Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Lupinus_20angustifolius_20[refseq_20GCF_5F001865875.1_202016-11-16]
13,573 sequences; 609,203,021 total letters
Query= NC_020838.1
Length=45728
Score E
Sequences producing significant alignments: (Bits) Value
seq664 562 9e-156
seq19 228 2e-55
seq1 163 8e-36
seq9 152 2e-32
seq5 129 2e-25
seq11 102 2e-17
seq8 102 2e-17
seq17 98.7 3e-16
seq3 89.7 2e-13
>seq664
Length=18451
Score = 562 bits (622), Expect = 9e-156
Identities = 731/1007 (73%), Gaps = 4/1007 (0%)
Strand=Plus/Plus
Query 21471 GCAAGGTCAAGCGGGAAGTTGTGTGCGTTCCGCTCATGCATCACCTCAAAGCCAAGGTTG 21530
|| ||||| || |||||||| || || || || |||||||| || || | ||||||||
Sbjct 524 GCTAGGTCTAGAGGGAAGTTATGAGCATTACGTTCATGCATAACTTCCATACCAAGGTTA 583
Query 21531 GCACGGTTAAGAATGTCAGCCCAGGTGTTGATCACCTGTCCATCAGCAGCTAGCAGAGAT 21590
|| ||||||| ||| ||||||||||| || || || | || | | | | | | |||
Sbjct 584 GCTCGGTTAATAATATCAGCCCAGGTATTAATTACACGACCTTGACTATCAACTACGGAT 643
Query 21591 TGGTTAAAGTTGAAACCATTCAAGTTGAAAGCCATGGTAGACACGCCAAGCGCAGCAAAC 21650
||||| || ||||||||||| || ||||||||||||||| | || | ||| | ||||
Sbjct 644 TGGTTGAAATTGAAACCATTTAAATTGAAAGCCATGGTACTGATACCTAACGCGGTAAAC 703
Query 21651 CAAATACCTACAACAGGCCAGGCAGCAAGAAAGAAATGAAGACTACGGGAATTATTAAAG 21710
|| |||||||| |||||||| ||||| ||||||||||| | | ||| |||||||| ||
Sbjct 704 CAGATACCTACTACAGGCCAAGCAGCTAGAAAGAAATGTAAAGAACGAGAATTATTGAAA 763
Query 21711 CTAGCATATTGGAAGATAAGCCGACCAAAATAGCCGTGAGCAGCAACAATATTGTAAGTC 21770
||||||||||||||||| | || |||||||| || |||||||| |||||||| || ||
Sbjct 764 CTAGCATATTGGAAGATCAATCGGCCAAAATAACCATGAGCAGCTACAATATTATAGGTT 823
Query 21771 TCTTCCTCTTGACCAAACTTGTAACCATAGTTCTGTGAAACCTCTTCAGTCGTCTCACGA 21830
||||||||||||||||| ||||||| | ||| || | | ||| || || || |
Sbjct 824 TCTTCCTCTTGACCAAATCTGTAACCTTCGTTAGCAGATTCATTTTCTGTGGTTTCCCTG 883
Query 21831 ATGAGTGACGACGTGACCAGGCTACCGTGCATAGCAGAGAACAAACTCCCACCAAATACG 21890
|| | || || |||| | ||||||||||||| ||| | || || |||||
Sbjct 884 ATCAAACTAGAAGTTACCAAGGAACCGTGCATAGCACTGAATAGGGAGCCGCCGAATACA 943
Query 21891 CCGGCCACACCCAGCATGTGAAAAGGATGCATAAGAATATTGTGCTCAGCCTGGAACACC 21950
|| || || || | ||||||||| ||||||||||||||||||||||||||||| || ||
Sbjct 944 CCAGCTACGCCTAACATGTGAAATGGATGCATAAGAATATTGTGCTCAGCCTGAAATACA 1003
Query 21951 AGCATGTAGTTGAAGGTGCCGGATATCCCCAAGGGCATAGCATCAGAAAAAGAGCCCTGT 22010
| ||| ||||||| || || || || || | |||||| |||| ||||| || ||
