Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Lupinus_20angustifolius_20[refseq_20GCF_5F001865875.1_202016-11-16]
13,573 sequences; 609,203,021 total letters
Query= NC_019491.1
Length=291144
Score E
Sequences producing significant alignments: (Bits) Value
seq2 136 7e-27
seq9 113 8e-20
seq11 91.5 3e-13
>seq2
Length=24697652
Score = 136 bits (150), Expect = 7e-27
Identities = 424/650 (65%), Gaps = 16/650 (2%)
Strand=Plus/Plus
Query 48040 AAACTCCTTCTCTATCTGCACGGCTTCCCCCACAATCTGCTTAACGCGGGACTCTGAGGG 48099
||||||| ||||||| | || || || | ||||||| ||| ||||| |||| |
Sbjct 21046825 AAACTCCCTCTCTATTTCAACCGCATCACGCACAATCCCCTTCACGCGCTCTTCTGGAAG 21046884
Query 48100 TTTGTTGCGCAGGTGCTTGGCATAGAGCATGCAGGCAAAGTCCCTGTGCAAGCCTTCGTC 48159
|| || || | | || | || ||| || || || | ||| || || || ||
Sbjct 21046885 CTTCTTATTCATTAGAGAG---TACAACAAGCACGCGAAATCACAGTGTAAACCCTCATC 21046941
Query 48160 CCGGCTGATGAGCACGTTGGAGAAGCAGAGACCAGGCATGACCCCCCTCTGTTTGAGCCA 48219
|| ||| | | |||| |||||| ||||||||||| | || | | || | |||
Sbjct 21046942 TCGCGAGATTAACTCGTTTGAGAAGGTAAGACCAGGCATAAGGCCTCGTTTCTTCAACCA 21047001
Query 48220 GAAAATTGCCGCGAAAGAGCCAGAGAAGAAGATGCCCTCCACTGCCGCGAACGCGGTGAG 48279
|| || || ||| ||||||||||| || || || || || ||||| |||
Sbjct 21047002 AAATATCGCACAGAAGCTTCCAGAGAAGAAAATACCTTCAACACAAGCAAACGCAACGAG 21047061
Query 48280 CCTCTCTCCGAAAGAAGCGTTCTTGTCTGA-GATCCAGGAAAGCGCCCAGTCTGCCTTCT 48338
| || |||| || |||| | | |||||| ||||||||| || || || |
Sbjct 21047062 ACGTTCAGCGAAGGA----TTCTGAACCGTCGATCCAACGAAGCGCCCACTCAGCTTTTT 21047117
Query 48339 TCTTGATGCATGGCATCGTCTCTATGGCCCGGAAGA---GCTTCTTGCACTCACCTGCGT 48395
| | ||| || ||||||||||| || |||| | | || || ||| | | |
Sbjct 21047118 TAGCAACGCAAGGTATCGTCTCTATTGCGTGGAATAATCGATTTTTA---TCAGCGGAAT 21047174
Query 48396 CCGCAACATAGGTAGTGAGCAGCTTTGCGTACATCTCAGAGTGCACATTCTCTATAGCGA 48455
| | ||| || || || ||||||||||| || | |||||| || ||||
Sbjct 21047175 CTTTGATATACGTTTCAAGAAGGAGACTATACATCTCAGAATGGATATTCTCGATTGCGA 21047234
Query 48456 TCTGGAACCCGTAGAAGGCCCTGGCCTCAAACACCTGCACTTCTGTGGAGAATCTCTCCA 48515
||||||| |||||||| || | |||||| || || | ||||| ||| || |||
Sbjct 21047235 TCTGGAAGCCGTAGAATGCACGCGCCTCAGCGACTTGTATCTCTGTCATGAACCT-TCCG 21047293
Query 48516 GC-AGATTCTCATTGACTATCCCATCTGAAGCAGCAAAGAAGGCAAGGACATGTTTAAGG 48574
|| || || ||| ||| || || || ||||| || ||||| || |||| ||||| | |
Sbjct 21047294 GCGAGGTTTTCAAGGACGATTCCGTCGGAAGCGGCGAAGAAAGCGAGGATGTGTTTGATG 21047353
Query 48575 AAATGGCGCTCGTTGTGGGTGAGAGCATTCCAGCCCTGTACGTCTTTGCCCAGGTCCACT 48634
|| ||||| ||| || |||||| | | |||| | | |||| || || |||
Sbjct 21047354 AAGTGGCGTTCGCCGTCGGTGAGGGAGTCCCAGTGGCGGAGATCTTGAGAGAGATCGACT 21047413
