Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Lupinus_20angustifolius_20[refseq_20GCF_5F001865875.1_202016-11-16]
13,573 sequences; 609,203,021 total letters
Query= NC_018875.1
Length=119082
Score E
Sequences producing significant alignments: (Bits) Value
seq4 100 2e-16
seq19 96.9 3e-15
seq12525 91.5 1e-13
seq5 89.7 4e-13
seq18 86.0 5e-12
seq6 86.0 5e-12
>seq4
Length=27333975
Score = 100 bits (110), Expect = 2e-16
Identities = 138/193 (72%), Gaps = 0/193 (0%)
Strand=Plus/Minus
Query 48575 CTCTTTTTGAATATTGTAATCAGATAGACTTCGATCGTCGTCCAACTGCTTACCGGCAAA 48634
||| || |||||||| ||||||| | | | | | || || || ||||| || |||||
Sbjct 24477809 CTCCTTCTGAATATTATAATCAGCCAAAGTCCTTCCATCTTCTAATTGCTTCCCTGCAAA 24477750
Query 48635 TATCAGTCGCTGTTGATCCGTGGGAACGCCCTCCTTGTCGCTAATCTTTTGTTTTACAGA 48694
|||| | ||| ||||||| |||| || ||||| || |||||| ||| |||
Sbjct 24477749 AATCAACCTCTGCTGATCCGGTGGAATACCTTCCTTATCCTGAATCTTAGCTTTCACATT 24477690
Query 48695 ACCCACAGACTCTGACGCCTCCACCTCCACCGTAATCGTTTTTCCCGTCAAAGTTTTTAC 48754
| | | | || || |||||||||| ||||| ||||| || |||||||| || ||
Sbjct 24477689 ATCAATTGTATCAGAACTTTCCACCTCCAAAGTAATGGTTTTCCCAGTCAAAGTCTTCAC 24477630
Query 48755 AAAAATCTGCATC 48767
|||||||||||||
Sbjct 24477629 AAAAATCTGCATC 24477617
>seq19
Length=18159812
Score = 96.9 bits (106), Expect = 3e-15
Identities = 152/218 (70%), Gaps = 0/218 (0%)
Strand=Plus/Minus
Query 48549 AGCCGCAACACCAAATGTAGCGTGCTCTCTTTTTGAATATTGTAATCAGATAGACTTCGA 48608
|| ||||| || | ||| || ||| ||| || || || || ||||||| | | |||||
Sbjct 4941563 AGACGCAAGACAAGATGGAGGGTGGACTCCTTCTGGATGTTATAATCAGCCAAAGTTCGA 4941504
Query 48609 TCGTCGTCCAACTGCTTACCGGCAAATATCAGTCGCTGTTGATCCGTGGGAACGCCCTCC 48668
| || || | |||||| || ||||| || || | ||| ||||| | |||| ||||||
Sbjct 4941503 CCATCCTCAAGCTGCTTGCCAGCAAAGATAAGCCTCTGCTGATCTGGTGGAATACCCTCC 4941444
Query 48669 TTGTCGCTAATCTTTTGTTTTACAGAACCCACAGACTCTGACGCCTCCACCTCCACCGTA 48728
||||| |||||| ||| ||| | | | || || ||||||||| | ||
Sbjct 4941443 TTGTCTTGGATCTTTGCTTTGACATTGTCGATGGTGTCAGAACTCTCCACCTCAAGGGTG 4941384
Query 48729 ATCGTTTTTCCCGTCAAAGTTTTTACAAAAATCTGCAT 48766
|| || ||||| ||||| || || ||||| || |||||
Sbjct 4941383 ATTGTCTTTCCAGTCAAGGTCTTCACAAAGATTTGCAT 4941346
Score = 93.3 bits (102), Expect = 3e-14
Identities = 101/134 (75%), Gaps = 0/134 (0%)
Strand=Plus/Plus
Query 48540 CCGCCCCTTAGCCGCAACACCAAATGTAGCGTGCTCTCTTTTTGAATATTGTAATCAGAT 48599
|| ||||| |||| ||| ||||| || ||||| || || || ||||| |||||||
Sbjct 605670 CCACCCCTAAGCCTCAAAACCAAGTGAAGCGTTGATTCCTTCTGTATATTATAATCAGCA 605729
Query 48600 AGACTTCGATCGTCGTCCAACTGCTTACCGGCAAATATCAGTCGCTGTTGATCCGTGGGA 48659
||| | || | || |||||||||||||| ||||| |||| | ||| || |||| |||
Sbjct 605730 AGAGTGCGTCCATCTTCCAACTGCTTACCAGCAAAAATCAACCTCTGCTGGTCCGGGGGG 605789
Query 48660 ACGCCCTCCTTGTC 48673
| |||||||||||
Sbjct 605790 ATACCCTCCTTGTC 605803
Score = 91.5 bits (100), Expect = 1e-13
Identities = 153/219 (70%), Gaps = 2/219 (1%)
Strand=Plus/Minus
Query 48549 AGCCGCAACACCAAATGTAGCGTGCTCTCTTTTTGAATATTGTAATCAGATAGACTTCGA 48608
|| |||||||| | || || || || || ||||| ||||| |||| || | |
Sbjct 4942019 AGACGCAACACAAGGTGAAGAGTAGATTCCTTCTGAATGTTGTAGTCAGCAAGGGTCCTT 4941960
Query 48609 TCGTCGTCCAACTGCTTACCGGCAAATATCAGTCGCTGTTGATCCG-TGGGAACGCCCTC 48667
| || ||||||||||| |||||||| |||| | ||| || || | ||||| | |||||
Sbjct 4941959 CCATCCTCCAACTGCTTCCCGGCAAAGATCAACCTCTGCTGGTCAGGTGGGATC-CCCTC 4941901
Query 48668 CTTGTCGCTAATCTTTTGTTTTACAGAACCCACAGACTCTGACGCCTCCACCTCCACCGT 48727
|||||| || ||| || ||| | | | | || || ||||||||||| ||
Sbjct 4941900 CTTGTCCTGGATTTTTGCCTTCACATTATCGATGGTGTCCGAACTCTCCACCTCCAATGT 4941841
Query 48728 AATCGTTTTTCCCGTCAAAGTTTTTACAAAAATCTGCAT 48766
||| || || || |||| ||| || ||||| ||||||||
Sbjct 4941840 AATAGTCTTCCCAGTCAGAGTCTTCACAAAGATCTGCAT 4941802
Score = 87.8 bits (96), Expect = 1e-12
Identities = 150/218 (69%), Gaps = 0/218 (0%)
Strand=Plus/Minus
Query 48549 AGCCGCAACACCAAATGTAGCGTGCTCTCTTTTTGAATATTGTAATCAGATAGACTTCGA 48608
|| ||||| || | || || ||| ||| || || || || ||||| | | | |||||
Sbjct 4941107 AGACGCAAGACAAGGTGAAGAGTGGACTCCTTCTGGATGTTATAATCGGCCAAAGTTCGA 4941048
Query 48609 TCGTCGTCCAACTGCTTACCGGCAAATATCAGTCGCTGTTGATCCGTGGGAACGCCCTCC 48668
|||| || | |||||| || ||||| || || | ||| ||||| | || | ||||||
Sbjct 4941047 CCGTCCTCAAGCTGCTTGCCAGCAAAGATAAGCCTCTGCTGATCGGGTGGGATACCCTCC 4940988
Query 48669 TTGTCGCTAATCTTTTGTTTTACAGAACCCACAGACTCTGACGCCTCCACCTCCACCGTA 48728
||||| |||||| ||| ||| | | | || || ||||||||| | ||
Sbjct 4940987 TTGTCTTGGATCTTTGCTTTGACATTGTCAATGGTGTCGGAACTCTCCACCTCAAGGGTG 4940928
Query 48729 ATCGTTTTTCCCGTCAAAGTTTTTACAAAAATCTGCAT 48766
|| || ||||| ||||| || || ||||| || |||||
Sbjct 4940927 ATGGTCTTTCCGGTCAAGGTCTTAACAAAGATTTGCAT 4940890
>seq12525
Length=279716
Score = 91.5 bits (100), Expect = 1e-13
Identities = 151/218 (69%), Gaps = 0/218 (0%)
Strand=Plus/Minus
Query 48549 AGCCGCAACACCAAATGTAGCGTGCTCTCTTTTTGAATATTGTAATCAGATAGACTTCGA 48608
|| |||| ||| | || || ||| ||| || ||||| ||||| |||| || | |
Sbjct 230694 AGACGCAGCACAAGGTGAAGGGTGGACTCCTTCTGAATGTTGTAGTCAGCAAGGGTCCTT 230635
Query 48609 TCGTCGTCCAACTGCTTACCGGCAAATATCAGTCGCTGTTGATCCGTGGGAACGCCCTCC 48668
| || || | |||||| || ||||| |||| | |||||| || | ||| | || |||
Sbjct 230634 CCATCTTCAAGCTGCTTTCCAGCAAAGATCAACCTCTGTTGGTCTGGGGGGATTCCTTCC 230575
Query 48669 TTGTCGCTAATCTTTTGTTTTACAGAACCCACAGACTCTGACGCCTCCACCTCCACCGTA 48728
|| || ||||||| || ||| | | | || || || ||| ||||| | |||
Sbjct 230574 TTATCCTGAATCTTTGCCTTCACATTATCAATAGTATCCGAACTCTCAACCTCAAGAGTA 230515
Query 48729 ATCGTTTTTCCCGTCAAAGTTTTTACAAAAATCTGCAT 48766
|| ||||| || ||||| || || ||||||||||||||
Sbjct 230514 ATAGTTTTCCCAGTCAAGGTCTTCACAAAAATCTGCAT 230477
>seq5
Length=26376911
Score = 89.7 bits (98), Expect = 4e-13
Identities = 104/139 (75%), Gaps = 1/139 (1%)
Strand=Plus/Plus
Query 48540 CCGCCCCTTAGCCGCAACACCAAATGTAGCGTGCTCTCTTTTTGAATATTGTAATCAGAT 48599
|| ||||| |||| ||| ||||| || || ||| || ||||| |||||||||||||
Sbjct 20170923 CCTCCCCTAAGCCTCAAGACCAAGTGAAGTGTGGATTCCTTTTGTATATTGTAATCAGCA 20170982
Query 48600 AGACTTCGATCGTCGTCCAACTGCTTACCGGCAAATATCAGTCGCTGTTGATCCGTGGGA 48659
||| | || | || |||| ||||||||| ||||| |||| | ||| || || | ||
Sbjct 20170983 AGAGTGCGGCCATCTTCCAGCTGCTTACCAGCAAAAATCAACCTCTGCTGGTCAGGAGGG 20171042
Query 48660 ACGCCCTCCTTGTCGCTAA 48678
| ||||||||||| ||||
Sbjct 20171043 ATACCCTCCTTGTC-CTAA 20171060
Score = 82.4 bits (90), Expect = 6e-11
Identities = 142/204 (70%), Gaps = 2/204 (1%)
Strand=Plus/Plus
Query 48564 TGTAGCGTGCTCTCTTTTTGAATATTGTAATCAGATAGACTTCGATCGTCGTCCAACTGC 48623
|| || ||| ||| |||||||| ||||| |||| || | | | || |||||||||
Sbjct 2893492 TGAAGAGTGGACTCCTTTTGAATGTTGTAGTCAGCAAGGGTCCTTCCATCCTCCAACTGC 2893551
Query 48624 TTACCGGCAAATATCAGTCGCTGTTGATCC-GTGGGAACGCCCTCCTTGTCGCTAATCTT 48682
|| || ||||| |||| | ||| || ||| |||||| | ||||||||||| || ||
Sbjct 2893552 TTCCCAGCAAAGATCAACCTCTGCTGGTCCGGTGGGATC-CCCTCCTTGTCCTGGATTTT 2893610
Query 48683 TTGTTTTACAGAACCCACAGACTCTGACGCCTCCACCTCCACCGTAATCGTTTTTCCCGT 48742
| ||| ||| | | | || || || ||||||| || || || || || ||
Sbjct 2893611 TGCTTTCACATTGTCGATTGTGTCCGAACTTTCAACCTCCAAAGTGATGGTCTTACCGGT 2893670
Query 48743 CAAAGTTTTTACAAAAATCTGCAT 48766
|||||| || ||||| || |||||
Sbjct 2893671 CAAAGTCTTCACAAAGATTTGCAT 2893694
>seq18
Length=16588007
Score = 86.0 bits (94), Expect = 5e-12
Identities = 136/195 (70%), Gaps = 0/195 (0%)
Strand=Plus/Plus
Query 48575 CTCTTTTTGAATATTGTAATCAGATAGACTTCGATCGTCGTCCAACTGCTTACCGGCAAA 48634
||| || |||||||||||||| | ||| | ||| |||| || | || || ||||| ||
Sbjct 12189702 CTCCTTCTGAATATTGTAATCGGCGAGAGTGCGACCGTCTTCGAGTTGTTTTCCGGCGAA 12189761
Query 48635 TATCAGTCGCTGTTGATCCGTGGGAACGCCCTCCTTGTCGCTAATCTTTTGTTTTACAGA 48694
|||| ||||| || |||| |||| || |||||||| ||||| || |||
Sbjct 12189762 GATCAAACGCTGCTGGTCCGGTGGAATTCCTTCCTTGTCTTGGATCTTGGCCTTGACATT 12189821
Query 48695 ACCCACAGACTCTGACGCCTCCACCTCCACCGTAATCGTTTTTCCCGTCAAAGTTTTTAC 48754
| | | || || | || ||||| | ||||| ||||| ||||| | ||||| ||
Sbjct 12189822 GTCGATGGTATCGGAGGATTCAACCTCGAGGGTAATGGTTTTACCCGTTAGGGTTTTCAC 12189881
Query 48755 AAAAATCTGCATCGT 48769
|| |||||||||||
Sbjct 12189882 GAAGATCTGCATCGT 12189896
>seq6
Length=33111450
Score = 86.0 bits (94), Expect = 5e-12
Identities = 134/192 (70%), Gaps = 0/192 (0%)
Strand=Plus/Minus
Query 48575 CTCTTTTTGAATATTGTAATCAGATAGACTTCGATCGTCGTCCAACTGCTTACCGGCAAA 48634
||| || ||||| || || |||| ||| | | | || |||||||| || || || ||
Sbjct 6669297 CTCCTTCTGAATGTTATAGTCAGCAAGAGTCCTTCCATCTTCCAACTGTTTCCCAGCGAA 6669238
Query 48635 TATCAGTCGCTGTTGATCCGTGGGAACGCCCTCCTTGTCGCTAATCTTTTGTTTTACAGA 48694
|||| | ||||||||| | |||| ||||||||||| || ||| || |||
Sbjct 6669237 GATCAACCTCTGTTGATCTGGTGGAATCCCCTCCTTGTCTTGTATTTTTGCCTTCACATT 6669178
Query 48695 ACCCACAGACTCTGACGCCTCCACCTCCACCGTAATCGTTTTTCCCGTCAAAGTTTTTAC 48754
| | | | || || ||||||||||| ||||| || || || |||| ||| || ||
Sbjct 6669177 ATCAATCGTGTCAGAACTCTCCACCTCCAATGTAATAGTCTTCCCAGTCAGAGTCTTCAC 6669118
Query 48755 AAAAATCTGCAT 48766
||| ||||||||
Sbjct 6669117 AAATATCTGCAT 6669106
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 380874584945079
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |