Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lupinus_20angustifolius_20[refseq_20GCF_5F001865875.1_202016-11-16] 13,573 sequences; 609,203,021 total letters Query= NC_020867.1 Length=44892 Score E Sequences producing significant alignments: (Bits) Value seq664 533 4e-147 seq19 196 1e-45 seq5 170 5e-38 seq3 149 2e-31 seq1 145 2e-30 seq8 120 9e-23 seq3662 89.7 1e-13 seq6 87.8 5e-13 >seq664 Length=18451 Score = 533 bits (590), Expect = 4e-147 Identities = 720/995 (72%), Gaps = 6/995 (1%) Strand=Plus/Minus Query 42280 TGGGATCAGTTTTGTAACTGGGTGACTTCGACTAACAACCGTCTTTATGTTGGGTGGTTT 42339 |||| || || ||||||||| | || ||| | ||||||||||| | || |||||| Sbjct 1515 TGGGGTCGCTTCTGTAACTGGATAACCAGCACTGAAAACCGTCTTTACATCGGATGGTTT 1456 Query 42340 GGTGTGCTGATGATTCCCTGTCTGCTCG-CTGCTACCACCTGT-TTTATTGTCGCTTTCA 42397 ||||| ||||||| |||| || | | | || || | ||| |||||| ||||||||| Sbjct 1455 GGTGTTTTGATGAT-CCCTACCTTATTGACCGCAACTTC-TGTATTTATTATCGCTTTCA 1398 Query 42398 TTGCTGCCCCTCCGGTAGACATTGATGGCATTCGTGAACCTGTCTCTGGCTCTCTTCTGT 42457 ||||||||||||| ||||| |||||||| |||||||| ||||| ||||| ||||| || | Sbjct 1397 TTGCTGCCCCTCCAGTAGATATTGATGGTATTCGTGAGCCTGTTTCTGGATCTCTACTTT 1338 Query 42458 ATGGCAACAACATCATCTCTGGTGCCGTCGTGCCTAGCAGTAACGCAATTGGACTACATT 42517 | || ||||| || || || ||||| | | |||| | || || || | || | Sbjct 1337 ACGGAAACAATATTATTTCGGGTGCTATTATTCCTACTTCTGCGGCTATCGGTTTGCACT 1278 Query 42518 TGTATTCGATCTGGGAAGCCAATACCCTTGACGAATGGCTCTACAATGGCGGACCTTATC 42577 | || |||| |||||||| || |||| |||||| | ||||||||||| |||||| Sbjct 1277 TTTACCCGATATGGGAAGCGGCATCCGTTGATGAATGGTTATACAATGGCGGTCCTTATG 1218 Query 42578 AGCTCGTCGTGTTCCACTTCCTTATCGGTATCTTCTCTTACTTGGGACGCGAATGGGAAC 42637 | || | || | |||||| | | ||| | | |||| |||| || || ||||||| Sbjct 1217 AACTAATTGTTCTACACTTCTTACTTGGTGTAGCTTGTTACATGGGTCGTGAGTGGGAAC 1158 Query 42638 TTTCGTACCGACTTGGGATGAGGCCCTGGATCTTTGTTGCTTACTCTGCCCCTGTGGCTG 42697 || | || || || ||| | || ||||| ||||| || || || ||||| || | Sbjct 1157 TTAGTTTTCGTCTGGGTATGCGCCCTTGGATTGCGGTTGCATATTCAGCTCCTGTTGCAG 1098 Query 42698 CAGCGACTGCAGTCTTCCTTGTCTATCCATTTGGGCAAGGTTCTTTTTCAGATGGAATGC 42757 | || ||||| || ||| | | |||||| | || ||||| ||||| ||||| |||| Sbjct 1097 CTGCTACTGCTGTTTTCTTGATTTATCCAATCGGTCAAGGAAGCTTTTCGGATGGTATGC 1038 Query 42758 CTCTTGGCATTTCCGGTACGTTCAACTTCATGTTGGTCTTCCAGGCTGAACATAACATTC 42817 |||| || || || ||||| |||||||| ||| | || || |||||||| || || |||| Sbjct 1037 CTCTAGGAATCTCTGGTACTTTCAACTTTATGATTGTATTTCAGGCTGAGCACAATATTC 978 Query 42818 TTATGCATCCTTTCCATATGCTTGGTGTTGCCGGCGTATTTGGTGGGTCGTTGTTCTCAG 42877 |||||||||| || || ||| | || || || || ||||| || || || | ||| | Sbjct 977 TTATGCATCCATTTCACATGTTAGGCGTAGCTGGTGTATTCGGCGGCTCCCTATTCAGTG 918 Query 42878 CTATGCATGGTAGTCTTGTCACCTCTTCTCTTGTGCGTGAAACGACTGAAAACGAAAGCC 42937 ||||||| ||| | || || ||| | | | | ||||| || ||||| ||| Sbjct 917 CTATGCACGGTTCCTTGGTAACTTCTAGTTTGATCAGGGAAACCACAGAAAATGAATCTG 858 Query 42938 AAAATTATGGCTACAAGTTCGGTCAAGAGGAGGAGACTTATAACATTGTTGCAGCGCATG 42997 || | || |||| || ||||||||||| || || ||||| ||||| || || |||| Sbjct 857 CTAACGAAGGTTACAGATTTGGTCAAGAGGAAGAAACCTATAATATTGTAGCTGCTCATG 798 Query 42998 GTTACTTTGGACGGCTTATCTTCCAATATGCGTCGTTT-AATAATAGTCGCTCTTTGCAC 43056 |||| ||||| || | |||||||||||||| | |||| |||||| ||| ||||| || Sbjct 797 GTTATTTTGGCCGATTGATCTTCCAATATGC-TAGTTTCAATAATTCTCGTTCTTTACAT 739 Query 43057 TTCTTTCTTGCCGCTTGGCCCGTTGTGGGGATTTGGTTCACTTCTCTTGGCGTCAGTACT 43116 |||||||| || |||||||| || || || || ||||| || | | || ||||||| Sbjct 738 TTCTTTCTAGCTGCTTGGCCTGTAGTAGGTATCTGGTTTACCGCGTTAGGTATCAGTACC 679 Query 43117 ATGGCGTTTAACTTGAATGGTTTTAACTTTAACCAATCACTTGTTGATAATCAGAATCAT 43176 ||||| || || || |||||||| || || |||||||| | ||||||| ||| || | Sbjct 678 ATGGCTTTCAATTTAAATGGTTTCAATTTCAACCAATCCGTAGTTGATAGTCAAGGTCGT 619 Query 43177 GTCATCCCTACTTGGGCTGATATTTTGAATCGTGCCAACCTTGGCTTTGAGGTGATGCAC 43236 || || ||| |||||||||||| | || || || |||||||| | || || ||||| Sbjct 618 GTAATTAATACCTGGGCTGATATTATTAACCGAGCTAACCTTGGTATGGAAGTTATGCAT 559 Query 43237 GAGCGGAATGCACATAACTTCCCGCTTGATCTTGC 43271 || || ||||| ||||||||||| || || || || Sbjct 558 GAACGTAATGCTCATAACTTCCCTCTAGACCTAGC 524 >seq19 Length=18159812 Score = 196 bits (216), Expect = 1e-45 Identities = 216/285 (76%), Gaps = 2/285 (1%) Strand=Plus/Plus Query 42988 GCAGCGCATGGTTACTTTGGACGGCTTATCTTCCAATATGCGTCGTTT-AATAATAGTCG 43046 || || |||||||| ||||| || | |||||||||||||| | |||| |||||| ||| Sbjct 6185435 GCTGCTCATGGTTATTTTGGCCGATTGATCTTCCAATATGC-TAGTTTCAATAATTCTCG 6185493 Query 43047 CTCTTTGCACTTCTTTCTTGCCGCTTGGCCCGTTGTGGGGATTTGGTTCACTTCTCTTGG 43106 ||||| || |||||||| || |||||||| || || || || ||||| || | | || Sbjct 6185494 TTCTTTACATTTCTTTCTAGCTGCTTGGCCTGTAGTAGGTATCTGGTTTACCGCGTTAGG 6185553 Query 43107 CGTCAGTACTATGGCGTTTAACTTGAATGGTTTTAACTTTAACCAATCACTTGTTGATAA 43166 ||||||| ||||| || || || |||||||| || || |||||||| | ||||||| Sbjct 6185554 TATCAGTACCATGGCTTTCAATTTAAATGGTTTCAATTTCAACCAATCCGTAGTTGATAG 6185613 Query 43167 TCAGAATCATGTCATCCCTACTTGGGCTGATATTTTGAATCGTGCCAACCTTGGCTTTGA 43226 ||| || ||| || ||| |||||||||||| | || || || |||||||| | || Sbjct 6185614 TCAAGGTCGTGTAATTAATACCTGGGCTGATATTATTAACCGAGCTAACCTTGGTATGGA 6185673 Query 43227 GGTGATGCACGAGCGGAATGCACATAACTTCCCGCTTGATCTTGC 43271 || ||||| || || ||||| ||||||||||| || || || || Sbjct 6185674 AGTTATGCATGAACGTAATGCTCATAACTTCCCTCTAGACCTAGC 6185718 >seq5 Length=26376911 Score = 170 bits (188), Expect = 5e-38 Identities = 251/350 (72%), Gaps = 4/350 (1%) Strand=Plus/Minus Query 42289 TTTTGTAACTGGGTGACTTCGACTAACAACCGTCTTTATGTTGGGTGGTTTGGTGTGCTG 42348 || ||||||||| | | ||| | ||||||||||| | || ||||||||||| || Sbjct 10577379 TTCTGTAACTGGATAATCAGCACTGAAAACCGTCTTTACATCGGATGGTTTGGTGTTTTG 10577320 Query 42349 ATGATTCCCTGTCTGCTCG-CTGCTACCACCTGT-TTTATTGTCGCTTTCATTGCTGCCC 42406 ||||| |||| || | | | || || | ||| |||||| |||||||||||||||||| Sbjct 10577319 ATGAT-CCCTACCTTATTGACCGCAACTTC-TGTATTTATTATCGCTTTCATTGCTGCCC 10577262 Query 42407 CTCCGGTAGACATTGATGGCATTCGTGAACCTGTCTCTGGCTCTCTTCTGTATGGCAACA 42466 ||| ||||| |||||||| |||||||| ||||| ||||| ||||| || || || |||| Sbjct 10577261 TTCCAGTAGATATTGATGGTATTCGTGAGCCTGTTTCTGGATCTCTACTTTACGGAAACA 10577202 Query 42467 ACATCATCTCTGGTGCCGTCGTGCCTAGCAGTAACGCAATTGGACTACATTTGTATTCGA 42526 | || || || ||||| | | |||| | || || || | || || || ||| Sbjct 10577201 ATATTATTTCGGGTGCTATTATTCCTACTTCTGCGGCTATCGGTTTGCACTTTTACCCGA 10577142 Query 42527 TCTGGGAAGCCAATACCCTTGACGAATGGCTCTACAATGGCGGACCTTATCAGCTCGTCG 42586 | |||||||| || |||| |||||| | ||||||||||| |||||| | || | | Sbjct 10577141 TATGGGAAGCGGCATCCGTTGATGAATGGTTATACAATGGCGGTCCTTATGAACTAATTG 10577082 Query 42587 TGTTCCACTTCCTTATCGGTATCTTCTCTTACTTGGGACGCGAATGGGAA 42636 | | |||||| | | ||| | | |||| |||| || || |||||| Sbjct 10577081 TTCTACACTTCTTACTTGGTGTAGCTTGTTACATGGGTCGTGAGTGGGAA 10577032 Score = 96.9 bits (106), Expect = 1e-15 Identities = 118/161 (73%), Gaps = 0/161 (0%) Strand=Plus/Minus Query 43111 AGTACTATGGCGTTTAACTTGAATGGTTTTAACTTTAACCAATCACTTGTTGATAATCAG 43170 ||||||||| | || || || |||||||| || || |||||||| | ||||||| ||| Sbjct 10060406 AGTACTATGACTTTCAATTTAAATGGTTTCAATTTCAACCAATCCATAGTTGATAGTCAA 10060347 Query 43171 AATCATGTCATCCCTACTTGGGCTGATATTTTGAATCGTGCCAACCTTGGCTTTGAGGTG 43230 || ||| || ||| ||| || |||| | || || || |||||||| | || || Sbjct 10060346 GGTCGTGTAATTAATACCTGGACTATTATTATTAACCGAGCTAACCTTGGTATGGAAGTT 10060287 Query 43231 ATGCACGAGCGGAATGCACATAACTTCCCGCTTGATCTTGC 43271 ||||| || | ||||| ||||||||||| || || || || Sbjct 10060286 ATGCATGAACATAATGCTCATAACTTCCCTCTAGACCTAGC 10060246 >seq3 Length=30153019 Score = 149 bits (164), Expect = 2e-31 Identities = 159/205 (78%), Gaps = 4/205 (2%) Strand=Plus/Plus Query 42280 TGGGATCAGTTTTGTAACTGGGTGACTTCGACTAACAACCGTCTTTATGTTGGGTGGTTT 42339 |||| || || ||||||||| | || ||| | ||||||||||| | || |||||| Sbjct 19659717 TGGGGTCGCTTCTGTAACTGGATAACCAGCACTGAAAACCGTCTTTACATCGGATGGTTT 19659776 Query 42340 GGTGTGCTGATGATTCCCTGTCTGCTCG-CTGCTACCACCTGT-TTTATTGTCGCTTTCA 42397 ||||| ||||||| |||| || | | | || || | ||| |||||| ||||||||| Sbjct 19659777 GGTGTTTTGATGAT-CCCTACCTTATTGACCGCAACTTC-TGTATTTATTATCGCTTTCA 19659834 Query 42398 TTGCTGCCCCTCCGGTAGACATTGATGGCATTCGTGAACCTGTCTCTGGCTCTCTTCTGT 42457 ||||||||||||| ||||| |||||||| |||||||| ||||| ||||| ||||| || | Sbjct 19659835 TTGCTGCCCCTCCAGTAGATATTGATGGTATTCGTGAGCCTGTTTCTGGATCTCTACTTT 19659894 Query 42458 ATGGCAACAACATCATCTCTGGTGC 42482 | || ||||| || || || ||||| Sbjct 19659895 ACGGAAACAATATTATTTCGGGTGC 19659919 >seq1 Length=36457581 Score = 145 bits (160), Expect = 2e-30 Identities = 167/225 (74%), Gaps = 0/225 (0%) Strand=Plus/Plus Query 43044 TCGCTCTTTGCACTTCTTTCTTGCCGCTTGGCCCGTTGTGGGGATTTGGTTCACTTCTCT 43103 ||| ||||| || |||||| | || |||||||| || || || || ||||| || | | Sbjct 19599365 TCGTTCTTTACATTTCTTTTTAGCTGCTTGGCCTGTAGTAGGTATCTGGTTTACCGCGTT 19599424 Query 43104 TGGCGTCAGTACTATGGCGTTTAACTTGAATGGTTTTAACTTTAACCAATCACTTGTTGA 43163 || |||||| ||||| || || || |||||||| || || |||||||| | ||||| Sbjct 19599425 AGGTACCAGTACCATGGCTTTCAATTTAAATGGTTTCAATTTCAACCAATCCATAGTTGA 19599484 Query 43164 TAATCAGAATCATGTCATCCCTACTTGGGCTGATATTTTGAATCGTGCCAACCTTGGCTT 43223 || ||| || ||| || || |||||||||||| | || || || ||||||||| | Sbjct 19599485 TAGTCAAGGTCGTGTAATTAATATATGGGCTGATATTATAAACCGAGCTAACCTTGGCAT 19599544 Query 43224 TGAGGTGATGCACGAGCGGAATGCACATAACTTCCCGCTTGATCT 43268 || || ||||| || || ||||| ||||||||||| || || || Sbjct 19599545 GGAAGTTATGCATGAACGTAATGCTCATAACTTCCCTCTAGACCT 19599589 >seq8 Length=25521646 Score = 120 bits (132), Expect = 9e-23 Identities = 237/346 (68%), Gaps = 5/346 (1%) Strand=Plus/Plus Query 42392 CTTTCATTGCTGCCCC--TCCGGTAGACATTGATGGCATTCGTGAACCTGTCTCTGGCTC 42449 ||||||||| |||||| ||| ||||| |||||||| |||||||| ||| | ||||| || Sbjct 14924666 CTTTCATTGTTGCCCCCCTCCAGTAGATATTGATGGTATTCGTGAGCCTTT-TCTGGATC 14924724 Query 42450 TCTTCTGTATGGCAACAACATCATCTCTGGTGCCGTCGTGCCTAGCAGTAACGCAATTGG 42509 ||| || || || ||||| || || || ||||| | | |||| | || || || Sbjct 14924725 TCTACTTTACGGAAACAATATTATTTCGGGTGCTATTATTCCTACTTATGCGGCTATAGG 14924784 Query 42510 ACTACATTTGTATTCGATCTGGGAAGCCA-ATACCCTTGACGAATGGCTCTACAATGGCG 42568 || || || ||||| ||||||| |||| |||| |||||| | |||||||||| Sbjct 14924785 TTAGCACTTTTACTCGATATGGGAAGTGGCATACG-TTGATGAATGGTTATACAATGGCG 14924843 Query 42569 GACCTTATCAGCTCGTCGTGTTCCACTTCCTTATCGGTATCTTCTCTTACTTGGGACGCG 42628 | |||||| | || | || | |||||| | | ||| | | |||| | || |||| Sbjct 14924844 GTCCTTATTAACTAATTGTTCTACACTTCTTACTTGGTGTAGCTTGTTACATAGGTCGCG 14924903 Query 42629 AATGGGAACTTTCGTACCGACTTGGGATGAGGCCCTGGATCTTTGTTGCTTACTCTGCCC 42688 | ||||||||| | || | || ||| || ||||| ||||| || || || | Sbjct 14924904 AGTGGGAACTTAGTTTTCGTTTGGGTATGCACCCTTGGATTGCGGTTGCATATTCAGCTC 14924963 Query 42689 CTGTGGCTGCAGCGACTGCAGTCTTCCTTGTCTATCCATTTGGGCA 42734 ||| || || |||||| | ||| | | |||||| | || || Sbjct 14924964 TTGTTGCAGCTACGACTGTTTTTTTCTTGATTTATCCAATCGGTCA 14925009 >seq3662 Length=122019 Score = 89.7 bits (98), Expect = 1e-13 Identities = 133/189 (70%), Gaps = 0/189 (0%) Strand=Plus/Plus Query 43071 TTGGCCCGTTGTGGGGATTTGGTTCACTTCTCTTGGCGTCAGTACTATGGCGTTTAACTT 43130 ||| || || || || || ||||| | | | || |||||||||| || || || || Sbjct 4488 TTGACCTGTAGTAGGTATCTGGTTTATCGCGTTAGGTATCAGTACTATAGCTTTCAATTT 4547 Query 43131 GAATGGTTTTAACTTTAACCAATCACTTGTTGATAATCAGAATCATGTCATCCCTACTTG 43190 ||||||||||| || || |||| | |||||| ||| || ||| || ||||| Sbjct 4548 AAATGGTTTTAATTTCAATTAATCCGTAGTTGATTGTCAAGGTCGTGTAATTAATACTTA 4607 Query 43191 GGCTGATATTTTGAATCGTGCCAACCTTGGCTTTGAGGTGATGCACGAGCGGAATGCACA 43250 | |||||||| | | | || |||||||| | || || || || || || ||||| || Sbjct 4608 GACTGATATTATTAGCTGAGCTAACCTTGGTATGGAAGTTATACATGAACGTAATGCTCA 4667 Query 43251 TAACTTCCC 43259 ||||||||| Sbjct 4668 TAACTTCCC 4676 >seq6 Length=33111450 Score = 87.8 bits (96), Expect = 5e-13 Identities = 140/196 (71%), Gaps = 4/196 (2%) Strand=Plus/Plus Query 42289 TTTTGTAACTGGGTGACTTCGACTAACAACCGTCTTTATGTTGGGTGGTTTGGTGTGCTG 42348 || ||||||||| | || ||| | ||||||||||| | | || ||| || | || Sbjct 18648353 TTCTGTAACTGGATAACCAACACTGAAAACCGTCTTTACATCGAATGATTTTGTCTTTTG 18648412 Query 42349 ATGATTCCCTGTCTGCTCG-CTGCTACCACCTGT-TTTATTGTCGCTTTCATTGCTGCCC 42406 |||| ||||| || | | | || | | ||| |||||| || ||||||||| | ||| Sbjct 18648413 ATGA-TCCCTACCTTATTGACCGC-AACTTTTGTATTTATTATCACTTTCATTGTTACCC 18648470 Query 42407 CTCCGGTAGACATTGATGGCATTCGTGAACCTGTCTCTGGCTCTCTTCTGTATGGCAACA 42466 ||| |||| ||||| || |||||||| || || ||| | ||||| || || || |||| Sbjct 18648471 CTCAAATAGATATTGACGGTATTCGTGAGCCAGTTTCTCGATCTCTACTTTACGGAAACA 18648530 Query 42467 ACATCATCTCTGGTGC 42482 | || || || ||||| Sbjct 18648531 ATATTATTTCGGGTGC 18648546 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 143509665473004