Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lupinus_20angustifolius_20[refseq_20GCF_5F001865875.1_202016-11-16] 13,573 sequences; 609,203,021 total letters Query= NC_020852.1 Length=186468 Score E Sequences producing significant alignments: (Bits) Value seq2 113 5e-20 seq15 109 7e-19 seq12 109 7e-19 seq12587 105 8e-18 seq1 98.7 1e-15 seq11 95.1 1e-14 seq16 91.5 2e-13 seq7 89.7 6e-13 seq18 87.8 2e-12 >seq2 Length=24697652 Score = 113 bits (124), Expect = 5e-20 Identities = 115/150 (77%), Gaps = 0/150 (0%) Strand=Plus/Minus Query 65068 TCCTTCGCCGAGCGCCTTTTTGCGTTTGCGTGTGTGGAGGGTATCTTCTTCTCCGGGTCA 65127 |||||||| || || || |||||||||| ||||| || ||||| |||||||| || Sbjct 21047076 TCCTTCGCTGAACGTCTCGTTGCGTTTGCTTGTGTTGAAGGTATTTTCTTCTCTGGAAGC 21047017 Query 65128 TTCTGCGCTATTTATTGGTTGAAGAAGCGGGGTCTCATGCCAGGCCTATGCTTCTCAAAT 65187 ||||| || || | |||||||||||| || || || ||||| || || ||||||||| Sbjct 21047016 TTCTGTGCGATATTTTGGTTGAAGAAACGAGGCCTTATGCCTGGTCTTACCTTCTCAAAC 21046957 Query 65188 GAACTTATTTCCCGAGATGAGGGTCTCCAC 65217 || | || || |||||||||||| | ||| Sbjct 21046956 GAGTTAATCTCGCGAGATGAGGGTTTACAC 21046927 >seq15 Length=20964703 Score = 109 bits (120), Expect = 7e-19 Identities = 198/286 (69%), Gaps = 8/286 (3%) Strand=Plus/Plus Query 175396 TTTGTGGAGATGTTTGTTGGTGTGGGTGCCAAAAGGGTTCGCGATCTCTTTGAAATCGCC 175455 |||||||| ||||||||||||| ||||| ||||||| | ||| | ||||||| || Sbjct 20643773 TTTGTGGAATTGTTTGTTGGTGTTGGTGCTTCAAGGGTTAGAGATTTGTTTGAAAAGGCG 20643832 Query 175456 C-GCGAAAATCAACCATGTATTGTCTTCATTGATGAGATTGATGCGGTGGGCAAGCAACG 175514 | ||| | || || ||||| || || ||||| |||||||| ||||| | ||| Sbjct 20643833 AAGTCGAAAGCG-CCTTGCATTGTTTTTATAGATGAAATTGATGCTGTGGGAAGACAA-- 20643889 Query 175515 CAGCGCTGGTGGTATGCCAGCA---AATGACGAGAGAGAACAAACAATTAATCAACTACT 175571 || | || |||||| || ||||| ||||| |||||||| ||||| || || | Sbjct 20643890 -AGGGGTGCAGGTATGGGAGGTGGGAATGATGAGAGGGAACAAACTATTAACCAGTTATT 20643948 Query 175572 CACCGAGATGGATGGCTTTGACAATGAGACTGGCATTGTGGTTATTGCGGCCACTAATCG 175631 |||||||||||||| ||| | | |||| || | ||| | || || || || | Sbjct 20643949 GACCGAGATGGATGGGTTTTCTGGTAATTCTGGTGTTATAGTTTTGGCTGCGACCAACAG 20644008 Query 175632 CGTGGATATCCTTGATGACGCCCTCCTTCGCCCGGGTCGTTTTGAT 175677 ||| | |||||| |||| | | | |||||||| |||||| Sbjct 20644009 ACCTGATGTTCTTGATTCCGCCTTGTTAAGGCCGGGTCGATTTGAT 20644054 >seq12 Length=19065701 Score = 109 bits (120), Expect = 7e-19 Identities = 246/365 (67%), Gaps = 6/365 (2%) Strand=Plus/Minus Query 175315 CCAGGTACGGGAAAGACCCTCCTCGCCCGAGCCATCGCGGGTGAATCAAATGTCCCATTC 175374 ||||| || || ||||| || | ||| || || || |||||| | ||| ||||| Sbjct 8127400 CCAGGAACAGGGAAGACACTGTTAGCCAAGGCTATTGCTGGTGAAGCTGGTGTTCCATTT 8127341 Query 175375 ATC-CAGTGCTCTGCCGCAAACTTTGTGGAGATGTTTGTTGGTGTGGGTGCCAAAAGGGT 175433 || || | ||| | | | ||||| ||||||||||||||||| ||||| |||| Sbjct 8127340 TTCTCAAT-CTCAGGTTCTGAGTTTGTTGAGATGTTTGTTGGTGTTGGTGCTTCTCGGGT 8127282 Query 175434 TCGCGATCTCTTTGAAATCGCCCGCGAAAATCAACCATGTATTGTCTTCATTGATGAGAT 175493 || ||| | || | | ||| || ||| ||||||||||| ||| ||||||| || Sbjct 8127281 ACGTGATTTGTTCAAGAAGGCCAAAGAGAATGCCCCATGTATTGTGTTCGTTGATGAAAT 8127222 Query 175494 TGATGCGGTGGGCAAGCAACGCAGCGCTGG--TGGTATGCCAGCAAATGACGAGAGAGAA 175551 |||||| || || | ||| | | | || | | | | || ||||| || |||||| Sbjct 8127221 TGATGCTGTTGGAAGACAAAGAGGGACCGGAATTGGAGG--AGGGAATGATGAAAGAGAA 8127164 Query 175552 CAAACAATTAATCAACTACTCACCGAGATGGATGGCTTTGACAATGAGACTGGCATTGTG 175611 || || | || ||||| | || || |||||||| ||||| | | ||||| || | Sbjct 8127163 CAGACCCTCAACCAACTTTTGACAGAAATGGATGGGTTTGAGGGTAATACTGGTATCATT 8127104 Query 175612 GTTATTGCGGCCACTAATCGCGTGGATATCCTTGATGACGCCCTCCTTCGCCCGGGTCGT 175671 ||| |||| || ||||| | | || || ||||| ||| | | | |||||||| Sbjct 8127103 GTTGTTGCAGCAACTAACAGAGCCGACATTCTTGACTCTGCCTTATTGAGACCGGGTCGG 8127044 Query 175672 TTTGA 175676 ||||| Sbjct 8127043 TTTGA 8127039 >seq12587 Length=87510 Score = 105 bits (116), Expect = 8e-18 Identities = 249/364 (68%), Gaps = 19/364 (5%) Strand=Plus/Plus Query 159115 ATAAACTTTGGAATGAGTTTCTCCGGGTATTGATTTGGACCATAAACATTATTACAGCGA 159174 || ||||| |||| || || || |||||||| || ||||||||||||||||| | | | Sbjct 86574 ATTAACTTAGGAACAAGCTTTTCTGGGTATTGGTTAGGACCATAAACATTATTTCCTCTA 86633 Query 159175 ATTATTTTGATATTCATATCAAATGATTCTATA-TATGAACGGACTATCATTTCGGCCGC 159233 || | || | | || | || |||| |||| | | | |||||| || | Sbjct 86634 GAGGTTATAATTGGAAGACCATAGGAC-CTATGGTATGCCATGGCCAACATTTCTGCACC 86692 Query 159234 CGCTTTTGATGCTGAATATGGATTTGTTGGTCTAAGTACCCCTGTGTCTTC--GGTGA-- 159289 ||||||| |||||| || || |||||||| ||| | | | | || ||| | Sbjct 86693 TGCTTTTGTTGCTGAGTAAGGGTTTGTTGG---AAGAAGCTGAGAAGCCTCATGGTTACC 86749 Query 159290 AAGGTTC--ATCTGTTTTTGATTCACCGTATACTTCATCTGTACTAAAATGTATAAA--- 159344 || || |||| || | |||||| ||||||||||| || |||| ||| || || Sbjct 86750 AACATTAGTATCTAACTTAGTTTCACCATATACTTCATCAGTGCTAACATGGATGAATCT 86809 Query 159345 TTCAACATTTGGTATGTGACGCCTACAGACTTCAACGAGTGTATGTGTACCATATGTATT 159404 || |||| |||| ||||| |||||| |||||| || ||||||||||||| |||| Sbjct 86810 TTTAACA--TGGTCAGTGAC-CCTACAACCTTCAAGAAGAACATGTGTACCATATATATT 86866 Query 159405 GTCTAAAGTAAACCCAAGAGGACTT-GTAAATGAATTGTCTACATGACTTTGTGCGGCAA 159463 || | || || | | ||| || ||| ||||| |||||||| ||||||| |||| Sbjct 86867 GTTGTAGGTGAATTCCA-TGGAGTTACCAAAGGAATTATCTACATGGGTTTGTGCAGCAA 86925 Query 159464 AGTG 159467 |||| Sbjct 86926 AGTG 86929 >seq1 Length=36457581 Score = 98.7 bits (108), Expect = 1e-15 Identities = 160/228 (70%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 75129 GGGACTATGATTTTGGTTACTTTGGTCTCAAAACCCTTGAGAAGAGCTATCT-TCAACGG 75187 |||||| ||| | || |||||||||| ||||||||||||||| | ||| || | | || Sbjct 33689657 GGGACTTTGACTATGATTACTTTGGTTTCAAAACCCTTGAGAGGTCCTACCTGTTGAAGG 33689598 Query 75188 CTCGATGGCATCCTCATGGAAACCCCACAGTACATGTTCATGCGGGTCGCAATCGGCATC 75247 | || || | | | |||| || ||| ||||||| ||| |||| | | || || Sbjct 33689597 TT-GAAGGAAAAGTTGTTGAAAGACCTCAGCACATGTTGATGAGGGTTTCTGTTGGAATT 33689539 Query 75248 CACGGGGAAGACATTGATTCTGTCTTGGAGACATACGACAAGATGTCCCAAGGTATGTTC 75307 ||| ||| ||||||||||||| | | || ||| || ||||| || | |||| Sbjct 33689538 CACAAGGATGACATTGATTCTGCTGTCAAAACTTACCACCTAATGTCTCAGAGATGGTTC 33689479 Query 75308 ATTCACGCAACACCAACCCTCTTCAATGCTGGTACACCAAGACCGCAG 75355 | ||| ||| | || || || |||||||| || ||||| || || ||| Sbjct 33689478 ACTCATGCATCTCCTACTCTATTCAATGCCGGAACACCTAGGCCTCAG 33689431 >seq11 Length=35963958 Score = 95.1 bits (104), Expect = 1e-14 Identities = 168/242 (69%), Gaps = 6/242 (2%) Strand=Plus/Plus Query 75129 GGGACTATGATTTTGGTTACTTTGGTCTCAAAACCCTTGAGAAGAGCTA--TCTTCAACG 75186 |||||| ||| | || |||||||||| ||||||||||||||| | ||| |||| || Sbjct 31406228 GGGACTTTGACTATGATTACTTTGGTTTCAAAACCCTTGAGAGGTCCTACCTCTTGAA-- 31406285 Query 75187 GCTCGATGGCATCCTCATGGAAACCCCACAGTACATGTTCATGCGGGTCGCAATCGGCAT 75246 | | || || | | |||| || ||| ||||||| ||| |||| | | || || Sbjct 31406286 GGTTGAAGGACAAGTTGTTGAAAGACCTCAGCACATGTTGATGAGGGTTTCTGTTGGAAT 31406345 Query 75247 CCACGGGGAAGACATTGATTCTGTCTTGGAGACATACGACAAGATGTCCCAAGGTATGTT 75306 ||| ||| |||| ||||||| | | |||||| | |||||| || | ||| Sbjct 31406346 TCACAAGGATAACATAGATTCTGCTGTCAAAACATACCATCTGATGTCACAGAGATGGTT 31406405 Query 75307 CATTCACGCAACACCAACCCTCTTCAATGCTGGTACACCAAGACCGCAGATGTCCAGTTG 75366 || ||| ||| | || || || |||||||| || ||||| || || ||| || | |||| Sbjct 31406406 CACTCATGCATCTCCTACTCTGTTCAATGCCGGGACACCTAGGCCTCAG--GTACGGTTG 31406463 Query 75367 CT 75368 || Sbjct 31406464 CT 31406465 >seq16 Length=20786881 Score = 91.5 bits (100), Expect = 2e-13 Identities = 277/422 (66%), Gaps = 12/422 (3%) Strand=Plus/Minus Query 175231 GAGATTGTGGATTTTCTCAAGCAACCCGAGAGATATTTTGGAAGTGGTGCCAAGATCCCC 175290 ||| | || || ||||| ||| | |||||||||| || || || || ||| Sbjct 9802259 GAGGTGGTCGAGTTTCTGAAGAAGCCCGAGAGATTCACTGCTGTCGGGGCTCGCATACCC 9802200 Query 175291 CGAGGCGCCCTTCTCGCGGGTAAGCCAGGTACGGGAAAGACCCTCCTCGCCCGAGCCATC 175350 ||| | ||||| | ||| ||||| || || ||||| || | || || || Sbjct 9802199 AAAGGAGTTCTTCTTGTTGGTCCTCCAGGAACTGGGAAGACGCTATTAGCGAAGGCTATT 9802140 Query 175351 GCGGGTGAATCAAATGTCCCATTCATC-CAGTGCTCTGCCGCAAACTTTGTGGAGATGTT 175409 || |||||| || |||||| || || || | ||| | | | ||||| |||||||| Sbjct 9802139 GCTGGTGAAGCAGGTGTCCCTTTTTTCTCAAT-CTCGGGTTCTGAGTTTGTTGAGATGTT 9802081 Query 175410 TGTTGGTGTGGGTGCCAAAAGGGTTCGCGATCTCTTTGAAATCGCCCGCGAAAATCAACC 175469 ||||||||| ||||| | || || ||| | || | | ||| || ||| || Sbjct 9802080 TGTTGGTGTTGGTGCTTCTCGAGTCCGTGATTTATTCAAGAAGGCCAAAGAGAATTCTCC 9802021 Query 175470 ATGTATTGTCTTCATTGATGAGATTGATGCGGTGGGCAAGCAACGCAGCGCTGG--TGGT 175527 || ||||| || ||||||| ||||| || || || | |||| | | |||| ||| Sbjct 9802020 TTGCATTGTTTTTGTTGATGAAATTGACGCTGTTGGAAGGCAAAGAGGTACTGGAATGGG 9801961 Query 175528 ATGCCAGCAAATGACGAGAGAGAACAAACAATTAATCAACTACTCACCGAGATGGATGGC 175587 | || || || || ||||||||||| |||| ||||| | || || |||||||| Sbjct 9801960 TGG--AGGGAACGATGAAAGAGAACAAACCCTTAACCAACTTTTGACAGAAATGGATGGG 9801903 Query 175588 TTTGACAATGAGAC---TGGCATTGTGGTTATTGCGGCCACTAATCGCGTGGATATCCTT 175644 ||||| | | || || ||||||| ||||| || ||||| | | || || ||| Sbjct 9801902 TTTGAGGGTAATACCGGTGTCATTGTG---ATTGCAGCAACTAACAGAGCTGACATTCTT 9801846 Query 