Sbjct 1004 ATCATAAAGTTGAAAGTACCAGAGATTCCTAGAGGCATACCATCCGAAAAGCTTCCTTGA 1063
Query 22011 CCAAACGGATAAACAAGGAACACAGCAGTCGCAGCGGCGACAGGAGCAGAGTACGCAACA 22070
|| | ||||||| | ||| |||||||| ||||| || |||||||| || || |||||
Sbjct 1064 CCGATTGGATAAATCAAGAAAACAGCAGTAGCAGCTGCAACAGGAGCTGAATATGCAACC 1123
Query 22071 AAGATCCAGGGCCTCATCCCTAGTCGATAGCTAAGTTCCCACTCTCGTCCCATGTAAGCA 22130
||||| || | ||| || || ||| | |||||||||||||| || ||||||||| |
Sbjct 1124 GCAATCCAAGGGCGCATACCCAGACGAAAACTAAGTTCCCACTCACGACCCATGTAACAA 1183
Query 22131 AAGACGCCAATGAGGAAGTGGAATACGGTGAGTTGGAATGGACCGCCGTTGTACAGCCAT 22190
|| |||| | |||||| | || | |||| | |||||||| ||||| | ||||
Sbjct 1184 GCTACACCAAGTAAGAAGTGTAGAACAATTAGTTCATAAGGACCGCCATTGTATAACCAT 1243
Query 22191 TCATCAAGTGTAGCAGCTTCCCAAATTGGGTAGAAGTGTAGTCCGATGGCATTACTGCTC 22250
||||||| | || |||||||| || ||||| ||||| | ||||| || | |
Sbjct 1244 TCATCAACGGATGCCGCTTCCCATATCGGGTAAAAGTGCAAACCGATAGCCGCAGAAGTA 1303
Query 22251 GGAACGACGGCTCCTGATATGATGTTGTTACCATACAACAGGGAGCCAGCGACGGGTTCT 22310
|||| | || || || || || ||||| || || | || || |||| || || ||
Sbjct 1304 GGAATAATAGCACCCGAAATAATATTGTTTCCGTAAAGTAGAGATCCAGAAACAGGCTCA 1363
Query 22311 CGGATTCCATCGATGTCAACAGGTGGTGCGCCAACAAAGGCGATAATAAAACAAGTTGTA 22370
|| || ||||| || || || || || || ||| || ||||||||||| || ||
Sbjct 1364 CGAATACCATCAATATCTACTGGAGGGGCAGCAATGAAAGCGATAATAAATACAGAAGTT 1423
Query 22371 GCGG-CAAGGAGGCACGGAATCATAAGGACTCCGAACCATCCTACATAAAGACGGTTATT 22429
|||| ||| ||| | || ||||| | || || |||||||| | ||||||||||| |
Sbjct 1424 GCGGTCAATAAGGTA-GGGATCATCAAAACACCAAACCATCCGATGTAAAGACGGTTTTC 1482
Query 22430 AGTAGAGGTGACCCAGGAACAAAACTGCTCCC--AGGCATTCTCTCT 22474
||| ||| | |||| ||| || | ||| |||| ||| ||||
Sbjct 1483 AGTGCTGGTTATCCAGTTACAGAAGCGACCCCATAGGCTTTCGCTCT 1529
>seq19
Length=18159812
Score = 228 bits (252), Expect = 2e-55
Identities = 221/284 (78%), Gaps = 0/284 (0%)
Strand=Plus/Minus
Query 21471 GCAAGGTCAAGCGGGAAGTTGTGTGCGTTCCGCTCATGCATCACCTCAAAGCCAAGGTTG 21530
|| ||||| || |||||||| || || || || |||||||| || || | ||||||||
Sbjct 6185718 GCTAGGTCTAGAGGGAAGTTATGAGCATTACGTTCATGCATAACTTCCATACCAAGGTTA 6185659
Query 21531 GCACGGTTAAGAATGTCAGCCCAGGTGTTGATCACCTGTCCATCAGCAGCTAGCAGAGAT 21590
|| ||||||| ||| ||||||||||| || || || | || | | | | | | |||
Sbjct 6185658 GCTCGGTTAATAATATCAGCCCAGGTATTAATTACACGACCTTGACTATCAACTACGGAT 6185599
Query 21591 TGGTTAAAGTTGAAACCATTCAAGTTGAAAGCCATGGTAGACACGCCAAGCGCAGCAAAC 21650
