || ||| |||| | | || |
Sbjct 19304033 GAAAAATATTCCTTCAACGCAAGCAAAAGCAACGAGGCGTTCTGCGAAGGAT--TCT-GA 19304089
Query 37349 ATCAGAAATCCAtttttttGTCCAATCTGCCTTTAATTTAACACATTCAATTGTTTCAAT 37408
| | |||||| | | ||| || || || | ||||||| ||| ||||||||
Sbjct 19304090 ACCGTCGATCCATCGTAACGCCCATTCAGCTTTCTTTGTAACACAAGGAATGGTTTCAAT 19304149
Query 37409 TGCTTTTAAGAGAAAGtttttttCTTCACTATCTGTTATATAAGTATCAATTAGTAAACT 37468
|| | || | |||||| || | ||| | ||||| || || | || | ||
Sbjct 19304150 CGCGTGGAATAATCGGTTTTTATCAGCGGAGTCTTTGATATATGTTTCGAGAAGGAGGCT 19304209
Query 37469 ATACATTTCAGAGTGAATATTTTCAATAGCTATCTGAAAACCATAAAAACACCTAGCTTC 37528
|||||| |||||||| ||||||||||| || || || || || || ||| | || ||
Sbjct 19304210 ATACATCTCAGAGTGGATATTTTCAATGGCGATTTGGAAGCCGTAGAAAGCACGCGCCTC 19304269
Query 37529 AGATAATTGAACATCGTTAAAAAACCTCTTAGCTAAGTTTTCATTAACTATCCCATCACT 37588
|| | ||||| | | | ||||| || | ||||||| ||| || || ||
Sbjct 19304270 AGCGACTTGAATTTGAGTCATGAACCTTCCGGCGAGGTTTTCAAGAACGATTCCGTCGGA 19304329
Query 37589 AGCTGCAAAGAAAGCAAGAACATATTTTATAAAATGTCTTTCATCATTTGATAATTTTTT 37648
|| || ||||| || || | | ||| || || || | |||||| | | | |
Sbjct 19304330 GGCGGCGAAGAAGGCGAGGATGTGTTTGATGAAGTGGCGTTCATCGTCGGTGAGAGAATC 19304389
Query 37649 CCAATCATTAATATCTTTTGATAAATCAACTTCATCAACGGTCCAAAA 37696
||||| || ||||| || | ||| ||||| || ||||||| ||
Sbjct 19304390 CCAATGGCGAAGATCTTGAGAAAGATCGACTTCTTCGGCGGTCCAGAA 19304437
>seq2
Length=24697652
Score = 107 bits (118), Expect = 2e-18
Identities = 305/464 (66%), Gaps = 5/464 (1%)
Strand=Plus/Plus
Query 37168 ACAATAAACATGCAAAATCACAATGTAAACCTTCATCTCTACTTATCAATTCATTAGAAA 37227
|||| || || || |||||||| |||||||| ||||||| || || || || || |
Sbjct 21046905 ACAACAAGCACGCGAAATCACAGTGTAAACCCTCATCTCGCGAGATTAACTCGTTTGAGA 21046964
Query 37228 AGGTTAATCCTGGCATTAAACCTCtttttttAATCCAAAATATTGCTGCAAAAGAT-CCA 37286
|||| | || ||||| | |||| ||| || | ||||||||| || || ||| | |||
Sbjct 21046965 AGGTAAGACCAGGCATAAGGCCTCGTTTCTTCAACCAAAATATCGCA-CAGAAGCTTCCA 21047023
Query 37287 GAAAAGAAAATACCTTCAACTGCTGCAAATGCTACAAGACGTGTACCGAAAGTTGAACTA 37346
|| ||||||||||||||||| ||||| || || |||||| | |||| | | ||
Sbjct 21047024 GAGAAGAAAATACCTTCAACACAAGCAAACGCAACGAGACGTTCAGCGAAGGAT--TCT- 21047080
Query 37347 TAATCAGAAATCCAtttttttGTCCAATCTGCCTTTAATTTAACACATTCAATTGTTTCA 37406
|| | ||||| | ||| || || ||| ||| || || || ||
Sbjct 21047081 GAACCGTCGATCCAACGAAGCGCCCACTCAGCTTTTTTAGCAACGCAAGGTATCGTCTCT 21047140
Query 37407 ATTGCTTTTAAGAGAAAGtttttttCTTCACTATCTGTTATATAAGTATCAATTAGTAAA 37466
||||| | || | ||||| || | |||| | ||||| || |||| || | |
Sbjct 21047141 ATTGCGTGGAATAATCGATTTTTATCAGCGGAATCTTTGATATACGTTTCAAGAAGGAGA 21047200
Query 37467 CTATACATTTCAGAGTGAATATTTTCAATAGCTATCTGAAAACCATAAAAACACCTAGCT 37526
|||||||| ||||| || ||||| || || || ||||| || || || || | ||
Sbjct 21047201 CTATACATCTCAGAATGGATATTCTCGATTGCGATCTGGAAGCCGTAGAATGCACGCGCC 21047260
Query 37527 TCAGATAATTGAACATCGTTAAAAAACCTCTTAGCTAAGTTTTCATTAACTATCCCATCA 37586
|||| | ||| | || | | ||||| || | ||||||| || || || ||
Sbjct 21047261 TCAGCGACTTGTATCTCTGTCATGAACCTTCCGGCGAGGTTTTCAAGGACGATTCCGTCG 21047320
Query 37587 CTAGCTGCAAAGAAAGCAAGAACATATTTTATAAAATGTCTTTC 37630
||| || |||||||| || | | ||| || || || | |||
Sbjct 21047321 GAAGCGGCGAAGAAAGCGAGGATGTGTTTGATGAAGTGGCGTTC 21047364
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 592216306050920
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |