Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lupinus_20angustifolius_20[refseq_20GCF_5F001865875.1_202016-11-16] 13,573 sequences; 609,203,021 total letters Query= NC_020838.1 Length=45728 Score E Sequences producing significant alignments: (Bits) Value seq664 562 9e-156 seq19 228 2e-55 seq1 163 8e-36 seq9 152 2e-32 seq5 129 2e-25 seq11 102 2e-17 seq8 102 2e-17 seq17 98.7 3e-16 seq3 89.7 2e-13 >seq664 Length=18451 Score = 562 bits (622), Expect = 9e-156 Identities = 731/1007 (73%), Gaps = 4/1007 (0%) Strand=Plus/Plus Query 21471 GCAAGGTCAAGCGGGAAGTTGTGTGCGTTCCGCTCATGCATCACCTCAAAGCCAAGGTTG 21530 || ||||| || |||||||| || || || || |||||||| || || | |||||||| Sbjct 524 GCTAGGTCTAGAGGGAAGTTATGAGCATTACGTTCATGCATAACTTCCATACCAAGGTTA 583 Query 21531 GCACGGTTAAGAATGTCAGCCCAGGTGTTGATCACCTGTCCATCAGCAGCTAGCAGAGAT 21590 || ||||||| ||| ||||||||||| || || || | || | | | | | | ||| Sbjct 584 GCTCGGTTAATAATATCAGCCCAGGTATTAATTACACGACCTTGACTATCAACTACGGAT 643 Query 21591 TGGTTAAAGTTGAAACCATTCAAGTTGAAAGCCATGGTAGACACGCCAAGCGCAGCAAAC 21650 ||||| || ||||||||||| || ||||||||||||||| | || | ||| | |||| Sbjct 644 TGGTTGAAATTGAAACCATTTAAATTGAAAGCCATGGTACTGATACCTAACGCGGTAAAC 703 Query 21651 CAAATACCTACAACAGGCCAGGCAGCAAGAAAGAAATGAAGACTACGGGAATTATTAAAG 21710 || |||||||| |||||||| ||||| ||||||||||| | | ||| |||||||| || Sbjct 704 CAGATACCTACTACAGGCCAAGCAGCTAGAAAGAAATGTAAAGAACGAGAATTATTGAAA 763 Query 21711 CTAGCATATTGGAAGATAAGCCGACCAAAATAGCCGTGAGCAGCAACAATATTGTAAGTC 21770 ||||||||||||||||| | || |||||||| || |||||||| |||||||| || || Sbjct 764 CTAGCATATTGGAAGATCAATCGGCCAAAATAACCATGAGCAGCTACAATATTATAGGTT 823 Query 21771 TCTTCCTCTTGACCAAACTTGTAACCATAGTTCTGTGAAACCTCTTCAGTCGTCTCACGA 21830 ||||||||||||||||| ||||||| | ||| || | | ||| || || || | Sbjct 824 TCTTCCTCTTGACCAAATCTGTAACCTTCGTTAGCAGATTCATTTTCTGTGGTTTCCCTG 883 Query 21831 ATGAGTGACGACGTGACCAGGCTACCGTGCATAGCAGAGAACAAACTCCCACCAAATACG 21890 || | || || |||| | ||||||||||||| ||| | || || ||||| Sbjct 884 ATCAAACTAGAAGTTACCAAGGAACCGTGCATAGCACTGAATAGGGAGCCGCCGAATACA 943 Query 21891 CCGGCCACACCCAGCATGTGAAAAGGATGCATAAGAATATTGTGCTCAGCCTGGAACACC 21950 || || || || | ||||||||| ||||||||||||||||||||||||||||| || || Sbjct 944 CCAGCTACGCCTAACATGTGAAATGGATGCATAAGAATATTGTGCTCAGCCTGAAATACA 1003 Query 21951 AGCATGTAGTTGAAGGTGCCGGATATCCCCAAGGGCATAGCATCAGAAAAAGAGCCCTGT 22010 | ||| ||||||| || || || || || | |||||| |||| ||||| || || Sbjct 1004 ATCATAAAGTTGAAAGTACCAGAGATTCCTAGAGGCATACCATCCGAAAAGCTTCCTTGA 1063 Query 22011 CCAAACGGATAAACAAGGAACACAGCAGTCGCAGCGGCGACAGGAGCAGAGTACGCAACA 22070 || | ||||||| | ||| |||||||| ||||| || |||||||| || || ||||| Sbjct 1064 CCGATTGGATAAATCAAGAAAACAGCAGTAGCAGCTGCAACAGGAGCTGAATATGCAACC 1123 Query 22071 AAGATCCAGGGCCTCATCCCTAGTCGATAGCTAAGTTCCCACTCTCGTCCCATGTAAGCA 22130 ||||| || | ||| || || ||| | |||||||||||||| || ||||||||| | Sbjct 1124 GCAATCCAAGGGCGCATACCCAGACGAAAACTAAGTTCCCACTCACGACCCATGTAACAA 1183 Query 22131 AAGACGCCAATGAGGAAGTGGAATACGGTGAGTTGGAATGGACCGCCGTTGTACAGCCAT 22190 || |||| | |||||| | || | |||| | |||||||| ||||| | |||| Sbjct 1184 GCTACACCAAGTAAGAAGTGTAGAACAATTAGTTCATAAGGACCGCCATTGTATAACCAT 1243 Query 22191 TCATCAAGTGTAGCAGCTTCCCAAATTGGGTAGAAGTGTAGTCCGATGGCATTACTGCTC 22250 ||||||| | || |||||||| || ||||| ||||| | ||||| || | | Sbjct 1244 TCATCAACGGATGCCGCTTCCCATATCGGGTAAAAGTGCAAACCGATAGCCGCAGAAGTA 1303 Query 22251 GGAACGACGGCTCCTGATATGATGTTGTTACCATACAACAGGGAGCCAGCGACGGGTTCT 22310 |||| | || || || || || ||||| || || | || || |||| || || || Sbjct 1304 GGAATAATAGCACCCGAAATAATATTGTTTCCGTAAAGTAGAGATCCAGAAACAGGCTCA 1363 Query 22311 CGGATTCCATCGATGTCAACAGGTGGTGCGCCAACAAAGGCGATAATAAAACAAGTTGTA 22370 || || ||||| || || || || || || ||| || ||||||||||| || || Sbjct 1364 CGAATACCATCAATATCTACTGGAGGGGCAGCAATGAAAGCGATAATAAATACAGAAGTT 1423 Query 22371 GCGG-CAAGGAGGCACGGAATCATAAGGACTCCGAACCATCCTACATAAAGACGGTTATT 22429 |||| ||| ||| | || ||||| | || || |||||||| | ||||||||||| | Sbjct 1424 GCGGTCAATAAGGTA-GGGATCATCAAAACACCAAACCATCCGATGTAAAGACGGTTTTC 1482 Query 22430 AGTAGAGGTGACCCAGGAACAAAACTGCTCCC--AGGCATTCTCTCT 22474 ||| ||| | |||| ||| || | ||| |||| ||| |||| Sbjct 1483 AGTGCTGGTTATCCAGTTACAGAAGCGACCCCATAGGCTTTCGCTCT 1529 >seq19 Length=18159812 Score = 228 bits (252), Expect = 2e-55 Identities = 221/284 (78%), Gaps = 0/284 (0%) Strand=Plus/Minus Query 21471 GCAAGGTCAAGCGGGAAGTTGTGTGCGTTCCGCTCATGCATCACCTCAAAGCCAAGGTTG 21530 || ||||| || |||||||| || || || || |||||||| || || | |||||||| Sbjct 6185718 GCTAGGTCTAGAGGGAAGTTATGAGCATTACGTTCATGCATAACTTCCATACCAAGGTTA 6185659 Query 21531 GCACGGTTAAGAATGTCAGCCCAGGTGTTGATCACCTGTCCATCAGCAGCTAGCAGAGAT 21590 || ||||||| ||| ||||||||||| || || || | || | | | | | | ||| Sbjct 6185658 GCTCGGTTAATAATATCAGCCCAGGTATTAATTACACGACCTTGACTATCAACTACGGAT 6185599 Query 21591 TGGTTAAAGTTGAAACCATTCAAGTTGAAAGCCATGGTAGACACGCCAAGCGCAGCAAAC 