Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lupinus_20angustifolius_20[refseq_20GCF_5F001865875.1_202016-11-16] 13,573 sequences; 609,203,021 total letters Query= NC_020855.1 Length=192497 Score E Sequences producing significant alignments: (Bits) Value seq664 497 1e-135 seq5 145 9e-30 seq19 141 1e-28 seq17 122 1e-22 seq3 122 1e-22 seq1 95.1 1e-14 seq9 91.5 2e-13 >seq664 Length=18451 Score = 497 bits (550), Expect = 1e-135 Identities = 707/990 (71%), Gaps = 6/990 (1%) Strand=Plus/Plus Query 7878 AGTCTCAGCAGATGCTAAGTCTAATGGGAAGTTGTGTGCATTTCTTTCATGCATAACTTC 7937 || ||| || | |||| ||||| |||||||| || ||||| | ||||||||||||||| Sbjct 511 AGCCTCGGCCGCAGCTAGGTCTAGAGGGAAGTTATGAGCATTACGTTCATGCATAACTTC 570 Query 7938 CATACCTAAGTTTGCTCTGTT--TAATACGTCACCCCATGTAGGAATGATTTTACCATTA 7995 |||||| | ||| |||| ||| ||||| ||| |||| ||| ||| | ||| | | Sbjct 571 CATACCAAGGTTAGCTCGGTTAATAATA--TCAGCCCAGGTATTAATTACACGACCTTGA 628 Query 7996 ACATCAACAACTGATTGGTTAAAGTTAAATCCGTTAAGGTTAAATGCCATTGTGCAAATA 8055 |||||| || |||||||| || || || || || | || || ||||| || | ||| Sbjct 629 CTATCAACTACGGATTGGTTGAAATTGAAACCATTTAAATTGAAAGCCATGGTACTGATA 688 Query 8056 CCCATAGAAGTTAACCAAACACATACAACTGGGAATGTAGCGAGGAAGAAGTGAAGACTT 8115 || | | || ||||| | || ||| || || | | ||| || ||||| || | | Sbjct 689 CCTAACGCGGTAAACCAGATACCTACTACAGGCCAAGCAGCTAGAAAGAAATGTAAAGAA 748 Query 8116 CTACTGTTGTT-AAACGATGCATACTGGAAGATTAATCTACCAAAGTATCCATGAGCAGC 8174 | | || || |||| | ||||| |||||||| |||| ||||| || ||||||||||| Sbjct 749 CGAGAATTATTGAAACTA-GCATATTGGAAGATCAATCGGCCAAAATAACCATGAGCAGC 807 Query 8175 AACAATATTATAGGTCTCTTCTTCTTGACCAAACTTATAACCATAGTTCTGAGACTCTTC 8234 |||||||||||||| ||||| ||||||||||| | ||||| | ||| ||| || | Sbjct 808 TACAATATTATAGGTTTCTTCCTCTTGACCAAATCTGTAACCTTCGTTAGCAGATTCATT 867 Query 8235 TTCAGTTGTCTCTCTGATTAGAGAAGATGTAACTAAAGAACCGTGCATAGCACTGAAGAG 8294 ||| || || || ||||| | | ||| || || || |||||||||||||||||||| || Sbjct 868 TTCTGTGGTTTCCCTGATCAAACTAGAAGTTACCAAGGAACCGTGCATAGCACTGAATAG 927 Query 8295 TGATCCACCGAACATACCTGCTACCCCTGCCATATGGAAAGGATGCATAAGAATGTTATG 8354 || || ||||| | ||| ||||| ||| ||| || || |||||||||||||| || || Sbjct 928 GGAGCCGCCGAATACACCAGCTACGCCTAACATGTGAAATGGATGCATAAGAATATTGTG 987 Query 8355 CTCTGCTTGGAATACGAACATGAAGTTAAACGTACCAGAAATACCTAGAGGCATTCCATC 8414 ||| || || ||||| | ||| ||||| || |||||||| || ||||||||||| ||||| Sbjct 988 CTCAGCCTGAAATACAATCATAAAGTTGAAAGTACCAGAGATTCCTAGAGGCATACCATC 1047 Query 8415 AGAGAATGAACCCTGACCAAATGGATATACTAAGAACACTGCGAAAGCAGCAGATACTGG 8474 || || || ||||| | |||||| | ||||| || || |||||| | || || Sbjct 1048 CGAAAAGCTTCCTTGACCGATTGGATAAATCAAGAAAACAGCAGTAGCAGCTGCAACAGG 1107 Query 8475 AGCACTATATGCTACACAGATCCATGGTCTCATACCTAAGCGGTATGATAACTCCCACTG 8534 ||| |||||| || ||||| || | |||||| | || | | ||||||| Sbjct 1108 AGCTGAATATGCAACCGCAATCCAAGGGCGCATACCCAGACGAAAACTAAGTTCCCACTC 1167 Query 8535 TCTACCCATGTAAGCAGAAATTCCAATAAGGAAGTGGAAGATAACCAACTGATATGGACC 8594 | |||||||||| || | |||| | |||||| | | || | | ||| ||||| Sbjct 1168 ACGACCCATGTAACAAGCTACACCAAGTAAGAAGTGTAGAACAATTAGTTCATAAGGACC 1227 Query 8595 TCCGTTATACAACCACTCATCTAATGTGGCAGCTTCCCAAATGGGATAGAAGTGTAATCC 8654 || || || ||||| ||||| | | || |||||||| || || || ||||| || || Sbjct 1228 GCCATTGTATAACCATTCATCAACGGATGCCGCTTCCCATATCGGGTAAAAGTGCAAACC 1287 Query 8655 AATAGCGTTGGAAGATGGAACGACAGCACCAGAGATGATGTTGTTTCCATACATGAATGA 8714 ||||| |||| |||| | |||||| || || || |||||||| || | | || Sbjct 1288 GATAGCCGCAGAAGTAGGAATAATAGCACCCGAAATAATATTGTTTCCGTAAAGTAGAGA 1347 Query 8715 ACCTGCAACAGGTTCACGAATACCGTCGATATCGACAGGTGGAGCAGCAATAAATGCCAC 8774 || | |||||| ||||||||||| || ||||| || || || |||||||| || || | Sbjct 1348 TCCAGAAACAGGCTCACGAATACCATCAATATCTACTGGAGGGGCAGCAATGAAAGCGAT 1407 Query 8775 GATAAAGCAAGTAGCAGCAGCTAACAAGCAAGGAATCATTAGAACTCCAAACCAACCGAC 8834 ||||| || || || | || ||| ||| ||||| | ||| |||||||| |||| Sbjct 1408 AATAAATACAGAAGTTGCGGTCAATAAGGTAGGGATCATCAAAACACCAAACCATCCGAT 1467 Query 8835 ATAAAGTCTGTTGTTTGTACTTGTAACCCA 8864 ||||| | ||| | || || || | ||| Sbjct 1468 GTAAAGACGGTTTTCAGTGCTGGTTATCCA 1497 >seq5 Length=26376911 Score = 145 bits (160), Expect = 9e-30 Identities = 224/320 (70%), Gaps = 0/320 (0%) Strand=Plus/Plus Query 8527 TCCCACTGTCTACCCATGTAAGCAGAAATTCCAATAAGGAAGTGGAAGATAACCAACTGA 8586 ||||||| | |||||||||| || | |||| | |||||| | | || | | | Sbjct 10577033 TCCCACTCACGACCCATGTAACAAGCTACACCAAGTAAGAAGTGTAGAACAATTAGTTCA 10577092 Query 8587 TATGGACCTCCGTTATACAACCACTCATCTAATGTGGCAGCTTCCCAAATGGGATAGAAG 8646 || ||||| || || || ||||| ||||| | | || |||||||| || || || ||| Sbjct 10577093 TAAGGACCGCCATTGTATAACCATTCATCAACGGATGCCGCTTCCCATATCGGGTAAAAG 10577152 Query 8647 TGTAATCCAATAGCGTTGGAAGATGGAACGACAGCACCAGAGATGATGTTGTTTCCATAC 8706 || || || ||||| |||| |||| | |||||| || || || |||||||| || Sbjct 10577153 TGCAAACCGATAGCCGCAGAAGTAGGAATAATAGCACCCGAAATAATATTGTTTCCGTAA 10577212 Query 8707 ATGAATGAACCTGCAACAGGTTCACGAATACCGTCGATATCGACAGGTGGAGCAGCAATA 8766 | | || || | |||||| ||||||||||| || ||||| || || | |||||||| Sbjct 10577213 AGTAGAGATCCAGAAACAGGCTCACGAATACCATCAATATCTACTGGAAGGGCAGCAATG 10577272 Query 8767 AATGCCACGATAAAGCAAGTAGCAGCAGCTAACAAGCAAGGAATCATTAGAACTCCAAAC 8826 || || | ||||| || || || | || ||| ||| ||||| | ||| |||||| Sbjct 10577273 AAAGCGATAATAAATACAGAAGTTGCGGTCAATAAGGTAGGGATCATCAAAACACCAAAC 10577332 Query 8827 CAACCGACATAAAGTCTGTT 8846 || |||| ||||| | ||| Sbjct 10577333 CATCCGATGTAAAGACGGTT 10577352 Score = 82.4 bits (90), Expect = 9e-11 Identities = 143/206 (69%), Gaps = 4/206 (2%) Strand=Plus/Plus Query 7878 AGTCTCAGCAGATGCTAAGTCTAATGGGAAGTTGTGTGCATTTCTTTCATGCATAACTTC 7937 || ||| || | |||| ||||| |||||||| || ||||| ||||||||||||||| Sbjct 10060233 AGCCTCGGCCGCAGCTAGGTCTAGAGGGAAGTTATGAGCATTATGTTCATGCATAACTTC 10060292 Query 7938 CATACCTAAGTTTGCTCTGTT--TAATACGTCACCCCATGTAGGAATGATTTTACCATTA 7995 |||||| | ||| |||| ||| ||||| | ||| ||| ||| | ||| | | Sbjct 10060293 CATACCAAGGTTAGCTCGGTTAATAATA--ATAGTCCAGGTATTAATTACACGACCTTGA 10060350 Query 7996 ACATCAACAACTGATTGGTTAAAGTTAAATCCGTTAAGGTTAAATGCCATTGTGCAAATA 8055 |||||| | |||||||| || || || || || | || || | ||| || | |||| Sbjct 10060351 CTATCAACTATGGATTGGTTGAAATTGAAACCATTTAAATTGAAAGTCATAGTACTAATA 10060410 Query 8056 CCCATAGAAGTTAACCAAACACATAC 8081 || | | | ||||| |||| ||| Sbjct 10060411 CCTAATGCGATAAACCAGACACCTAC 10060436 >seq19 Length=18159812 Score = 141 bits (156), Expect = 1e-28 Identities = 214/300 (71%), Gaps = 6/300 (2%) Strand=Plus/Minus Query 7878 AGTCTCAGCAGATGCTAAGTCTAATGGGAAGTTGTGTGCATTTCTTTCATGCATAACTTC 7937 || ||| || | |||| ||||| |||||||| || ||||| | ||||||||||||||| Sbjct 6185731 AGCCTCGGCCGCAGCTAGGTCTAGAGGGAAGTTATGAGCATTACGTTCATGCATAACTTC 6185672 Query 7938 CATACCTAAGTTTGCTCTGTT--TAATACGTCACCCCATGTAGGAATGATTTTACCATTA 7995 |||||| | ||| |||| ||| ||||| ||| |||| ||| ||| | ||| | | Sbjct 6185671 CATACCAAGGTTAGCTCGGTTAATAATA--TCAGCCCAGGTATTAATTACACGACCTTGA 6185614 Query 7996 ACATCAACAACTGATTGGTTAAAGTTAAATCCGTTAAGGTTAAATGCCATTGTGCAAATA 8055 |||||| || |||||||| || || || || || | || || ||||| || | ||| Sbjct 6185613 CTATCAACTACGGATTGGTTGAAATTGAAACCATTTAAATTGAAAGCCATGGTACTGATA 6185554 Query 8056 CCCATAGAAGTTAACCAAACACATACAACTGGGAATGTAGCGAGGAAGAAGTGAAGACTT 8115 || | | || ||||| | || ||| || || | | ||| || ||||| || | | Sbjct 6185553 CCTAACGCGGTAAACCAGATACCTACTACAGGCCAAGCAGCTAGAAAGAAATGTAAAGAA 6185494 Query 8116 CTACTGTTGTT-AAACGATGCATACTGGAAGATTAATCTACCAAAGTATCCATGAGCAGC 8174 | | || || |||| | ||||| |||||||| |||| ||||| || ||||||||||| Sbjct 6185493 CGAGAATTATTGAAACTA-GCATATTGGAAGATCAATCGGCCAAAATAACCATGAGCAGC 6185435 >seq17 Length=21299880 Score = 122 bits (134), Expect = 1e-22 Identities = 131/171 (77%), Gaps = 2/171 (1%) Strand=Plus/Plus Query 8127 AAACGATGCATACTGGAAGATTAATCTACCAAAGTATCCATGAGCAGCAACAATATTATA 8186 |||| || |||| |||||||| |||| ||||| || |||| |||||| ||||||||||| Sbjct 21194117 AAACTAT-CATATTGGAAGATCAATCAGCCAAAATAACCATTAGCAGCTACAATATTATA 21194175 Query 8187 GGTCTCTTCTTCTTGACCAAACTTATAACCATAGTTCTGAGACTCTTCTTCAGTTGTCTC 8246 | | ||||| ||||||||||| | ||||| | ||| | | || | ||| || || || Sbjct 21194176 GATTTCTTCCTCTTGACCAAATCTGTAACCTTCGTTAGCAAATTCATTTTCTGTGGTTTC 21194235 Query 8247 TCTGATTAGAGAAGATGTAACTAAAGAACCGTGCATAGCACTGAAGAGTGA 8297 ||||| | | ||| || || || ||||||||||||||||||| || || Sbjct 21194236 CCTGATCAAACTAGAAGT-ACCAAGAAACCGTGCATAGCACTGAATAGGGA 21194285 Score = 89.7 bits (98), Expect = 6e-13 Identities = 82/104 (79%), Gaps = 0/104 (0%) Strand=Plus/Minus Query 8281 ATAGCACTGAAGAGTGATCCACCGAACATACCTGCTACCCCTGCCATATGGAAAGGATGC 8340 ||||||||||| || || || ||||| | ||| ||||| ||| ||| || || |||||| Sbjct 19911066 ATAGCACTGAATAGGGAGCCGCCGAATACACCAGCTACGCCTAACATGTGAAATGGATGC 19911007 Query 8341 ATAAGAATGTTATGCTCTGCTTGGAATACGAACATGAAGTTAAA 8384 |||||||| || ||||| || || ||||| | ||| ||||| || Sbjct 19911006 ATAAGAATATTGTGCTCAGCCTGAAATACAATCATAAAGTTGAA 19910963 >seq3 Length=30153019 Score = 122 bits (134), Expect = 1e-22 Identities = 172/242 (71%), Gaps = 0/242 (0%) Strand=Plus/Minus Query 8623 GCAGCTTCCCAAATGGGATAGAAGTGTAATCCAATAGCGTTGGAAGATGGAACGACAGCA 8682 || |||||||| || || || ||||| || || ||||| |||| |||| | |||| Sbjct 19659976 GCCGCTTCCCATATCGGGTAAAAGTGCAAACCGATAGCCGCAGAAGTAGGAATAATAGCA 19659917 Query 8683 CCAGAGATGATGTTGTTTCCATACATGAATGAACCTGCAACAGGTTCACGAATACCGTCG 8742 || || || || |||||||| || | | || || | |||||| ||||||||||| || Sbjct 19659916 CCCGAAATAATATTGTTTCCGTAAAGTAGAGATCCAGAAACAGGCTCACGAATACCATCA 19659857 Query 8743 ATATCGACAGGTGGAGCAGCAATAAATGCCACGATAAAGCAAGTAGCAGCAGCTAACAAG 8802 ||||| || || || |||||||| || || | ||||| || || || | || ||| Sbjct 19659856 ATATCTACTGGAGGGGCAGCAATGAAAGCGATAATAAATACAGAAGTTGCGGTCAATAAG 19659797 Query 8803 CAAGGAATCATTAGAACTCCAAACCAACCGACATAAAGTCTGTTGTTTGTACTTGTAACC 8862 ||| ||||| | ||| |||||||| |||| ||||| | ||| | || || || | | Sbjct 19659796 GTAGGGATCATCAAAACACCAAACCATCCGATGTAAAGACGGTTTTCAGTGCTGGTTATC 19659737 Query 8863 CA 8864 || Sbjct 19659736 CA 19659735 >seq1 Length=36457581 Score = 95.1 bits (104), Expect = 1e-14 Identities = 151/217 (70%), Gaps = 0/217 (0%) Strand=Plus/Minus Query 7892 CTAAGTCTAATGGGAAGTTGTGTGCATTTCTTTCATGCATAACTTCCATACCTAAGTTTG 7951 ||| ||||| |||||||| || ||||| | |||||||||||||||||| || | ||| | Sbjct 19599591 CTAGGTCTAGAGGGAAGTTATGAGCATTACGTTCATGCATAACTTCCATGCCAAGGTTAG 19599532 Query 7952 CTCTGTTTAATACGTCACCCCATGTAGGAATGATTTTACCATTAACATCAACAACTGATT 8011 ||| ||||| | ||| ||||| || ||| | ||| | | |||||| | |||| Sbjct 19599531 CTCGGTTTATAATATCAGCCCATATATTAATTACACGACCTTGACTATCAACTATGGATT 19599472 Query 8012 GGTTAAAGTTAAATCCGTTAAGGTTAAATGCCATTGTGCAAATACCCATAGAAGTTAACC 8071 |||| || || || || || | || || ||||| || | |||| | | || |||| Sbjct 19599471 GGTTGAAATTGAAACCATTTAAATTGAAAGCCATGGTACTGGTACCTAACGCGGTAAACC 19599412 Query 8072 AAACACATACAACTGGGAATGTAGCGAGGAAGAAGTG 8108 | | || ||| || || | | ||| | ||||| || Sbjct 19599411 AGATACCTACTACAGGCCAAGCAGCTAAAAAGAAATG 19599375 >seq9 Length=21753712 Score = 91.5 bits (100), Expect = 2e-13 Identities = 142/200 (71%), Gaps = 5/200 (3%) Strand=Plus/Plus Query 7891 GCTAAGTCTAATGGGAAGTTGTGTGCATTTCTTTCATGCATAACTTCCATACCTAAGTTT 7950 |||| ||||| ||||||| || ||||| | |||||| |||||||||||||| | ||| Sbjct 18376389 GCTAGGTCTAGATGGAAGTTATGAGCATTACGTTCATGTATAACTTCCATACCAAGGTTA 18376448 Query 7951 GCTCTGTT--TAATACGTCACCCCATGTAGGAATGATTTTACCATTAACATCAACAACTG 8008 |||| ||| ||||| ||| | || || ||| | ||| | | |||||| || Sbjct 18376449 GCTCGGTTAATAATA--TCAGCTCAGATATTAATTACACGACCTTGACTATCAACTACAT 18376506 Query 8009 ATTGGTTAAAGTTAAATCCGTTAAGGTTAAATGCCATTGTGCAAATACCCATAGAAGTT- 8067 ||||||| || || || || || | ||| || ||||| |||| ||||| | | ||| Sbjct 18376507 ATTGGTTGAAATTGAAACCATTTAAGTTGAAAGCCATGGTGCTGATACCTAATGCGGTTA 18376566 Query 8068 AACCAAACACATACAACTGG 8087 ||||| | || ||| || || Sbjct 18376567 AACCAGATACCTACTACAGG 18376586 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 615757911245560