Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lupinus_20angustifolius_20[refseq_20GCF_5F001865875.1_202016-11-16] 13,573 sequences; 609,203,021 total letters Query= NC_019945.1 Length=132978 Score E Sequences producing significant alignments: (Bits) Value seq6 105 6e-18 seq19 95.1 1e-14 >seq6 Length=33111450 Score = 105 bits (116), Expect = 6e-18 Identities = 157/223 (70%), Gaps = 0/223 (0%) Strand=Plus/Plus Query 28541 TGATTGTGTAAAAATGCAAATATTTGTAAAAACATTAACGGGTAAAACCATTACCGCCGA 28600 || |||| | | |||||||| ||||| ||||| |||| || || ||||| ||| || Sbjct 6668865 TGTTTGTATGCAGATGCAAATCTTTGTGAAAACCCTAACTGGCAAGACCATCACCCTTGA 6668924 Query 28601 AACGGAACCTTCAGAGACGGTGGCCGATCTCAAGCAAAAAATCGCCGACAAAGAGGGAGT 28660 |||| ||| || || | | | || | ||| || ||| || || ||||| | Sbjct 6668925 GGTGGAAAGTTCTGACACCATTGACAATGTTAAGGCCAAGATCCAAGATAAGGAGGGTAT 6668984 Query 28661 GCCCGTAGATCAACAGAGACTTATCTTTGCGGGCAAACAATTGGAAGATTCTAAAACTAT 28720 || |||||||||||| ||||| ||||| || || ||| | |||||| | ||| | Sbjct 6668985 TCCACCAGATCAACAGAGGCTTATATTTGCTGGAAAGCAACTTGAAGATGGAAGGACTTT 6669044 Query 28721 GGCCGATTATAACATTCAAAAAGAATCTACTCTGCACATGGTA 28763 ||| ||||||||||| || || || |||||||| || ||||| Sbjct 6669045 GGCAGATTATAACATCCAGAAGGAGTCTACTCTTCATTTGGTA 6669087 Score = 89.7 bits (98), Expect = 4e-13 Identities = 148/214 (69%), Gaps = 0/214 (0%) Strand=Plus/Plus Query 28553 AATGCAAATATTTGTAAAAACATTAACGGGTAAAACCATTACCGCCGAAACGGAACCTTC 28612 |||||| |||||||| || || | || || || || ||||| || ||| ||| Sbjct 6669105 AATGCAGATATTTGTGAAGACTCTGACTGGGAAGACTATTACATTGGAGGTGGAGAGTTC 6669164 Query 28613 AGAGACGGTGGCCGATCTCAAGCAAAAAATCGCCGACAAAGAGGGAGTGCCCGTAGATCA 28672 || ||| | | || | ||| |||||| ||||| ||||| | || |||||| Sbjct 6669165 TGACACGATTGATAATGTGAAGGCAAAAATACAAGACAAGGAGGGGATTCCACCAGATCA 6669224 Query 28673 ACAGAGACTTATCTTTGCGGGCAAACAATTGGAAGATTCTAAAACTATGGCCGATTATAA 28732 |||||| | ||||| || || ||||| ||||||||| | ||| | || || ||||| Sbjct 6669225 ACAGAGGTTGATCTTCGCTGGGAAACAGTTGGAAGATGGAAGGACTCTTGCTGACTATAA 6669284 Query 28733 CATTCAAAAAGAATCTACTCTGCACATGGTATTA 28766 |||||| || || || ||||| ||| | || ||| Sbjct 6669285 CATTCAGAAGGAGTCAACTCTTCACCTTGTCTTA 6669318 >seq19 Length=18159812 Score = 95.1 bits (104), Expect = 1e-14 Identities = 148/212 (70%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 28554 ATGCAAATATTTGTAAAAACATTAACGGGTAAAACCATTACCGCCGAAACGGAACCTTCA 28613 |||||||| ||||| || || || || || || ||||| ||| || ||| ||| Sbjct 4940890 ATGCAAATCTTTGTTAAGACCTTGACCGGAAAGACCATCACCCTTGAGGTGGAGAGTTCC 4940949 Query 28614 GAGACGGTGGCCGATCTCAAGCAAAAAATCGCCGACAAAGAGGGAGTGCCCGTAGATCAA 28673 || || | | | || |||| ||| ||| ||||| ||||| | || ||||| Sbjct 4940950 GACACCATTGACAATGTCAAAGCAAAGATCCAAGACAAGGAGGGTATCCCACCCGATCAG 4941009 Query 28674 CAGAGACTTATCTTTGCGGGCAAACAATTGGAAGATTCTAAAACTATGGCCGATTATAAC 28733 ||||| ||||||||||| ||||| || | || || | |||| |||||||||||||| Sbjct 4941010 CAGAGGCTTATCTTTGCTGGCAAGCAGCTTGAGGACGGTCGAACTTTGGCCGATTATAAC 4941069 Query 28734 ATTCAAAAAGAATCTACTCTGCACATGGTATT 28765 || || || || || ||||| ||| | || || Sbjct 4941070 ATCCAGAAGGAGTCCACTCTTCACCTTGTCTT 4941101 Score = 87.8 bits (96), Expect = 2e-12 Identities = 141/203 (69%), Gaps = 0/203 (0%) Strand=Plus/Plus Query 28554 ATGCAAATATTTGTAAAAACATTAACGGGTAAAACCATTACCGCCGAAACGGAACCTTCA 28613 |||||||| ||||| || || || || || || || || ||| || ||| ||| Sbjct 4941346 ATGCAAATCTTTGTGAAGACCTTGACTGGAAAGACAATCACCCTTGAGGTGGAGAGTTCT 4941405 Query 28614 GAGACGGTGGCCGATCTCAAGCAAAAAATCGCCGACAAAGAGGGAGTGCCCGTAGATCAA 28673 || || | | | || |||| ||| ||| ||||| ||||| | || |||||| Sbjct 4941406 GACACCATCGACAATGTCAAAGCAAAGATCCAAGACAAGGAGGGTATTCCACCAGATCAG 4941465 Query 28674 CAGAGACTTATCTTTGCGGGCAAACAATTGGAAGATTCTAAAACTATGGCCGATTATAAC 28733 ||||| ||||||||||| ||||| || | || ||| | |||| |||| ||||||||| Sbjct 4941466 CAGAGGCTTATCTTTGCTGGCAAGCAGCTTGAGGATGGTCGAACTTTGGCTGATTATAAC 4941525 Query 28734 ATTCAAAAAGAATCTACTCTGCA 28756 || || || || || || || || Sbjct 4941526 ATCCAGAAGGAGTCCACCCTCCA 4941548 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 425334429139167