21650 ||||| || ||||||||||| || ||||||||||||||| | || | ||| | |||| Sbjct 6185598 TGGTTGAAATTGAAACCATTTAAATTGAAAGCCATGGTACTGATACCTAACGCGGTAAAC 6185539 Query 21651 CAAATACCTACAACAGGCCAGGCAGCAAGAAAGAAATGAAGACTACGGGAATTATTAAAG 21710 || |||||||| |||||||| ||||| ||||||||||| | | ||| |||||||| || Sbjct 6185538 CAGATACCTACTACAGGCCAAGCAGCTAGAAAGAAATGTAAAGAACGAGAATTATTGAAA 6185479 Query 21711 CTAGCATATTGGAAGATAAGCCGACCAAAATAGCCGTGAGCAGC 21754 ||||||||||||||||| | || |||||||| || |||||||| Sbjct 6185478 CTAGCATATTGGAAGATCAATCGGCCAAAATAACCATGAGCAGC 6185435 >seq1 Length=36457581 Score = 163 bits (180), Expect = 8e-36 Identities = 183/245 (75%), Gaps = 0/245 (0%) Strand=Plus/Minus Query 21474 AGGTCAAGCGGGAAGTTGTGTGCGTTCCGCTCATGCATCACCTCAAAGCCAAGGTTGGCA 21533 ||||| || |||||||| || || || || |||||||| || || | ||||||||| || Sbjct 19599589 AGGTCTAGAGGGAAGTTATGAGCATTACGTTCATGCATAACTTCCATGCCAAGGTTAGCT 19599530 Query 21534 CGGTTAAGAATGTCAGCCCAGGTGTTGATCACCTGTCCATCAGCAGCTAGCAGAGATTGG 21593 ||||| | ||| |||||||| | || || || | || | | | | | | |||||| Sbjct 19599529 CGGTTTATAATATCAGCCCATATATTAATTACACGACCTTGACTATCAACTATGGATTGG 19599470 Query 21594 TTAAAGTTGAAACCATTCAAGTTGAAAGCCATGGTAGACACGCCAAGCGCAGCAAACCAA 21653 || || ||||||||||| || ||||||||||||||| || | ||| | |||||| Sbjct 19599469 TTGAAATTGAAACCATTTAAATTGAAAGCCATGGTACTGGTACCTAACGCGGTAAACCAG 19599410 Query 21654 ATACCTACAACAGGCCAGGCAGCAAGAAAGAAATGAAGACTACGGGAATTATTAAAGCTA 21713 |||||||| |||||||| ||||| | ||||||||| | | ||| || |||| || ||| Sbjct 19599409 ATACCTACTACAGGCCAAGCAGCTAAAAAGAAATGTAAAGAACGAGACTTATCGAAACTA 19599350 Query 21714 GCATA 21718 ||||| Sbjct 19599349 GCATA 19599345 >seq9 Length=21753712 Score = 152 bits (168), Expect = 2e-32 Identities = 185/251 (74%), Gaps = 1/251 (0%) Strand=Plus/Plus Query 21471 GCAAGGTCAAGCGGGAAGTTGTGTGCGTTCCGCTCATGCATCACCTCAAAGCCAAGGTTG 21530 || ||||| || ||||||| || || || || ||||| || || || | |||||||| Sbjct 18376389 GCTAGGTCTAGATGGAAGTTATGAGCATTACGTTCATGTATAACTTCCATACCAAGGTTA 18376448 Query 21531 GCACGGTTAAGAATGTCAGCCCAGGTGTTGATCACCTGTCCATCAGCAGCTAGCAGAGAT 21590 || ||||||| ||| ||||| ||| | || || || | || | | | | | | | || Sbjct 18376449 GCTCGGTTAATAATATCAGCTCAGATATTAATTACACGACCTTGACTATCAACTACATAT 18376508 Query 21591 TGGTTAAAGTTGAAACCATTCAAGTTGAAAGCCATGGTAGACACGCCAAGCGCAG-CAAA 21649 ||||| || ||||||||||| ||||||||||||||||| | || | || | ||| Sbjct 18376509 TGGTTGAAATTGAAACCATTTAAGTTGAAAGCCATGGTGCTGATACCTAATGCGGTTAAA 