||||| || ||||||||||| || ||||||||||||||| | || | ||| | ||||
Sbjct 6185598 TGGTTGAAATTGAAACCATTTAAATTGAAAGCCATGGTACTGATACCTAACGCGGTAAAC 6185539
Query 21651 CAAATACCTACAACAGGCCAGGCAGCAAGAAAGAAATGAAGACTACGGGAATTATTAAAG 21710
|| |||||||| |||||||| ||||| ||||||||||| | | ||| |||||||| ||
Sbjct 6185538 CAGATACCTACTACAGGCCAAGCAGCTAGAAAGAAATGTAAAGAACGAGAATTATTGAAA 6185479
Query 21711 CTAGCATATTGGAAGATAAGCCGACCAAAATAGCCGTGAGCAGC 21754
||||||||||||||||| | || |||||||| || ||||||||
Sbjct 6185478 CTAGCATATTGGAAGATCAATCGGCCAAAATAACCATGAGCAGC 6185435
>seq1
Length=36457581
Score = 163 bits (180), Expect = 8e-36
Identities = 183/245 (75%), Gaps = 0/245 (0%)
Strand=Plus/Minus
Query 21474 AGGTCAAGCGGGAAGTTGTGTGCGTTCCGCTCATGCATCACCTCAAAGCCAAGGTTGGCA 21533
||||| || |||||||| || || || || |||||||| || || | ||||||||| ||
Sbjct 19599589 AGGTCTAGAGGGAAGTTATGAGCATTACGTTCATGCATAACTTCCATGCCAAGGTTAGCT 19599530
Query 21534 CGGTTAAGAATGTCAGCCCAGGTGTTGATCACCTGTCCATCAGCAGCTAGCAGAGATTGG 21593
||||| | ||| |||||||| | || || || | || | | | | | | ||||||
Sbjct 19599529 CGGTTTATAATATCAGCCCATATATTAATTACACGACCTTGACTATCAACTATGGATTGG 19599470
Query 21594 TTAAAGTTGAAACCATTCAAGTTGAAAGCCATGGTAGACACGCCAAGCGCAGCAAACCAA 21653
|| || ||||||||||| || ||||||||||||||| || | ||| | ||||||
Sbjct 19599469 TTGAAATTGAAACCATTTAAATTGAAAGCCATGGTACTGGTACCTAACGCGGTAAACCAG 19599410
Query 21654 ATACCTACAACAGGCCAGGCAGCAAGAAAGAAATGAAGACTACGGGAATTATTAAAGCTA 21713
|||||||| |||||||| ||||| | ||||||||| | | ||| || |||| || |||
Sbjct 19599409 ATACCTACTACAGGCCAAGCAGCTAAAAAGAAATGTAAAGAACGAGACTTATCGAAACTA 19599350
Query 21714 GCATA 21718
|||||
Sbjct 19599349 GCATA 19599345
>seq9
Length=21753712
Score = 152 bits (168), Expect = 2e-32
Identities = 185/251 (74%), Gaps = 1/251 (0%)
Strand=Plus/Plus
Query 21471 GCAAGGTCAAGCGGGAAGTTGTGTGCGTTCCGCTCATGCATCACCTCAAAGCCAAGGTTG 21530
|| ||||| || ||||||| || || || || ||||| || || || | ||||||||
Sbjct 18376389 GCTAGGTCTAGATGGAAGTTATGAGCATTACGTTCATGTATAACTTCCATACCAAGGTTA 18376448
Query 21531 GCACGGTTAAGAATGTCAGCCCAGGTGTTGATCACCTGTCCATCAGCAGCTAGCAGAGAT 21590
|| ||||||| ||| ||||| ||| | || || || | || | | | | | | | ||
Sbjct 18376449 GCTCGGTTAATAATATCAGCTCAGATATTAATTACACGACCTTGACTATCAACTACATAT 18376508
Query 21591 TGGTTAAAGTTGAAACCATTCAAGTTGAAAGCCATGGTAGACACGCCAAGCGCAG-CAAA 21649
||||| || ||||||||||| ||||||||||||||||| | || | || | |||
Sbjct 18376509 TGGTTGAAATTGAAACCATTTAAGTTGAAAGCCATGGTGCTGATACCTAATGCGGTTAAA 18376568
