Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Lupinus_20angustifolius_20[refseq_20GCF_5F001865875.1_202016-11-16]
13,573 sequences; 609,203,021 total letters
Query= NC_020842.1
Length=79114
Score E
Sequences producing significant alignments: (Bits) Value
seq2896 89.7 3e-13
seq11 84.2 1e-11
>seq2896
Length=25968
Score = 89.7 bits (98), Expect = 3e-13
Identities = 154/221 (70%), Gaps = 2/221 (1%)
Strand=Plus/Minus
Query 26064 TACCTTTTCTTTTTCCTCCACCTTGATCTACGTATCTTGCAGTTTCATTGAAAACTTTCA 26123
||||||| || ||||||||||||||||| || || | ||||| |||||||| || ||
Sbjct 4795 TACCTTTCCTCTTTCCTCCACCTTGATCAACATAGCGCGCAGTATCATTGAACACACGCA 4736
Query 26124 ACATTGGAACTAAT-CCAGTTGAAAATCCGTTTGTGCTATGAATCTTGGATCCTGTCGAT 26182
|||||||| |||| ||| | || || ||||| | | |||| | ||||| |
Sbjct 4735 GCATTGGAA-TAATGCCATTGGATGTCCCATTTGTCCCACGAATGTAACTGCCTGTGGCA 4677
Query 26183 CTAATATCGTGAGCATGAATACCGATTCCACCAGCCCATTTTGAAATAGCTGCACAATCT 26242
| ||||| |||| || | ||| ||||| ||||| |||| || | ||||| |||
Sbjct 4676 CGAATATTGTGAACAGAGACACCAATTCCTCCAGCTGATTTACTGATGACAGCACACTCT 4617
Query 26243 GAAACTGTATCGAAAATTCCTTTTATGCTATCACCTTTCAT 26283
| || || | || || | ||| |||||| |||||||
Sbjct 4616 TTCAAAGTTTCATATATACCCTCTATACTATCATCTTTCAT 4576
>seq11
Length=35963958
Score = 84.2 bits (92), Expect = 1e-11
Identities = 153/222 (69%), Gaps = 4/222 (2%)
Strand=Plus/Minus
Query 26064 TACCTTTTCTTTTTCCTCCACCTTGATCTACGTATCTTGCAGTTTCATTGAAAACTTTCA 26123
||||||| || || |||||||||||||| || || | ||||| ||||| ||||| ||
Sbjct 31406841 TACCTTTCCTCTTGCCTCCACCTTGATCAACATAGCGAGCAGTATCATTAAAAACACGCA 31406782
Query 26124 ACATTGGAACTAATCCAGTTGAAAATCCGTTTGTGCTATGAATCTTGGATCCTGTCGATC 26183
||||||||| | ||| | || || || || | | || | ||||| | ||
Sbjct 31406781 GCATTGGAACAATACCATTGGATGTCCCATTAGTTCCCCGGATGTAACTGCCTGTGGCTC 31406722
Query 26184 TAATATCGTGAGCATGAATACCGATTCCACCAGCCCATTTTGAAATAGCTGCACAATC-- 26241
|| | |||| || || ||| ||||| ||||| |||| || || ||||| ||
Sbjct 31406721 GGATGTTGTGAACAGAAACACCAATTCCTCCAGCTGATTTGCTGATCGCAGCACACTCCT 31406662
Query 26242 TGAAACTGTATCGAAAATTCCTTTTATGCTATCACCTTTCAT 26283
| ||| ||||| | ||||| | ||| |||||| |||||||
Sbjct 31406661 TCAAA--GTATCATATATTCCCTCTATACTATCATCTTTCAT 31406622
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 252998141885975
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |