Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lupinus_20angustifolius_20[refseq_20GCF_5F001865875.1_202016-11-16] 13,573 sequences; 609,203,021 total letters Query= NC_020835.1 Length=47325 Score E Sequences producing significant alignments: (Bits) Value seq664 560 3e-155 seq5 181 3e-41 seq19 167 7e-37 seq3 154 4e-33 seq1 143 8e-30 seq8 138 3e-28 seq9 100 9e-17 seq17 93.3 1e-14 seq3662 80.6 8e-11 >seq664 Length=18451 Score = 560 bits (620), Expect = 3e-155 Identities = 719/986 (73%), Gaps = 4/986 (0%) Strand=Plus/Plus Query 17834 AGCTAAATCTAGCGGGAAGTTATGAGCATTACGCTCGTGCATAACTTCAAAGCCAAGGTT 17893 ||||| ||||| |||||||||||||||||||| || ||||||||||| | |||||||| Sbjct 523 AGCTAGGTCTAGAGGGAAGTTATGAGCATTACGTTCATGCATAACTTCCATACCAAGGTT 582 Query 17894 AGCTCTGTTGAGTACGTCAGCCCATGTAGGTACGACTTGTCCTCCAGCTGCTACAATGGA 17953 ||||| ||| | | |||||||| ||| | || | ||| | | || | ||| Sbjct 583 AGCTCGGTTAATAATATCAGCCCAGGTATTAATTACACGACCTTGACTATCAACTACGGA 642 Query 17954 TTGGTTGAAGTTGAATCCATTGAGATTAAAAGCCATAGTGGAGATTCCCATAGAGGTAAG 18013 ||||||||| ||||| ||||| | ||| |||||||| || ||| || | | ||||| Sbjct 643 TTGGTTGAAATTGAAACCATTTAAATTGAAAGCCATGGTACTGATACCTAACGCGGTAAA 702 Query 18014 CCATATGCAAGTGACGGGCCAAGCAGCCAAGAAGAAATGTAGACTCCTGCTATTGTTAAA 18073 ||| || | || ||||||||||| | |||||||||| | | ||| || || Sbjct 703 CCAGATACCTACTACAGGCCAAGCAGCTAGAAAGAAATGTAAAGAACGAGAATTATTGAA 762 Query 18074 GCTAGCATACTGGAAGATGAGTCTCCCAAAGTAGCCATGAGCCGCAACAATATTATACGT 18133 |||||||| |||||||| | || ||||| || |||||||| || ||||||||||| || Sbjct 763 ACTAGCATATTGGAAGATCAATCGGCCAAAATAACCATGAGCAGCTACAATATTATAGGT 822 Query 18134 CTCTTCTTCTTGGCCAAATTTATATCCATAGTTCTGAGACTCAAGCTCAGTCGTTTCTCT 18193 ||||| ||||| |||||| | || || | ||| ||| ||| || || ||||| || Sbjct 823 TTCTTCCTCTTGACCAAATCTGTAACCTTCGTTAGCAGATTCATTTTCTGTGGTTTCCCT 882 Query 18194 AATAAGTGAGGAAGTAACAAGACTTCCGTGCATAGCAGCGAATAAAGCTCCACCGAATAC 18253 || | ||||| || | |||||||||||| ||||| | || |||||||| Sbjct 883 GATCAAACTAGAAGTTACCAAGGAACCGTGCATAGCACTGAATAGGGAGCCGCCGAATAC 942 Query 18254 CCCTGCAACACCGAGCATATGGAACGGATGCATAAGGATATTGTGTTCGGCTTGGAATAC 18313 || || || || | ||| || || ||||||||||| |||||||| || || || ||||| Sbjct 943 ACCAGCTACGCCTAACATGTGAAATGGATGCATAAGAATATTGTGCTCAGCCTGAAATAC 1002 Query 18314 GAACATGAAATTGAAAGTACCGCTAATACCAAGAGGCATACCATCAGAGAAACTCCCTTG 18373 | ||| || ||||||||||| || || |||||||||||||| || || || ||||| Sbjct 1003 