Query 21650 CCAAATACCTACAACAGGCCAGGCAGCAAGAAAGAAATGAAGACTACGGGAATTATTAAA 21709
||| |||||||| |||||||| || | ||||||||||| | | || |||||||| ||
Sbjct 18376569 CCAGATACCTACTACAGGCCAAACAACTAGAAAGAAATGTAAAGAACAAGAATTATTGAA 18376628
Query 21710 GCTAGCATATT 21720
||||||||||
Sbjct 18376629 ACTAGCATATT 18376639
>seq5
Length=26376911
Score = 129 bits (142), Expect = 2e-25
Identities = 227/328 (69%), Gaps = 2/328 (1%)
Strand=Plus/Plus
Query 22106 TTCCCACTCTCGTCCCATGTAAGCAAAGACGCCAATGAGGAAGTGGAATACGGTGAGTTG 22165
||||||||| || ||||||||| | || |||| | |||||| | || | ||||
Sbjct 10577032 TTCCCACTCACGACCCATGTAACAAGCTACACCAAGTAAGAAGTGTAGAACAATTAGTTC 10577091
Query 22166 GAATGGACCGCCGTTGTACAGCCATTCATCAAGTGTAGCAGCTTCCCAAATTGGGTAGAA 22225
| |||||||| ||||| | ||||||||||| | || |||||||| || ||||| ||
Sbjct 10577092 ATAAGGACCGCCATTGTATAACCATTCATCAACGGATGCCGCTTCCCATATCGGGTAAAA 10577151
Query 22226 GTGTAGTCCGATGGCATTACTGCTCGGAACGACGGCTCCTGATATGATGTTGTTACCATA 22285
||| | ||||| || | | |||| | || || || || || ||||| || ||
Sbjct 10577152 GTGCAAACCGATAGCCGCAGAAGTAGGAATAATAGCACCCGAAATAATATTGTTTCCGTA 10577211
Query 22286 CAACAGGGAGCCAGCGACGGGTTCTCGGATTCCATCGATGTCAACAGGTGGTGCGCCAAC 22345
| || || |||| || || || || || ||||| || || || || | || |||
Sbjct 10577212 AAGTAGAGATCCAGAAACAGGCTCACGAATACCATCAATATCTACTGGAAGGGCAGCAAT 10577271
Query 22346 AAAGGCGATAATAAAACAAGTTGTAGCGG-CAAGGAGGCACGGAATCATAAGGACTCCGA 22404
|| ||||||||||| || || |||| ||| ||| | || ||||| | || || |
Sbjct 10577272 GAAAGCGATAATAAATACAGAAGTTGCGGTCAATAAGGTA-GGGATCATCAAAACACCAA 10577330
Query 22405 ACCATCCTACATAAAGACGGTTATTAGT 22432
||||||| | ||||||||||| | |||
Sbjct 10577331 ACCATCCGATGTAAAGACGGTTTTCAGT 10577358
Score = 109 bits (120), Expect = 2e-19
Identities = 155/217 (71%), Gaps = 1/217 (0%)
Strand=Plus/Plus
Query 21471 GCAAGGTCAAGCGGGAAGTTGTGTGCGTTCCGCTCATGCATCACCTCAAAGCCAAGGTTG 21530
|| ||||| || |||||||| || || || | |||||||| || || | ||||||||
Sbjct 10060246 GCTAGGTCTAGAGGGAAGTTATGAGCATTATGTTCATGCATAACTTCCATACCAAGGTTA 10060305
Query 21531 GCACGGTTAAGAATGTCAGCCCAGGTGTTGATCACCTGTCCATCAGCAGCTAGCAGAGAT 21590
|| ||||||| ||| || |||||| || || || | || | | | | | | |||
Sbjct 10060306 GCTCGGTTAATAATAATAGTCCAGGTATTAATTACACGACCTTGACTATCAACTATGGAT 10060365
Query 21591 TGGTTAAAGTTGAAACCATTCAAGTTGAAAGCCATGGTAGACACGCCAAGCGCAGCAAAC 21650
||||| || ||||||||||| || ||||||| ||| ||| | || | || ||||
Sbjct 10060366 TGGTTGAAATTGAAACCATTTAAATTGAAAGTCATAGTACTAATACCTAATGCGATAAAC 10060425
Query 21651 CAAATACCTACAACAGGCCAGGCAGCAAGAAAGAAAT 21687
|| | |||||| | ||| || ||||| ||||| ||||
Sbjct 10060426 CAGACACCTACTATAGG-CAAGCAGCTAGAAAAAAAT 10060461
>seq11
Length=35963958
Score = 102 bits (112), Expect = 2e-17
Identities = 140/195 (72%), Gaps = 3/195 (2%)
Strand=Plus/Plus
Query 21608 ATTCAAGTTGAAAGCCATGGTAGACACGCCAAGCGCAGCAAACCAAATACCTACAACAGG 21667
||| || ||||||| ||||||| | | | | | |||| | |||| ||| || |
Sbjct 26906270 ATTTAAATTGAAAGTCATGGTACTAATACTTAATGTGGTAAACGACATACTTACTGCAAG 26906329
Query 21668 CCAGGCAGCAAGAAAGAAATGAAGACTACGGGAATTATTAAAGCTAGCATATTGGAAGAT 21727
| | || | | ||||||||| | | ||| |||||||| || |||||||||| ||||||
Sbjct 26906330 CAAACCAACTAAAAAGAAATGTAAAGAACGAGAATTATTGAAACTAGCATATTAGAAGAT 26906389
Query 21728 AAGCCGACCAAAATAGCCGTGAGCAGCAACAATATTGTAAGTCTCTTCCTCTTGACCAAA 21787
|| || ||||||| | |||||||| ||||||| | | |||||||||||||| |
Sbjct 26906390 AAATCGGTCAAAATAACTATGAGCAGCTACAATATAGA---TTTCTTCCTCTTGACCTGA 26906446
Query 21788 CTTGTAACCATAGTT 21802
||||||| | |||
Sbjct 26906447 TATGTAACCTTCGTT 26906461
Score = 98.7 bits (108), Expect = 3e-16
Identities = 83/102 (81%), Gaps = 0/102 (0%)
Strand=Plus/Plus
Query 21695 ACGGGAATTATTAAAGCTAGCATATTGGAAGATAAGCCGACCAAAATAGCCGTGAGCAGC 21754
||| |||||||| || ||||||||||||||||| | || |||||||| || |||| | |
Sbjct 32634438 ACGAGAATTATTGAAACTAGCATATTGGAAGATCAATCGGCCAAAATAACCATGAGAAAC 32634497
Query 21755 AACAATATTGTAAGTCTCTTCCTCTTGACCAAACTTGTAACC 21796
|||||||| || || |||||||||| | |||| |||||||
Sbjct 32634498 TACAATATTATAGGTTTCTTCCTCTTAATCAAATCTGTAACC 32634539
>seq8
Length=25521646
Score = 102 bits (112), Expect = 2e-17
Identities = 152/213 (71%), Gaps = 2/213 (1%)
Strand=Plus/Minus
Query 22017 GGATAAACAAGGAACACAGCAGTCGCAGCGGCGACAGGAGCAGAGTACGCAACAAAGATC 22076
||||||| | ||| | | |||||| ||| || ||| |||| || || ||||| |||
Sbjct 14925000 GGATAAATCAAGAAAAAAACAGTCGTAGCTGCAACAAGAGCTGAATATGCAACCGCAATC 14924941
Query 22077 CAGGGCCTCATCCCTAGTCGATAGCTAAGTTCCCACTCTCGTCCCATGTAAGCAAAGACG 22136
|| || ||| || | ||| | |||||||||||||| || || |||||| | ||
Sbjct 14924940 CAAGGGTGCATACCCAAACGAAAACTAAGTTCCCACTCGCGACCTATGTAACAAGCTACA 14924881
Query 22137 CCAATGAGGAAGTGGAATACGGTGAGTTGGAATGGACCGCCGTTGTACAGCCATTCATCA 22196
|||| | |||||| | || | |||| | |||||||| ||||| | ||||||||||
Sbjct 14924880 CCAAGTAAGAAGTGTAGAACAATTAGTTAATAAGGACCGCCATTGTATAACCATTCATCA 14924821
Query 22197 A-GTGTAGCAGCTTCCCAAATTGGGTAGAAGTG 22228
| || | || ||||||| || | ||| |||||
Sbjct 14924820 ACGTAT-GCCACTTCCCATATCGAGTAAAAGTG 14924789
>seq17
Length=21299880
Score = 98.7 bits (108), Expect = 3e-16
Identities = 84/104 (81%), Gaps = 0/104 (0%)
Strand=Plus/Plus
Query 21699 GAATTATTAAAGCTAGCATATTGGAAGATAAGCCGACCAAAATAGCCGTGAGCAGCAACA 21758
|||||||| || ||| ||||||||||||| | | |||||||| || | |||||| |||
Sbjct 21194108 GAATTATTGAAACTATCATATTGGAAGATCAATCAGCCAAAATAACCATTAGCAGCTACA 21194167
Query 21759 ATATTGTAAGTCTCTTCCTCTTGACCAAACTTGTAACCATAGTT 21802
||||| || | ||||||||||||||||| ||||||| | |||
Sbjct 21194168 ATATTATAGATTTCTTCCTCTTGACCAAATCTGTAACCTTCGTT 21194211
Score = 87.8 bits (96), Expect = 5e-13
Identities = 71/86 (83%), Gaps = 0/86 (0%)
Strand=Plus/Minus
Query 21879 CCACCAAATACGCCGGCCACACCCAGCATGTGAAAAGGATGCATAAGAATATTGTGCTCA 21938
|| || ||||| || || || || | ||||||||| ||||||||||||||||||||||||
Sbjct 19911048 CCGCCGAATACACCAGCTACGCCTAACATGTGAAATGGATGCATAAGAATATTGTGCTCA 19910989
Query 21939 GCCTGGAACACCAGCATGTAGTTGAA 21964
||||| || || | ||| |||||||
Sbjct 19910988 GCCTGAAATACAATCATAAAGTTGAA 19910963
>seq3
Length=30153019
Score = 89.7 bits (98), Expect = 2e-13
Identities = 187/275 (68%), Gaps = 4/275 (1%)
Strand=Plus/Minus
Query 22203 GCAGCTTCCCAAATTGGGTAGAAGTGTAGTCCGATGGCATTACTGCTCGGAACGACGGCT 22262
|| |||||||| || ||||| ||||| | ||||| || | | |||| | ||
Sbjct 19659976 GCCGCTTCCCATATCGGGTAAAAGTGCAAACCGATAGCCGCAGAAGTAGGAATAATAGCA 19659917
Query 22263 CCTGATATGATGTTGTTACCATACAACAGGGAGCCAGCGACGGGTTCTCGGATTCCATCG 22322
|| || || || ||||| || || | || || |||| || || || || || |||||
Sbjct 19659916 CCCGAAATAATATTGTTTCCGTAAAGTAGAGATCCAGAAACAGGCTCACGAATACCATCA 19659857
Query 22323 ATGTCAACAGGTGGTGCGCCAACAAAGGCGATAATAAAACAAGTTGTAGCGG-CAAGGAG 22381
|| || || || || || ||| || ||||||||||| || || |||| ||| ||
Sbjct 19659856 ATATCTACTGGAGGGGCAGCAATGAAAGCGATAATAAATACAGAAGTTGCGGTCAATAAG 19659797
Query 22382 GCACGGAATCATAAGGACTCCGAACCATCCTACATAAAGACGGTTATTAGTAGAGGTGAC 22441
| | ||| |||| | || || |||||||| | ||||||||||| | ||| ||| |
Sbjct 19659796 GTAGGGA-TCATCAAAACACCAAACCATCCGATGTAAAGACGGTTTTCAGTGCTGGTTAT 19659738
Query 22442 CCAGGAACAAAACTGCTCCC--AGGCATTCTCTCT 22474
|||| ||| || | ||| |||| ||| ||||
Sbjct 19659737 CCAGTTACAGAAGCGACCCCATAGGCTTTCGCTCT 19659703
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 146184434285940
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |