Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lupinus_20angustifolius_20[refseq_20GCF_5F001865875.1_202016-11-16] 13,573 sequences; 609,203,021 total letters Query= NC_020842.1 Length=79114 Score E Sequences producing significant alignments: (Bits) Value seq2896 89.7 3e-13 seq11 84.2 1e-11 >seq2896 Length=25968 Score = 89.7 bits (98), Expect = 3e-13 Identities = 154/221 (70%), Gaps = 2/221 (1%) Strand=Plus/Minus Query 26064 TACCTTTTCTTTTTCCTCCACCTTGATCTACGTATCTTGCAGTTTCATTGAAAACTTTCA 26123 ||||||| || ||||||||||||||||| || || | ||||| |||||||| || || Sbjct 4795 TACCTTTCCTCTTTCCTCCACCTTGATCAACATAGCGCGCAGTATCATTGAACACACGCA 4736 Query 26124 ACATTGGAACTAAT-CCAGTTGAAAATCCGTTTGTGCTATGAATCTTGGATCCTGTCGAT 26182 |||||||| |||| ||| | || || ||||| | | |||| | ||||| | Sbjct 4735 GCATTGGAA-TAATGCCATTGGATGTCCCATTTGTCCCACGAATGTAACTGCCTGTGGCA 4677 Query 26183 CTAATATCGTGAGCATGAATACCGATTCCACCAGCCCATTTTGAAATAGCTGCACAATCT 26242 | ||||| |||| || | ||| ||||| ||||| |||| || | ||||| ||| Sbjct 4676 CGAATATTGTGAACAGAGACACCAATTCCTCCAGCTGATTTACTGATGACAGCACACTCT 4617 Query 26243 GAAACTGTATCGAAAATTCCTTTTATGCTATCACCTTTCAT 26283 | || || | || || | ||| |||||| ||||||| Sbjct 4616 TTCAAAGTTTCATATATACCCTCTATACTATCATCTTTCAT 4576 >seq11 Length=35963958 Score = 84.2 bits (92), Expect = 1e-11 Identities = 153/222 (69%), Gaps = 4/222 (2%) Strand=Plus/Minus Query 26064 TACCTTTTCTTTTTCCTCCACCTTGATCTACGTATCTTGCAGTTTCATTGAAAACTTTCA 26123 ||||||| || || |||||||||||||| || || | ||||| ||||| ||||| || Sbjct 31406841 TACCTTTCCTCTTGCCTCCACCTTGATCAACATAGCGAGCAGTATCATTAAAAACACGCA 31406782 Query 26124 ACATTGGAACTAATCCAGTTGAAAATCCGTTTGTGCTATGAATCTTGGATCCTGTCGATC 26183 ||||||||| | ||| | || || || || | | || | ||||| | || Sbjct 31406781 GCATTGGAACAATACCATTGGATGTCCCATTAGTTCCCCGGATGTAACTGCCTGTGGCTC 31406722 Query 26184 TAATATCGTGAGCATGAATACCGATTCCACCAGCCCATTTTGAAATAGCTGCACAATC-- 26241 || | |||| || || ||| ||||| ||||| |||| || || ||||| || Sbjct 31406721 GGATGTTGTGAACAGAAACACCAATTCCTCCAGCTGATTTGCTGATCGCAGCACACTCCT 31406662 Query 26242 TGAAACTGTATCGAAAATTCCTTTTATGCTATCACCTTTCAT 26283 | ||| ||||| | ||||| | ||| |||||| ||||||| Sbjct 31406661 TCAAA--GTATCATATATTCCCTCTATACTATCATCTTTCAT 31406622 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 252998141885975