AATCATAAAGTTGAAAGTACCAGAGATTCCTAGAGGCATACCATCCGAAAAGCTTCCTTG 1062 Query 18374 TCCAAAAGGATAAA-CGAGAAATACTG-AGAAGGCAGCTGCTACTGGTGCGGAATAAGCA 18431 || | ||||||| | ||||| || | || | |||||||| || || || ||||| ||| Sbjct 1063 ACCGATTGGATAAATCAAGAAA-ACAGCAGTA-GCAGCTGCAACAGGAGCTGAATATGCA 1120 Query 18432 ACACAAATCCACGGGCGCATACCTAGTCTATAACTAAGTTCCCATTGTCGTCCCATGTAA 18491 || |||||| ||||||||||| || | | ||||||||||||| | || ||||||||| Sbjct 1121 ACCGCAATCCAAGGGCGCATACCCAGACGAAAACTAAGTTCCCACTCACGACCCATGTAA 1180 Query 18492 GCTGCGATGCCGATGAGAAAGTGGAACACAATGAGTTGATATGGTCCTCCGTTATATAAC 18551 || | || | | ||||| | ||||| |||| ||| || || || || |||||| Sbjct 1181 CAAGCTACACCAAGTAAGAAGTGTAGAACAATTAGTTCATAAGGACCGCCATTGTATAAC 1240 Query 18552 CACTCGTCGAGGGTTGCAGCTTCCCAGATTGGGTAGAAGTGAAGACCGATTGCGTTAGAT 18611 || || || | || ||| |||||||| || ||||| ||||| | |||||| || ||| Sbjct 1241 CATTCATCAACGGATGCCGCTTCCCATATCGGGTAAAAGTGCAAACCGATAGCCGCAGAA 1300 Query 18612 GACGGGACGATTGCCCCTGATATGATGTTGTTTCCATAGAGTAAGGCTCCTGAGACAGGC 18671 | || | || || || || || || |||||||| || |||| | ||| || |||||| Sbjct 1301 GTAGGAATAATAGCACCCGAAATAATATTGTTTCCGTAAAGTAGAGATCCAGAAACAGGC 1360 Query 18672 TCACGAATACCATCTATGTCAACGGGAGGAGCAGCAACAAATGCAATCAAAAATGCTGTA 18731 |||||||||||||| || || || ||||| ||||||| || || || | |||| | | | Sbjct 1361 TCACGAATACCATCAATATCTACTGGAGGGGCAGCAATGAAAGCGATAATAAATACAGAA 1420 Query 18732 GCTGCGGTTAAAAGTGCAGGGATCATAAGTACCCCAAACCACCCCACGTAGAGGCGGTTG 18791 | |||||| || | | ||||||||| | || |||||||| || | ||| || ||||| Sbjct 1421 GTTGCGGTCAATAAGGTAGGGATCATCAAAACACCAAACCATCCGATGTAAAGACGGTTT 1480 Query 18792 TTTGTACTCGTAACCCAGTCACATAA 18817 | || || || | ||||| ||| || Sbjct 1481 TCAGTGCTGGTTATCCAGTTACAGAA 1506 >seq5 Length=26376911 Score = 181 bits (200), Expect = 3e-41 Identities = 249/348 (72%), Gaps = 0/348 (0%) Strand=Plus/Plus Query 18470 TTCCCATTGTCGTCCCATGTAAGCTGCGATGCCGATGAGAAAGTGGAACACAATGAGTTG 18529 |||||| | || ||||||||| || | || | | ||||| | ||||| |||| Sbjct 10577032 TTCCCACTCACGACCCATGTAACAAGCTACACCAAGTAAGAAGTGTAGAACAATTAGTTC 10577091 Query 18530 ATATGGTCCTCCGTTATATAACCACTCGTCGAGGGTTGCAGCTTCCCAGATTGGGTAGAA 18589 ||| || || || || |||||||| || || | || ||| |||||||| || ||||| || Sbjct 10577092 ATAAGGACCGCCATTGTATAACCATTCATCAACGGATGCCGCTTCCCATATCGGGTAAAA 10577151 Query 18590 GTGAAGACCGATTGCGTTAGATGACGGGACGATTGCCCCTGATATGATGTTGTTTCCATA 18649 ||| | |||||| || ||| | || | || || || || || || |||||||| || Sbjct 10577152 GTGCAAACCGATAGCCGCAGAAGTAGGAATAATAGCACCCGAAATAATATTGTTTCCGTA 10577211 Query 18650 GAGTAAGGCTCCTGAGACAGGCTCACGAATACCATCTATGTCAACGGGAGGAGCAGCAAC 18709 |||| | ||| || |||||||||||||||||||| || || || ||| | ||||||| Sbjct 10577212 AAGTAGAGATCCAGAAACAGGCTCACGAATACCATCAATATCTACTGGAAGGGCAGCAAT 10577271 Query 18710 AAATGCAATCAAAAATGCTGTAGCTGCGGTTAAAAGTGCAGGGATCATAAGTACCCCAAA 18769 || || || | |||| | | || |||||| || | | ||||||||| | || ||||| Sbjct 10577272 GAAAGCGATAATAAATACAGAAGTTGCGGTCAATAAGGTAGGGATCATCAAAACACCAAA 10577331 Query 18770 CCACCCCACGTAGAGGCGGTTGTTTGTACTCGTAACCCAGTCACATAA 18817 ||| || | ||| || ||||| | || || | | ||||| ||| || Sbjct 10577332 CCATCCGATGTAAAGACGGTTTTCAGTGCTGATTATCCAGTTACAGAA 10577379 Score = 102 bits (112), Expect = 2e-17 Identities = 118/159 (74%), Gaps = 0/159 (0%) Strand=Plus/Plus Query 17834 AGCTAAATCTAGCGGGAAGTTATGAGCATTACGCTCGTGCATAACTTCAAAGCCAAGGTT 17893 ||||| ||||| |||||||||||||||||| | || ||||||||||| | |||||||| Sbjct 10060245 AGCTAGGTCTAGAGGGAAGTTATGAGCATTATGTTCATGCATAACTTCCATACCAAGGTT 10060304 Query 17894 AGCTCTGTTGAGTACGTCAGCCCATGTAGGTACGACTTGTCCTCCAGCTGCTACAATGGA 17953 ||||| ||| | | || ||| ||| | || | ||| | | || ||||| Sbjct 10060305 AGCTCGGTTAATAATAATAGTCCAGGTATTAATTACACGACCTTGACTATCAACTATGGA 10060364 Query 17954 TTGGTTGAAGTTGAATCCATTGAGATTAAAAGCCATAGT 17992 ||||||||| ||||| ||||| | ||| |||| |||||| Sbjct 10060365 TTGGTTGAAATTGAAACCATTTAAATTGAAAGTCATAGT 10060403 >seq19 Length=18159812 Score = 167 bits (184), Expect = 7e-37 Identities = 208/285 (73%), Gaps = 0/285 (0%) Strand=Plus/Minus Query 17834 AGCTAAATCTAGCGGGAAGTTATGAGCATTACGCTCGTGCATAACTTCAAAGCCAAGGTT 17893 ||||| ||||| |||||||||||||||||||| || ||||||||||| | |||||||| Sbjct 6185719 AGCTAGGTCTAGAGGGAAGTTATGAGCATTACGTTCATGCATAACTTCCATACCAAGGTT 6185660 Query 17894 AGCTCTGTTGAGTACGTCAGCCCATGTAGGTACGACTTGTCCTCCAGCTGCTACAATGGA 17953 ||||| ||| | | |||||||| ||| | || | ||| | | || | ||| Sbjct 6185659 AGCTCGGTTAATAATATCAGCCCAGGTATTAATTACACGACCTTGACTATCAACTACGGA 6185600 Query 17954 TTGGTTGAAGTTGAATCCATTGAGATTAAAAGCCATAGTGGAGATTCCCATAGAGGTAAG 18013 ||||||||| ||||| ||||| | ||| |||||||| || ||| || | | ||||| Sbjct 6185599 TTGGTTGAAATTGAAACCATTTAAATTGAAAGCCATGGTACTGATACCTAACGCGGTAAA 6185540 Query 18014 CCATATGCAAGTGACGGGCCAAGCAGCCAAGAAGAAATGTAGACTCCTGCTATTGTTAAA 18073 ||| || | || ||||||||||| | |||||||||| | | ||| || || Sbjct 6185539 CCAGATACCTACTACAGGCCAAGCAGCTAGAAAGAAATGTAAAGAACGAGAATTATTGAA 6185480 Query 18074 GCTAGCATACTGGAAGATGAGTCTCCCAAAGTAGCCATGAGCCGC 18118 |||||||| |||||||| | || ||||| || |||||||| || Sbjct 6185479 ACTAGCATATTGGAAGATCAATCGGCCAAAATAACCATGAGCAGC 6185435 >seq3 Length=30153019 Score = 154 bits (170), Expect = 4e-33 Identities = 187/255 (73%), Gaps = 0/255 (0%) Strand=Plus/Minus Query 18563 GGTTGCAGCTTCCCAGATTGGGTAGAAGTGAAGACCGATTGCGTTAGATGACGGGACGAT 18622 || ||| |||||||| || ||||| ||||| | |||||| || ||| | || | || Sbjct 19659980 GGATGCCGCTTCCCATATCGGGTAAAAGTGCAAACCGATAGCCGCAGAAGTAGGAATAAT 19659921 Query 18623 TGCCCCTGATATGATGTTGTTTCCATAGAGTAAGGCTCCTGAGACAGGCTCACGAATACC 18682 || || || || || |||||||| || |||| | ||| || ||||||||||||||||| Sbjct 19659920 AGCACCCGAAATAATATTGTTTCCGTAAAGTAGAGATCCAGAAACAGGCTCACGAATACC 19659861 Query 18683 ATCTATGTCAACGGGAGGAGCAGCAACAAATGCAATCAAAAATGCTGTAGCTGCGGTTAA 18742 ||| || || || ||||| ||||||| || || || | |||| | | || |||||| || Sbjct 19659860 ATCAATATCTACTGGAGGGGCAGCAATGAAAGCGATAATAAATACAGAAGTTGCGGTCAA 19659801 Query 18743 AAGTGCAGGGATCATAAGTACCCCAAACCACCCCACGTAGAGGCGGTTGTTTGTACTCGT 18802 | | ||||||||| | || |||||||| || | ||| || ||||| | || || || Sbjct 19659800 TAAGGTAGGGATCATCAAAACACCAAACCATCCGATGTAAAGACGGTTTTCAGTGCTGGT 19659741 Query 18803 AACCCAGTCACATAA 18817 | ||||| ||| || Sbjct 19659740 TATCCAGTTACAGAA 19659726 Score = 84.2 bits (92), Expect = 7e-12 Identities = 67/81 (83%), Gaps = 0/81 (0%) Strand=Plus/Plus Query 17841 TCTAGCGGGAAGTTATGAGCATTACGCTCGTGCATAACTTCAAAGCCAAGGTTAGCTCTG 17900 ||||| |||||||||||||||||||| || ||||||||||| | |||| |||||||| | Sbjct 15965277 TCTAGAGGGAAGTTATGAGCATTACGTTCATGCATAACTTCCATACCAATGTTAGCTCGG 15965336 Query 17901 TTGAGTACGTCAGCCCATGTA 17921 || | | |||||||| ||| Sbjct 15965337 TTAATAATATCAGCCCAAGTA 15965357 >seq1 Length=36457581 Score = 143 bits (158), Expect = 8e-30 Identities = 160/214 (75%), Gaps = 0/214 (0%) Strand=Plus/Minus Query 17841 TCTAGCGGGAAGTTATGAGCATTACGCTCGTGCATAACTTCAAAGCCAAGGTTAGCTCTG 17900 ||||| |||||||||||||||||||| || ||||||||||| | |||||||||||||| | Sbjct 19599586 TCTAGAGGGAAGTTATGAGCATTACGTTCATGCATAACTTCCATGCCAAGGTTAGCTCGG 19599527 Query 17901 TTGAGTACGTCAGCCCATGTAGGTACGACTTGTCCTCCAGCTGCTACAATGGATTGGTTG 17960 || | | ||||||||| || | || | ||| | | || |||||||||||| Sbjct 19599526 TTTATAATATCAGCCCATATATTAATTACACGACCTTGACTATCAACTATGGATTGGTTG 19599467 Query 17961 AAGTTGAATCCATTGAGATTAAAAGCCATAGTGGAGATTCCCATAGAGGTAAGCCATATG 18020 || ||||| ||||| | ||| |||||||| || | | || | | ||||| ||| || Sbjct 19599466 AAATTGAAACCATTTAAATTGAAAGCCATGGTACTGGTACCTAACGCGGTAAACCAGATA 19599407 Query 18021 CAAGTGACGGGCCAAGCAGCCAAGAAGAAATGTA 18054 | || ||||||||||| || |||||||||| Sbjct 19599406 CCTACTACAGGCCAAGCAGCTAAAAAGAAATGTA 19599373 >seq8 Length=25521646 Score = 138 bits (152), Expect = 3e-28 Identities = 215/305 (70%), Gaps = 2/305 (1%) Strand=Plus/Minus Query 18407 AGCTGCTACTGGTGCGGAATAAGCAACACAAATCCACGGGCGCATACCTAGTCTATAACT 18466 |||||| || | || ||||| ||||| |||||| ||| ||||||| | | | |||| Sbjct 14924974 AGCTGCAACAAGAGCTGAATATGCAACCGCAATCCAAGGGTGCATACCCAAACGAAAACT 14924915 Query 18467 AAGTTCCCATTGTCGTCCCATGTAAGCTGCGATGCCGATGAGAAAGTGGAACACAATGAG 18526 ||||||||| | || || |||||| || | || | | ||||| | ||||| || Sbjct 14924914 AAGTTCCCACTCGCGACCTATGTAACAAGCTACACCAAGTAAGAAGTGTAGAACAATTAG 14924855 Query 18527 TTGATATGGTCCTCCGTTATATAACCACTCGTCGAGGGTTGCAGCTTCCCAGATTGGGTA 18586 || ||| || || || || |||||||| || || | | ||| ||||||| || | ||| Sbjct 14924854 TTAATAAGGACCGCCATTGTATAACCATTCATCAACGTATGCCACTTCCCATATCGAGTA 14924795 Query 18587 GAAGTGAAGACCGATTGCGTTAGATGACGGGACGATTGCCCCTGATATGATGTTGTTTCC 18646 ||||| ||| || || | | | || | || || || || || || |||||||| Sbjct 14924794 AAAGTGCTAACCTATAGCCGCATAAGTAGGAATAATAGCACCCGAAATAATATTGTTTCC 14924735 Query 18647 ATAGAGTAAGGCTCCTGAGACAGGCTCACGAATACCATCTATGTCAACGGGAGGAGCAGC 18706 || |||| | ||| || | |||||||||||||||||| || || || ||||| | || Sbjct 14924734 GTAAAGTAGAGATCCAGA-AAAGGCTCACGAATACCATCAATATCTACTGGAGG-GGGGC 14924677 Query 18707 AACAA 18711 ||||| Sbjct 14924676 AACAA 14924672 >seq9 Length=21753712 Score = 100 bits (110), Expect = 9e-17 Identities = 178/257 (69%), Gaps = 7/257 (3%) Strand=Plus/Plus Query 17830 TTGAAGCTAAATCTAGCGGGAAGTTATGAGCATTACGCTCGTGCATAACTTCAAAGCCAA 17889 ||| ||||| ||||| ||||||||||||||||||| || || |||||||| | |||| Sbjct 18376384 TTGCAGCTAGGTCTAGATGGAAGTTATGAGCATTACGTTCATGTATAACTTCCATACCAA 18376443 Query 17890 GGTTAGCTCTGTTGAGTACGTCAGCCCATGTAGGTACGACTTGTCCT---CCAGCTGCTA 17946 ||||||||| ||| | | ||||| || || | || | ||| | | | ||| Sbjct 18376444 GGTTAGCTCGGTTAATAATATCAGCTCAGATATTAATTACACGACCTTGACTATCAACTA 18376503 Query 17947 CAATGGATTGGTTGAAGTTGAATCCATTGAGATTAAAAGCCATAGTGGAGATTCCCATAG 18006 || |||||||||| ||||| ||||| | || |||||||| ||| ||| || | | Sbjct 18376504 CA---TATTGGTTGAAATTGAAACCATTTAAGTTGAAAGCCATGGTGCTGATACCTAATG 18376560 Query 18007 AGG-TAAGCCATATGCAAGTGACGGGCCAAGCAGCCAAGAAGAAATGTAGACTCCTGCTA 18065 || ||| ||| || | || |||||| || | | |||||||||| | | | Sbjct 18376561 CGGTTAAACCAGATACCTACTACAGGCCAAACAACTAGAAAGAAATGTAAAGAACAAGAA 18376620 Query 18066 TTGTTAAAGCTAGCATA 18082 || || || |||||||| Sbjct 18376621 TTATTGAAACTAGCATA 18376637 >seq17 Length=21299880 Score = 93.3 bits (102), Expect = 1e-14 Identities = 125/173 (72%), Gaps = 1/173 (1%) Strand=Plus/Plus Query 18065 ATTGTTAAAGCTAGCATACTGGAAGATGAGTCTCCCAAAGTAGCCATGAGCCGCAACAAT 18124 ||| || || ||| |||| |||||||| | || ||||| || |||| ||| || ||||| Sbjct 21194110 ATTATTGAAACTATCATATTGGAAGATCAATCAGCCAAAATAACCATTAGCAGCTACAAT 21194169 Query 18125 ATTATACGTCTCTTCTTCTTGGCCAAATTTATATCCATAGTTCTGAGACTCAAGCTCAGT 18184 |||||| | ||||| ||||| |||||| | || || | ||| | | ||| || || Sbjct 21194170 ATTATAGATTTCTTCCTCTTGACCAAATCTGTAACCTTCGTTAGCAAATTCATTTTCTGT 21194229 Query 18185 CGTTTCTCTAATAAGTGAGGAAGTAACAAGACTTCCGTGCATAGCAGCGAATA 18237 ||||| || || | |||||| ||||| |||||||||||| ||||| Sbjct 21194230 GGTTTCCCTGATCAAACTAGAAGTACCAAGA-AACCGTGCATAGCACTGAATA 21194281 Score = 80.6 bits (88), Expect = 8e-11 Identities = 83/109 (76%), Gaps = 0/109 (0%) Strand=Plus/Minus Query 18225 ATAGCAGCGAATAAAGCTCCACCGAATACCCCTGCAACACCGAGCATATGGAACGGATGC 18284 |||||| ||||| | || |||||||| || || || || | ||| || || |||||| Sbjct 19911066 ATAGCACTGAATAGGGAGCCGCCGAATACACCAGCTACGCCTAACATGTGAAATGGATGC 19911007 Query 18285 ATAAGGATATTGTGTTCGGCTTGGAATACGAACATGAAATTGAAAGTAC 18333 ||||| |||||||| || || || ||||| | ||| || ||||||| || Sbjct 19911006 ATAAGAATATTGTGCTCAGCCTGAAATACAATCATAAAGTTGAAAGCAC 19910958 >seq3662 Length=122019 Score = 80.6 bits (88), Expect = 8e-11 Identities = 113/159 (71%), Gaps = 0/159 (0%) Strand=Plus/Minus Query 17834 AGCTAAATCTAGCGGGAAGTTATGAGCATTACGCTCGTGCATAACTTCAAAGCCAAGGTT 17893 ||||| |||| |||||||||||||||||||| || || |||||||| | |||||||| Sbjct 4689 AGCTAGGTCTAAAGGGAAGTTATGAGCATTACGTTCATGTATAACTTCCATACCAAGGTT 4630 Query 17894 AGCTCTGTTGAGTACGTCAGCCCATGTAGGTACGACTTGTCCTCCAGCTGCTACAATGGA 17953 ||||| | | | | |||| | | ||| | || | ||| | | || | ||| Sbjct 4629 AGCTCAGCTAATAATATCAGTCTAAGTATTAATTACACGACCTTGACAATCAACTACGGA 4570 Query 17954 TTGGTTGAAGTTGAATCCATTGAGATTAAAAGCCATAGT 17992 || ||||| || || ||||| | ||| ||||| ||||| Sbjct 4569 TTAATTGAAATTAAAACCATTTAAATTGAAAGCTATAGT 4531 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 151294010594862