18376568 Query 21650 CCAAATACCTACAACAGGCCAGGCAGCAAGAAAGAAATGAAGACTACGGGAATTATTAAA 21709 ||| |||||||| |||||||| || | ||||||||||| | | || |||||||| || Sbjct 18376569 CCAGATACCTACTACAGGCCAAACAACTAGAAAGAAATGTAAAGAACAAGAATTATTGAA 18376628 Query 21710 GCTAGCATATT 21720 |||||||||| Sbjct 18376629 ACTAGCATATT 18376639 >seq5 Length=26376911 Score = 129 bits (142), Expect = 2e-25 Identities = 227/328 (69%), Gaps = 2/328 (1%) Strand=Plus/Plus Query 22106 TTCCCACTCTCGTCCCATGTAAGCAAAGACGCCAATGAGGAAGTGGAATACGGTGAGTTG 22165 ||||||||| || ||||||||| | || |||| | |||||| | || | |||| Sbjct 10577032 TTCCCACTCACGACCCATGTAACAAGCTACACCAAGTAAGAAGTGTAGAACAATTAGTTC 10577091 Query 22166 GAATGGACCGCCGTTGTACAGCCATTCATCAAGTGTAGCAGCTTCCCAAATTGGGTAGAA 22225 | |||||||| ||||| | ||||||||||| | || |||||||| || ||||| || Sbjct 10577092 ATAAGGACCGCCATTGTATAACCATTCATCAACGGATGCCGCTTCCCATATCGGGTAAAA 10577151 Query 22226 GTGTAGTCCGATGGCATTACTGCTCGGAACGACGGCTCCTGATATGATGTTGTTACCATA 22285 ||| | ||||| || | | |||| | || || || || || ||||| || || Sbjct 10577152 GTGCAAACCGATAGCCGCAGAAGTAGGAATAATAGCACCCGAAATAATATTGTTTCCGTA 10577211 Query 22286 CAACAGGGAGCCAGCGACGGGTTCTCGGATTCCATCGATGTCAACAGGTGGTGCGCCAAC 22345 | || || |||| || || || || || ||||| || || || || | || ||| Sbjct 10577212 AAGTAGAGATCCAGAAACAGGCTCACGAATACCATCAATATCTACTGGAAGGGCAGCAAT 10577271 Query 22346 AAAGGCGATAATAAAACAAGTTGTAGCGG-CAAGGAGGCACGGAATCATAAGGACTCCGA 22404 || ||||||||||| || || |||| ||| ||| | || ||||| | || || | Sbjct 10577272 GAAAGCGATAATAAATACAGAAGTTGCGGTCAATAAGGTA-GGGATCATCAAAACACCAA 10577330 Query 22405 ACCATCCTACATAAAGACGGTTATTAGT 22432 ||||||| | ||||||||||| | ||| Sbjct 10577331 ACCATCCGATGTAAAGACGGTTTTCAGT 10577358 Score = 109 bits (120), Expect = 2e-19 Identities = 155/217 (71%), Gaps = 1/217 (0%) Strand=Plus/Plus Query 21471 GCAAGGTCAAGCGGGAAGTTGTGTGCGTTCCGCTCATGCATCACCTCAAAGCCAAGGTTG 21530 || ||||| || |||||||| || || || | |||||||| || || | |||||||| Sbjct 10060246 GCTAGGTCTAGAGGGAAGTTATGAGCATTATGTTCATGCATAACTTCCATACCAAGGTTA 10060305 Query 21531 GCACGGTTAAGAATGTCAGCCCAGGTGTTGATCACCTGTCCATCAGCAGCTAGCAGAGAT 21590 || ||||||| ||| || |||||| || || || | || | | | | | | ||| Sbjct 10060306 GCTCGGTTAATAATAATAGTCCAGGTATTAATTACACGACCTTGACTATCAACTATGGAT 10060365 Query 21591 TGGTTAAAGTTGAAACCATTCAAGTTGAAAGCCATGGTAGACACGCCAAGCGCAGCAAAC 21650 ||||| || ||||||||||| || ||||||| ||| ||| | || | || |||| Sbjct 10060366 TGGTTGAAATTGAAACCATTTAAATTGAAAGTCATAGTACTAATACCTAATGCGATAAAC 10060425 Query 21651 CAAATACCTACAACAGGCCAGGCAGCAAGAAAGAAAT 21687 || | |||||| | ||| || ||||| ||||| |||| Sbjct 10060426 CAGACACCTACTATAGG-CAAGCAGCTAGAAAAAAAT 10060461 >seq11 Length=35963958 Score = 102 bits (112), Expect = 2e-17 Identities = 140/195 (72%), Gaps = 3/195 (2%) Strand=Plus/Plus Query 21608 ATTCAAGTTGAAAGCCATGGTAGACACGCCAAGCGCAGCAAACCAAATACCTACAACAGG 21667 ||| || ||||||| ||||||| | | | | | |||| | |||| ||| || | Sbjct 26906270 ATTTAAATTGAAAGTCATGGTACTAATACTTAATGTGGTAAACGACATACTTACTGCAAG 26906329 Query 21668 CCAGGCAGCAAGAAAGAAATGAAGACTACGGGAATTATTAAAGCTAGCATATTGGAAGAT 21727 | | || | | ||||||||| | | ||| |||||||| || |||||||||| |||||| Sbjct 26906330 CAAACCAACTAAAAAGAAATGTAAAGAACGAGAATTATTGAAACTAGCATATTAGAAGAT 26906389 Query 21728 AAGCCGACCAAAATAGCCGTGAGCAGCAACAATATTGTAAGTCTCTTCCTCTTGACCAAA 21787 || || ||||||| | |||||||| ||||||| | | |||||||||||||| | Sbjct 26906390 AAATCGGTCAAAATAACTATGAGCAGCTACAATATAGA---TTTCTTCCTCTTGACCTGA 26906446 Query 21788 CTTGTAACCATAGTT 21802 ||||||| | ||| Sbjct 26906447 TATGTAACCTTCGTT 26906461 Score = 98.7 bits (108), Expect = 3e-16 Identities = 83/102 (81%), Gaps = 0/102 (0%) Strand=Plus/Plus Query 21695 ACGGGAATTATTAAAGCTAGCATATTGGAAGATAAGCCGACCAAAATAGCCGTGAGCAGC 21754 ||| |||||||| || ||||||||||||||||| | || |||||||| || |||| | | Sbjct 32634438 ACGAGAATTATTGAAACTAGCATATTGGAAGATCAATCGGCCAAAATAACCATGAGAAAC 32634497 Query 21755 AACAATATTGTAAGTCTCTTCCTCTTGACCAAACTTGTAACC 21796 |||||||| || || |||||||||| | |||| ||||||| Sbjct 32634498 TACAATATTATAGGTTTCTTCCTCTTAATCAAATCTGTAACC 32634539 >seq8 Length=25521646 Score = 102 bits (112), Expect = 2e-17 Identities = 152/213 (71%), Gaps = 2/213 (1%) Strand=Plus/Minus Query 22017 GGATAAACAAGGAACACAGCAGTCGCAGCGGCGACAGGAGCAGAGTACGCAACAAAGATC 22076 ||||||| | ||| | | |||||| ||| || ||| |||| || || ||||| ||| Sbjct 14925000 GGATAAATCAAGAAAAAAACAGTCGTAGCTGCAACAAGAGCTGAATATGCAACCGCAATC 14924941 Query 22077 CAGGGCCTCATCCCTAGTCGATAGCTAAGTTCCCACTCTCGTCCCATGTAAGCAAAGACG 22136 || || ||| || | ||| | |||||||||||||| || || |||||| | || Sbjct 14924940 CAAGGGTGCATACCCAAACGAAAACTAAGTTCCCACTCGCGACCTATGTAACAAGCTACA 14924881 Query 22137 CCAATGAGGAAGTGGAATACGGTGAGTTGGAATGGACCGCCGTTGTACAGCCATTCATCA 22196 |||| | |||||| | || | |||| | |||||||| ||||| | |||||||||| Sbjct 14924880 CCAAGTAAGAAGTGTAGAACAATTAGTTAATAAGGACCGCCATTGTATAACCATTCATCA 