Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lupinus_20angustifolius_20[refseq_20GCF_5F001865875.1_202016-11-16] 13,573 sequences; 609,203,021 total letters Query= NC_019491.1 Length=291144 Score E Sequences producing significant alignments: (Bits) Value seq2 136 7e-27 seq9 113 8e-20 seq11 91.5 3e-13 >seq2 Length=24697652 Score = 136 bits (150), Expect = 7e-27 Identities = 424/650 (65%), Gaps = 16/650 (2%) Strand=Plus/Plus Query 48040 AAACTCCTTCTCTATCTGCACGGCTTCCCCCACAATCTGCTTAACGCGGGACTCTGAGGG 48099 ||||||| ||||||| | || || || | ||||||| ||| ||||| |||| | Sbjct 21046825 AAACTCCCTCTCTATTTCAACCGCATCACGCACAATCCCCTTCACGCGCTCTTCTGGAAG 21046884 Query 48100 TTTGTTGCGCAGGTGCTTGGCATAGAGCATGCAGGCAAAGTCCCTGTGCAAGCCTTCGTC 48159 || || || | | || | || ||| || || || | ||| || || || || Sbjct 21046885 CTTCTTATTCATTAGAGAG---TACAACAAGCACGCGAAATCACAGTGTAAACCCTCATC 21046941 Query 48160 CCGGCTGATGAGCACGTTGGAGAAGCAGAGACCAGGCATGACCCCCCTCTGTTTGAGCCA 48219 || ||| | | |||| |||||| ||||||||||| | || | | || | ||| Sbjct 21046942 TCGCGAGATTAACTCGTTTGAGAAGGTAAGACCAGGCATAAGGCCTCGTTTCTTCAACCA 21047001 Query 48220 GAAAATTGCCGCGAAAGAGCCAGAGAAGAAGATGCCCTCCACTGCCGCGAACGCGGTGAG 48279 || || || ||| ||||||||||| || || || || || ||||| ||| Sbjct 21047002 AAATATCGCACAGAAGCTTCCAGAGAAGAAAATACCTTCAACACAAGCAAACGCAACGAG 21047061 Query 48280 CCTCTCTCCGAAAGAAGCGTTCTTGTCTGA-GATCCAGGAAAGCGCCCAGTCTGCCTTCT 48338 | || |||| || |||| | | |||||| ||||||||| || || || | Sbjct 21047062 ACGTTCAGCGAAGGA----TTCTGAACCGTCGATCCAACGAAGCGCCCACTCAGCTTTTT 21047117 Query 48339 TCTTGATGCATGGCATCGTCTCTATGGCCCGGAAGA---GCTTCTTGCACTCACCTGCGT 48395 | | ||| || ||||||||||| || |||| | | || || ||| | | | Sbjct 21047118 TAGCAACGCAAGGTATCGTCTCTATTGCGTGGAATAATCGATTTTTA---TCAGCGGAAT 21047174 Query 48396 CCGCAACATAGGTAGTGAGCAGCTTTGCGTACATCTCAGAGTGCACATTCTCTATAGCGA 48455 | | ||| || || || ||||||||||| || | |||||| || |||| Sbjct 21047175 CTTTGATATACGTTTCAAGAAGGAGACTATACATCTCAGAATGGATATTCTCGATTGCGA 21047234 Query 48456 TCTGGAACCCGTAGAAGGCCCTGGCCTCAAACACCTGCACTTCTGTGGAGAATCTCTCCA 48515 ||||||| |||||||| || | |||||| || || | ||||| ||| || ||| Sbjct 21047235 TCTGGAAGCCGTAGAATGCACGCGCCTCAGCGACTTGTATCTCTGTCATGAACCT-TCCG 21047293 Query 48516 GC-AGATTCTCATTGACTATCCCATCTGAAGCAGCAAAGAAGGCAAGGACATGTTTAAGG 48574 || || || ||| ||| || || || ||||| || ||||| || |||| ||||| | | Sbjct 21047294 GCGAGGTTTTCAAGGACGATTCCGTCGGAAGCGGCGAAGAAAGCGAGGATGTGTTTGATG 21047353 Query 48575 AAATGGCGCTCGTTGTGGGTGAGAGCATTCCAGCCCTGTACGTCTTTGCCCAGGTCCACT 48634 || ||||| ||| || |||||| | | |||| | | |||| || || ||| Sbjct 21047354 AAGTGGCGTTCGCCGTCGGTGAGGGAGTCCCAGTGGCGGAGATCTTGAGAGAGATCGACT 21047413 Query 48635 TCTTCCACAGTCCAGAAGGACGCGAGTGCTTTTTTGTACATGCCCCATAT 48684 ||||| | |||||||| || || ||||||||||||||| |||| || Sbjct 21047414 TCTTCGGCGGTCCAGAATGAAGCTTCTGCTTTTTTGTACATTTCCCAGAT 21047463 >seq9 Length=21753712 Score = 113 bits (124), Expect = 8e-20 Identities = 183/261 (70%), Gaps = 2/261 (1%) Strand=Plus/Plus Query 48425 TACATCTCAGAGTGCACATTCTCTATAGCGATCTGGAACCCGTAGAAGGCCCTGGCCTCA 48484 |||||||||||||| | ||| || || ||||| ||||| |||||||| || | |||||| Sbjct 19304211 TACATCTCAGAGTGGATATTTTCAATGGCGATTTGGAAGCCGTAGAAAGCACGCGCCTCA 19304270 Query 48485 AACACCTGCACTTCTGTGGAGAATCTCTCCAGC-AGATTCTCATTGACTATCCCATCTGA 48543 || || | || || ||| || ||| || || || ||| || || || || || Sbjct 19304271 GCGACTTGAATTTGAGTCATGAACCT-TCCGGCGAGGTTTTCAAGAACGATTCCGTCGGA 19304329 Query 48544 AGCAGCAAAGAAGGCAAGGACATGTTTAAGGAAATGGCGCTCGTTGTGGGTGAGAGCATT 48603 || || |||||||| |||| ||||| | ||| ||||| || | || |||||||| || Sbjct 19304330 GGCGGCGAAGAAGGCGAGGATGTGTTTGATGAAGTGGCGTTCATCGTCGGTGAGAGAATC 19304389 Query 48604 CCAGCCCTGTACGTCTTTGCCCAGGTCCACTTCTTCCACAGTCCAGAAGGACGCGAGTGC 48663 ||| | | |||| || || |||||||| | |||||||| || || || Sbjct 19304390 CCAATGGCGAAGATCTTGAGAAAGATCGACTTCTTCGGCGGTCCAGAATGAAGCTTCGGC 19304449 Query 48664 TTTTTTGTACATGCCCCATAT 48684 ||| |||||||| |||| || Sbjct 19304450 TTTCTTGTACATTTCCCAGAT 19304470 >seq11 Length=35963958 Score = 91.5 bits (100), Expect = 3e-13 Identities = 179/262 (68%), Gaps = 2/262 (1%) Strand=Plus/Minus Query 48424 GTACATCTCAGAGTGCACATTCTCTATAGCGATCTGGAACCCGTAGAAGGCCCTGGCCTC 48483 |||||||||||| || | ||| || ||||| || ||||| |||||||| || | ||||| Sbjct 2850443 GTACATCTCAGAATGGATATTTTCAATAGCAATTTGGAATCCGTAGAAAGCACGCGCCTC 2850384 Query 48484 AAACACCTGCACTTCTGTGGAGAATCTCTCCAGC-AGATTCTCATTGACTATCCCATCTG 48542 | || || | ||| || | || | ||| || || || ||| || || || || | Sbjct 2850383 AGCGACTTGGATTTCAGT-CATAAACCTTCCGGCAAGGTTTTCAAGAACGATACCGTCAG 2850325 Query 48543 AAGCAGCAAAGAAGGCAAGGACATGTTTAAGGAAATGGCGCTCGTTGTGGGTGAGAGCAT 48602 | || || ||||| || ||||| ||||| | || ||||| ||| || |||||| | Sbjct 2850324 AGGCGGCGAAGAAAGCGAGGACGTGTTTGACAAAGTGGCGTTCGCCGTCGGTGAGGTTCT 2850265 Query 48603 TCCAGCCCTGTACGTCTTTGCCCAGGTCCACTTCTTCCACAGTCCAGAAGGACGCGAGTG 48662 |||| | ||||| | || || ||||| || | |||||||| || || | Sbjct 2850264 CCCAGTGGCGGACGTCCTGAGAAAGATCAACTTCCTCGGCGGTCCAGAAAGATGCTTCGG 2850205 Query 48663 CTTTTTTGTACATGCCCCATAT 48684 |||| || ||||| |||| || Sbjct 2850204 CTTTCTTATACATCTCCCAGAT 2850183 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 931374753816320