175645 GA 175646 || Sbjct 9801845 GA 9801844 >seq7 Length=19782170 Score = 89.7 bits (98), Expect = 6e-13 Identities = 241/367 (66%), Gaps = 14/367 (4%) Strand=Plus/Plus Query 175231 GAGATTGTGGATTTTCTCAAGCAACCCGAGAGATATTTTGGAAGTGGTGCCAAGATCCCC 175290 ||| | || |||||||| ||| | || || | ||| || ||||| ||||| || Sbjct 7715884 GAGGTGGTTGATTTTCTGAAGAATCCTGATAAGTATACTGCCTTGGGTGCTAAGATTCCG 7715943 Query 175291 CGAGGCGCCCTTCTCGCGGGTAAGCCAGGTACGGGAAAGACCCTCCTCGCCCGAGCCATC 175350 ||| |||||| | ||| || || || || ||||| || | || |||| | Sbjct 7715944 AAAGGGTGCCTTCTGGTGGGACCACCGGGCACAGGGAAGACACTTTTGGCGAGAGCGGTA 7716003 Query 175351 GCGGGTGAATCAAATGTCCCATTCAT--CCAGTGCTCTGCCGCAAACTTTGTGGAGATGT 175408 || || || | || || ||| | || |||| || || | ||||||||| ||| Sbjct 7716004 GCTGGGGAGGCTGGCGTGCCGTTCTTTTCCTGTGCA--GCTTCAGAATTTGTGGAGCTGT 7716061 Query 175409 TTGTTGGTGTGGGTGCCAAAAGGGTTCGCGATCTCTTTGAAATCGCCCGCGAAAATCAA- 175467 |||| || |||||||| ||||| | ||| | || || | || ||| || | Sbjct 7716062 TTGTCGGGGTGGGTGCTTCGAGGGTGAGGGATTTGTTCGAGAAGGC-----AAAGTCGAA 7716116 Query 175468 ----CCATGTATTGTCTTCATTGATGAGATTGATGCGGTGGGCAAGCAACGCAGCGCTGG 175523 || || ||||| || || ||||||||||||||||| || | ||| | | ||||| Sbjct 7716117 AGCGCCTTGCATTGTGTTTATCGATGAGATTGATGCGGTTGGGAGGCAGAGAGGGGCTGG 7716176 Query 175524 TGGTATGCCAGCAAATGACGAGAGAGAACAAACAATTAATCAACTACTCACCGAGATGGA 175583 | | || ||||| ||||| ||||| || |||||||| || | || |||||||| Sbjct 7716177 TATGGGGGGAGGGAATGATGAGAGGGAACAGACTATTAATCAGCTGTTGACTGAGATGGA 7716236 Query 175584 TGGCTTT 175590 || ||| Sbjct 7716237 CGGGTTT 7716243 >seq18 Length=16588007 Score = 87.8 bits (96), Expect = 2e-12 Identities = 93/123 (76%), Gaps = 0/123 (0%) Strand=Plus/Plus Query 177573 CACAGAGTGTGTCTCCCCCGTCGCGACAACATATTCATCAGCCTCTTCTTGTTGAAGCAT 177632 ||| | ||||| |||| | || || |||||||| |||||||| | |||||| || ||||| Sbjct 15825403 CACTGTGTGTGACTCCTCTGTTGCAACAACATAATCATCAGCTTTTTCTTGCTGCAGCAT 15825462 Query 177633 GAGCCACATGGCTTCAACATAGTCCTTGGCATGACCCCAGTCTCTGGCAGCGTTGAGGTT 177692 | |||||| ||||||||||| ||| || |||||| || || | ||| | ||||| Sbjct 15825463 CAACCACATAGCTTCAACATAATCCCCAGCGAAACCCCAATCCCTTGAAGCCTGAAGGTT 15825522 Query 177693 ACC 177695 || Sbjct 15825523 CCC 15825525 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 596468384510240