14924821 Query 22197 A-GTGTAGCAGCTTCCCAAATTGGGTAGAAGTG 22228 | || | || ||||||| || | ||| ||||| Sbjct 14924820 ACGTAT-GCCACTTCCCATATCGAGTAAAAGTG 14924789 >seq17 Length=21299880 Score = 98.7 bits (108), Expect = 3e-16 Identities = 84/104 (81%), Gaps = 0/104 (0%) Strand=Plus/Plus Query 21699 GAATTATTAAAGCTAGCATATTGGAAGATAAGCCGACCAAAATAGCCGTGAGCAGCAACA 21758 |||||||| || ||| ||||||||||||| | | |||||||| || | |||||| ||| Sbjct 21194108 GAATTATTGAAACTATCATATTGGAAGATCAATCAGCCAAAATAACCATTAGCAGCTACA 21194167 Query 21759 ATATTGTAAGTCTCTTCCTCTTGACCAAACTTGTAACCATAGTT 21802 ||||| || | ||||||||||||||||| ||||||| | ||| Sbjct 21194168 ATATTATAGATTTCTTCCTCTTGACCAAATCTGTAACCTTCGTT 21194211 Score = 87.8 bits (96), Expect = 5e-13 Identities = 71/86 (83%), Gaps = 0/86 (0%) Strand=Plus/Minus Query 21879 CCACCAAATACGCCGGCCACACCCAGCATGTGAAAAGGATGCATAAGAATATTGTGCTCA 21938 || || ||||| || || || || | ||||||||| |||||||||||||||||||||||| Sbjct 19911048 CCGCCGAATACACCAGCTACGCCTAACATGTGAAATGGATGCATAAGAATATTGTGCTCA 19910989 Query 21939 GCCTGGAACACCAGCATGTAGTTGAA 21964 ||||| || || | ||| ||||||| Sbjct 19910988 GCCTGAAATACAATCATAAAGTTGAA 19910963 >seq3 Length=30153019 Score = 89.7 bits (98), Expect = 2e-13 Identities = 187/275 (68%), Gaps = 4/275 (1%) Strand=Plus/Minus Query 22203 GCAGCTTCCCAAATTGGGTAGAAGTGTAGTCCGATGGCATTACTGCTCGGAACGACGGCT 22262 || |||||||| || ||||| ||||| | ||||| || | | |||| | || Sbjct 19659976 GCCGCTTCCCATATCGGGTAAAAGTGCAAACCGATAGCCGCAGAAGTAGGAATAATAGCA 19659917 Query 22263 CCTGATATGATGTTGTTACCATACAACAGGGAGCCAGCGACGGGTTCTCGGATTCCATCG 22322 || || || || ||||| || || | || || |||| || || || || || ||||| Sbjct 19659916 CCCGAAATAATATTGTTTCCGTAAAGTAGAGATCCAGAAACAGGCTCACGAATACCATCA 19659857 Query 22323 ATGTCAACAGGTGGTGCGCCAACAAAGGCGATAATAAAACAAGTTGTAGCGG-CAAGGAG 22381 || || || || || || ||| || ||||||||||| || || |||| ||| || Sbjct 19659856 ATATCTACTGGAGGGGCAGCAATGAAAGCGATAATAAATACAGAAGTTGCGGTCAATAAG 19659797 Query 22382 GCACGGAATCATAAGGACTCCGAACCATCCTACATAAAGACGGTTATTAGTAGAGGTGAC 22441 | | ||| |||| | || || |||||||| | ||||||||||| | ||| ||| | Sbjct 19659796 GTAGGGA-TCATCAAAACACCAAACCATCCGATGTAAAGACGGTTTTCAGTGCTGGTTAT 19659738 Query 22442 CCAGGAACAAAACTGCTCCC--AGGCATTCTCTCT 22474 |||| ||| || | ||| |||| ||| |||| Sbjct 19659737 CCAGTTACAGAAGCGACCCCATAGGCTTTCGCTCT 19659703 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 146184434285940