Query 48635 TCTTCCACAGTCCAGAAGGACGCGAGTGCTTTTTTGTACATGCCCCATAT 48684
||||| | |||||||| || || ||||||||||||||| |||| ||
Sbjct 21047414 TCTTCGGCGGTCCAGAATGAAGCTTCTGCTTTTTTGTACATTTCCCAGAT 21047463
>seq9
Length=21753712
Score = 113 bits (124), Expect = 8e-20
Identities = 183/261 (70%), Gaps = 2/261 (1%)
Strand=Plus/Plus
Query 48425 TACATCTCAGAGTGCACATTCTCTATAGCGATCTGGAACCCGTAGAAGGCCCTGGCCTCA 48484
|||||||||||||| | ||| || || ||||| ||||| |||||||| || | ||||||
Sbjct 19304211 TACATCTCAGAGTGGATATTTTCAATGGCGATTTGGAAGCCGTAGAAAGCACGCGCCTCA 19304270
Query 48485 AACACCTGCACTTCTGTGGAGAATCTCTCCAGC-AGATTCTCATTGACTATCCCATCTGA 48543
|| || | || || ||| || ||| || || || ||| || || || || ||
Sbjct 19304271 GCGACTTGAATTTGAGTCATGAACCT-TCCGGCGAGGTTTTCAAGAACGATTCCGTCGGA 19304329
Query 48544 AGCAGCAAAGAAGGCAAGGACATGTTTAAGGAAATGGCGCTCGTTGTGGGTGAGAGCATT 48603
|| || |||||||| |||| ||||| | ||| ||||| || | || |||||||| ||
Sbjct 19304330 GGCGGCGAAGAAGGCGAGGATGTGTTTGATGAAGTGGCGTTCATCGTCGGTGAGAGAATC 19304389
Query 48604 CCAGCCCTGTACGTCTTTGCCCAGGTCCACTTCTTCCACAGTCCAGAAGGACGCGAGTGC 48663
||| | | |||| || || |||||||| | |||||||| || || ||
Sbjct 19304390 CCAATGGCGAAGATCTTGAGAAAGATCGACTTCTTCGGCGGTCCAGAATGAAGCTTCGGC 19304449
Query 48664 TTTTTTGTACATGCCCCATAT 48684
||| |||||||| |||| ||
Sbjct 19304450 TTTCTTGTACATTTCCCAGAT 19304470
>seq11
Length=35963958
Score = 91.5 bits (100), Expect = 3e-13
Identities = 179/262 (68%), Gaps = 2/262 (1%)
Strand=Plus/Minus
Query 48424 GTACATCTCAGAGTGCACATTCTCTATAGCGATCTGGAACCCGTAGAAGGCCCTGGCCTC 48483
|||||||||||| || | ||| || ||||| || ||||| |||||||| || | |||||
Sbjct 2850443 GTACATCTCAGAATGGATATTTTCAATAGCAATTTGGAATCCGTAGAAAGCACGCGCCTC 2850384
Query 48484 AAACACCTGCACTTCTGTGGAGAATCTCTCCAGC-AGATTCTCATTGACTATCCCATCTG 48542
| || || | ||| || | || | ||| || || || ||| || || || || |
Sbjct 2850383 AGCGACTTGGATTTCAGT-CATAAACCTTCCGGCAAGGTTTTCAAGAACGATACCGTCAG 2850325
Query 48543 AAGCAGCAAAGAAGGCAAGGACATGTTTAAGGAAATGGCGCTCGTTGTGGGTGAGAGCAT 48602
| || || ||||| || ||||| ||||| | || ||||| ||| || |||||| |
Sbjct 2850324 AGGCGGCGAAGAAAGCGAGGACGTGTTTGACAAAGTGGCGTTCGCCGTCGGTGAGGTTCT 2850265
Query 48603 TCCAGCCCTGTACGTCTTTGCCCAGGTCCACTTCTTCCACAGTCCAGAAGGACGCGAGTG 48662
|||| | ||||| | || || ||||| || | |||||||| || || |
Sbjct 2850264 CCCAGTGGCGGACGTCCTGAGAAAGATCAACTTCCTCGGCGGTCCAGAAAGATGCTTCGG 2850205
Query 48663 CTTTTTTGTACATGCCCCATAT 48684
|||| || ||||| |||| ||
Sbjct 2850204 CTTTCTTATACATCTCCCAGAT 2850183
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 931374753816320
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |