Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lupinus_20angustifolius_20[refseq_20GCF_5F001865875.1_202016-11-16] 13,573 sequences; 609,203,021 total letters Query= NC_020874.1 Length=46198 Score E Sequences producing significant alignments: (Bits) Value seq664 509 5e-140 seq19 188 2e-43 seq5 167 7e-37 seq1 161 3e-35 seq9 134 4e-27 seq3 132 1e-26 seq8 111 5e-20 seq3662 86.0 2e-12 >seq664 Length=18451 Score = 509 bits (564), Expect = 5e-140 Identities = 707/985 (72%), Gaps = 4/985 (0%) Strand=Plus/Plus Query 25877 GCTAAGTCAAGTGGAAAGTTATGAGCATTACGCTCGTGCATAACTTCAAAGCCGAGGTTA 25936 |||| ||| || || ||||||||||||||||| || ||||||||||| | || |||||| Sbjct 524 GCTAGGTCTAGAGGGAAGTTATGAGCATTACGTTCATGCATAACTTCCATACCAAGGTTA 583 Query 25937 GCTCGGTTTAATACATCAGCCCATGTAGGTATTATCTTTCCATTAACATCTACTACTGAC 25996 |||||||| | | ||||||||| ||| |||| || | | ||| ||||| || Sbjct 584 GCTCGGTTAATAATATCAGCCCAGGTATTAATTACACGACCTTGACTATCAACTACGGAT 643 Query 25997 TGGTTAAAGTTAAAACCATTTAGGTTAAATGCCATTGTGCAGATACCCATAGATGTCAGC 26056 ||||| || || |||||||||| || || ||||| || | |||||| | | || | | Sbjct 644 TGGTTGAAATTGAAACCATTTAAATTGAAAGCCATGGTACTGATACCTAACGCGGTAAAC 703 Query 26057 CATATGCCAACAACCGGCCAAGTAGCAAGAAAGAAATGAAGAGAACGGCTGTTATTAAAA 26116 || || || || || ||||||| ||| ||||||||||| | |||||| ||||| ||| Sbjct 704 CAGATACCTACTACAGGCCAAGCAGCTAGAAAGAAATGTAAAGAACGAGAATTATTGAAA 763 Query 26117 CTCGCATACTGAAAAATTAATCTCCCAAAGTACCCGTGTGCAGCGACAATATTATATGTC 26176 || ||||| || || || |||| ||||| || || || ||||| ||||||||||| || Sbjct 764 CTAGCATATTGGAAGATCAATCGGCCAAAATAACCATGAGCAGCTACAATATTATAGGTT 823 Query 26177 TCTTCATCTTGCCCAAACTTATAGCCATAATTCTGTGAGACTTCCTCTGTCGTTTCTGCA 26236 ||||| ||||| ||||| | || || | || || | | ||||| ||||| Sbjct 824 TCTTCCTCTTGACCAAATCTGTAACCTTCGTTAGCAGATTCATTTTCTGTGGTTTCCCTG 883 Query 26237 ATAAGTGAGGAAGTAACCAAACTTCCGTGCATAGCAGCGAAAAGAGCTCCACCGAAAACC 26296 || | ||||| ||||| |||||||||||| ||| || | || ||||| || Sbjct 884 ATCAAACTAGAAGTTACCAAGGAACCGTGCATAGCACTGAATAGGGAGCCGCCGAATACA 943 Query 26297 CCAGCAACACCAGCCATATGGAATGGGTGCATGAGTATATTATGTTCTGCTTGGAATACG 26356 ||||| || || ||| || ||||| ||||| || ||||| || || || || ||||| Sbjct 944 CCAGCTACGCCTAACATGTGAAATGGATGCATAAGAATATTGTGCTCAGCCTGAAATACA 1003 Query 26357 AACATAAAGTTAAAAGTACCAGAGATACCAAGAGGCATTCCATCACTAAAACTCCCTTGT 26416 | ||||||||| |||||||||||||| || |||||||| ||||| ||| || ||||| Sbjct 1004 ATCATAAAGTTGAAAGTACCAGAGATTCCTAGAGGCATACCATCCGAAAAGCTTCCTTGA 1063 Query 26417 CCGAAAGGATAAACTAAGAACACTGCGAGAGCTGCGGATAGTGGTGCTGTATATGCAACA 26476 |||| ||||||| ||||| || || ||| || | | || |||| ||||||||| Sbjct 1064 CCGATTGGATAAATCAAGAAAACAGCAGTAGCAGCTGCAACAGGAGCTGAATATGCAACC 1123 Query 26477 AATATCCATGGTCTCATTCCTAGTCTGTAAGATAGTTCCCACTGTCTCCCTGCATATGCT 26536 ||||| || | ||| || || | || |||||||||| | || || Sbjct 1124 GCAATCCAAGGGCGCATACCCAGACGAAAACTAAGTTCCCACTCACGACCCATGTAACAA 1183 Query 26537 GCTACTCCTATTAAGAAGTGGAAGATAATGAGTTGATATGGTCCGCCATTGTATAGCCAC 26596 ||||| || | ||||||||| | | ||| |||| ||| || ||||||||||||| ||| Sbjct 1184 GCTACACCAAGTAAGAAGTGTAGAACAATTAGTTCATAAGGACCGCCATTGTATAACCAT 1243 Query 26597 TCGTCCA-GTGTGCCAGCTTCCCAGATCGGGTAAAAATGTAGTCCGATTGCGTTAGAGGA 26655 || || | | |||| |||||||| ||||||||||| || | ||||| || ||| | Sbjct 1244 TCATCAACGGATGCC-GCTTCCCATATCGGGTAAAAGTGCAAACCGATAGCCGCAGAAGT 1302 Query 26656 GGGGACGACTGCTCCTGATATTATATTGTTTCCGTACATTAACGAGCCGGAAACTGGCTC 26715 || | | || || || || |||||||||||||| | || || || ||||| ||||| Sbjct 1303 AGGAATAATAGCACCCGAAATAATATTGTTTCCGTAAAGTAGAGATCCAGAAACAGGCTC 1362 Query 26716 ACGTATGCCATCTATATCTACAGGCGGTGCTGCGATGAAGGCAAGTATAAA-ACATGTAG 26774 ||| || ||||| |||||||| || || || || ||||| || | ||||| ||| | || Sbjct 1363 ACGAATACCATCAATATCTACTGGAGGGGCAGCAATGAAAGCGATAATAAATACA-GAAG 1421 Query 26775 TGGCTGCGAGTAAGCAGGGTATCATAAGCACCCCGAACCATCCCACATAGAGACGGTTCT 26834 | || | | |||| || ||||| | || || |||||||| | || |||||||| | Sbjct 1422 TTGCGGTCAATAAGGTAGGGATCATCAAAACACCAAACCATCCGATGTAAAGACGGTTTT 1481 Query 26835 CAGTACTTGTAACCCACTCACAAAA 26859 |||| || || | ||| | ||| || Sbjct 1482 CAGTGCTGGTTATCCAGTTACAGAA 1506 >seq19 Length=18159812 Score = 188 bits (208), Expect = 2e-43 Identities = 212/284 (75%), Gaps = 0/284 (0%) Strand=Plus/Minus Query 25877 GCTAAGTCAAGTGGAAAGTTATGAGCATTACGCTCGTGCATAACTTCAAAGCCGAGGTTA 25936 |||| ||| || || ||||||||||||||||| || ||||||||||| | || |||||| Sbjct 6185718 GCTAGGTCTAGAGGGAAGTTATGAGCATTACGTTCATGCATAACTTCCATACCAAGGTTA 6185659 Query 25937 GCTCGGTTTAATACATCAGCCCATGTAGGTATTATCTTTCCATTAACATCTACTACTGAC 25996 |||||||| | | ||||||||| ||| |||| || | | ||| ||||| || Sbjct 6185658 GCTCGGTTAATAATATCAGCCCAGGTATTAATTACACGACCTTGACTATCAACTACGGAT 6185599 Query 25997 TGGTTAAAGTTAAAACCATTTAGGTTAAATGCCATTGTGCAGATACCCATAGATGTCAGC 26056 ||||| || || |||||||||| || || ||||| || | |||||| | | || | | Sbjct 6185598 TGGTTGAAATTGAAACCATTTAAATTGAAAGCCATGGTACTGATACCTAACGCGGTAAAC 6185539 Query 26057 CATATGCCAACAACCGGCCAAGTAGCAAGAAAGAAATGAAGAGAACGGCTGTTATTAAAA 26116 || || || || || ||||||| ||| ||||||||||| | |||||| ||||| ||| Sbjct 6185538 CAGATACCTACTACAGGCCAAGCAGCTAGAAAGAAATGTAAAGAACGAGAATTATTGAAA 6185479 Query 26117 CTCGCATACTGAAAAATTAATCTCCCAAAGTACCCGTGTGCAGC 26160 || ||||| || || || |||| ||||| || || || ||||| Sbjct 6185478 CTAGCATATTGGAAGATCAATCGGCCAAAATAACCATGAGCAGC 6185435 >seq5 Length=26376911 Score = 167 bits (184), Expect = 7e-37 Identities = 235/325 (72%), Gaps = 4/325 (1%) Strand=Plus/Plus Query 26537 GCTACTCCTATTAAGAAGTGGAAGATAATGAGTTGATATGGTCCGCCATTGTATAGCCAC 26596 ||||| || | ||||||||| | | ||| |||| ||| || ||||||||||||| ||| Sbjct 10577057 GCTACACCAAGTAAGAAGTGTAGAACAATTAGTTCATAAGGACCGCCATTGTATAACCAT 10577116 Query 26597 TCGTCCA-GTGTGCCAGCTTCCCAGATCGGGTAAAAATGTAGTCCGATTGCGTTAGAGGA 26655 || || | | |||| |||||||| ||||||||||| || | ||||| || ||| | Sbjct 10577117 TCATCAACGGATGCC-GCTTCCCATATCGGGTAAAAGTGCAAACCGATAGCCGCAGAAGT 10577175 Query 26656 GGGGACGACTGCTCCTGATATTATATTGTTTCCGTACATTAACGAGCCGGAAACTGGCTC 26715 || | | || || || || |||||||||||||| | || || || ||||| ||||| Sbjct 10577176 AGGAATAATAGCACCCGAAATAATATTGTTTCCGTAAAGTAGAGATCCAGAAACAGGCTC 10577235 Query 26716 ACGTATGCCATCTATATCTACAGGCGGTGCTGCGATGAAGGCAAGTATAAA-ACATGTAG 26774 ||| || ||||| |||||||| || | || || ||||| || | ||||| ||| | || Sbjct 10577236 ACGAATACCATCAATATCTACTGGAAGGGCAGCAATGAAAGCGATAATAAATACA-GAAG 10577294 Query 26775 TGGCTGCGAGTAAGCAGGGTATCATAAGCACCCCGAACCATCCCACATAGAGACGGTTCT 26834 | || | | |||| || ||||| | || || |||||||| | || |||||||| | Sbjct 10577295 TTGCGGTCAATAAGGTAGGGATCATCAAAACACCAAACCATCCGATGTAAAGACGGTTTT 10577354 Query 26835 CAGTACTTGTAACCCACTCACAAAA 26859 |||| || | | ||| | ||| || Sbjct 10577355 CAGTGCTGATTATCCAGTTACAGAA 10577379 Score = 93.3 bits (102), Expect = 1e-14 Identities = 155/219 (71%), Gaps = 5/219 (2%) Strand=Plus/Plus Query 25877 GCTAAGTCAAGTGGAAAGTTATGAGCATTACGCTCGTGCATAACTTCAAAGCCGAGGTTA 25936 |||| ||| || || ||||||||||||||| | || ||||||||||| | || |||||| Sbjct 10060246 GCTAGGTCTAGAGGGAAGTTATGAGCATTATGTTCATGCATAACTTCCATACCAAGGTTA 10060305 Query 25937 GCTCGGTT--TAATACATCAGCCCATGTAGGTATTATCTTTCCATTAACATCTACTACTG 25994 |||||||| ||||| || || ||| ||| |||| || | | ||| |||| | Sbjct 10060306 GCTCGGTTAATAATA-AT-AGTCCAGGTATTAATTACACGACCTTGACTATCAACTATGG 10060363 Query 25995 ACTGGTTAAAGTTAAAACCATTTAGGTTAAATGCCATTGTGCAGATACCCATAGATGTCA 26054 | ||||| || || |||||||||| || || | ||| || | ||||| | | | | Sbjct 10060364 ATTGGTTGAAATTGAAACCATTTAAATTGAAAGTCATAGTACTAATACCTAATGCGATAA 10060423 Query 26055 GCCATATGCCAACAACCGGCCAAGTAGCAAGAAAGAAAT 26093 ||| | || || | || |||| ||| ||||| |||| Sbjct 10060424 ACCAGACACCTACTATAGG-CAAGCAGCTAGAAAAAAAT 10060461 >seq1 Length=36457581 Score = 161 bits (178), Expect = 3e-35 Identities = 192/260 (74%), Gaps = 3/260 (1%) Strand=Plus/Minus Query 25878 CTAAGTCAAGTGGAAAGTTATGAGCATTACGCTCGTGCATAACTTCAAAGCCGAGGTTAG 25937 ||| ||| || || ||||||||||||||||| || ||||||||||| | ||| ||||||| Sbjct 19599591 CTAGGTCTAGAGGGAAGTTATGAGCATTACGTTCATGCATAACTTCCATGCCAAGGTTAG 19599532 Query 25938 CTCGGTTTAATACATCAGCCCATGTAGGTATTATCTTTCCATTAACATCTACTACTGACT 25997 ||||||||| | |||||||||| || |||| || | | ||| |||| || | Sbjct 19599531 CTCGGTTTATAATATCAGCCCATATATTAATTACACGACCTTGACTATCAACTATGGATT 19599472 Query 25998 GGTTAAAGTTAAAACCATTTAGGTTAAATGCCATTGTGCAGATACCCATAGATGTCAGCC 26057 |||| || || |||||||||| || || ||||| || | | |||| | | || | || Sbjct 19599471 GGTTGAAATTGAAACCATTTAAATTGAAAGCCATGGTACTGGTACCTAACGCGGTAAACC 19599412 Query 26058 ATATGCCAACAACCGGCCAAGTAGCAAGAAAGAAATGAAGAGAACGGCTGTTATTAAAAC 26117 | || || || || ||||||| ||| | ||||||||| | |||||| |||| |||| Sbjct 19599411 AGATACCTACTACAGGCCAAGCAGCTAAAAAGAAATGTAAAGAACGAGACTTATCGAAAC 19599352 Query 26118 TCGCAT---ACTGAAAAATT 26134 | |||| ||| ||||||| Sbjct 19599351 TAGCATAAAACTAAAAAATT 19599332 >seq9 Length=21753712 Score = 134 bits (148), Expect = 4e-27 Identities = 180/249 (72%), Gaps = 1/249 (0%) Strand=Plus/Plus Query 25877 GCTAAGTCAAGTGGAAAGTTATGAGCATTACGCTCGTGCATAACTTCAAAGCCGAGGTTA 25936 |||| ||| || | ||||||||||||||||| || || |||||||| | || |||||| Sbjct 18376389 GCTAGGTCTAGATGGAAGTTATGAGCATTACGTTCATGTATAACTTCCATACCAAGGTTA 18376448 Query 25937 GCTCGGTTTAATACATCAGCCCATGTAGGTATTATCTTTCCATTAACATCTACTACTGAC 25996 |||||||| | | |||||| || || |||| || | | ||| ||||| | Sbjct 18376449 GCTCGGTTAATAATATCAGCTCAGATATTAATTACACGACCTTGACTATCAACTACATAT 18376508 Query 25997 TGGTTAAAGTTAAAACCATTTAGGTTAAATGCCATTGTGCAGATACCCATAGATG-TCAG 26055 ||||| || || |||||||||| ||| || ||||| |||| |||||| | | | | | Sbjct 18376509 TGGTTGAAATTGAAACCATTTAAGTTGAAAGCCATGGTGCTGATACCTAATGCGGTTAAA 18376568 Query 26056 CCATATGCCAACAACCGGCCAAGTAGCAAGAAAGAAATGAAGAGAACGGCTGTTATTAAA 26115 ||| || || || || |||||| | | ||||||||||| | ||||| ||||| || Sbjct 18376569 CCAGATACCTACTACAGGCCAAACAACTAGAAAGAAATGTAAAGAACAAGAATTATTGAA 18376628 Query 26116 ACTCGCATA 26124 ||| ||||| Sbjct 18376629 ACTAGCATA 18376637 >seq3 Length=30153019 Score = 132 bits (146), Expect = 1e-26 Identities = 184/254 (72%), Gaps = 3/254 (1%) Strand=Plus/Minus Query 26607 TGCCAGCTTCCCAGATCGGGTAAAAATGTAGTCCGATTGCGTTAGAGGAGGGGACGACTG 26666 |||| |||||||| ||||||||||| || | ||||| || ||| | || | | | Sbjct 19659977 TGCC-GCTTCCCATATCGGGTAAAAGTGCAAACCGATAGCCGCAGAAGTAGGAATAATAG 19659919 Query 26667 CTCCTGATATTATATTGTTTCCGTACATTAACGAGCCGGAAACTGGCTCACGTATGCCAT 26726 | || || || |||||||||||||| | || || || ||||| |||||||| || |||| Sbjct 19659918 CACCCGAAATAATATTGTTTCCGTAAAGTAGAGATCCAGAAACAGGCTCACGAATACCAT 19659859 Query 26727 CTATATCTACAGGCGGTGCTGCGATGAAGGCAAGTATAAA-ACATGTAGTGGCTGCGAGT 26785 | |||||||| || || || || ||||| || | ||||| ||| | ||| || | | | Sbjct 19659858 CAATATCTACTGGAGGGGCAGCAATGAAAGCGATAATAAATACA-GAAGTTGCGGTCAAT 19659800 Query 26786 AAGCAGGGTATCATAAGCACCCCGAACCATCCCACATAGAGACGGTTCTCAGTACTTGTA 26845 ||| || ||||| | || || |||||||| | || |||||||| ||||| || || Sbjct 19659799 AAGGTAGGGATCATCAAAACACCAAACCATCCGATGTAAAGACGGTTTTCAGTGCTGGTT 19659740 Query 26846 ACCCACTCACAAAA 26859 | ||| | ||| || Sbjct 19659739 ATCCAGTTACAGAA 19659726 Score = 80.6 bits (88), Expect = 8e-11 Identities = 67/82 (82%), Gaps = 0/82 (0%) Strand=Plus/Plus Query 25882 GTCAAGTGGAAAGTTATGAGCATTACGCTCGTGCATAACTTCAAAGCCGAGGTTAGCTCG 25941 ||| || || ||||||||||||||||| || ||||||||||| | || | ||||||||| Sbjct 15965276 GTCTAGAGGGAAGTTATGAGCATTACGTTCATGCATAACTTCCATACCAATGTTAGCTCG 15965335 Query 25942 GTTTAATACATCAGCCCATGTA 25963 ||| | | ||||||||| ||| Sbjct 15965336 GTTAATAATATCAGCCCAAGTA 15965357 >seq8 Length=25521646 Score = 111 bits (122), Expect = 5e-20 Identities = 151/207 (73%), Gaps = 3/207 (1%) Strand=Plus/Minus Query 26537 GCTACTCCTATTAAGAAGTGGAAGATAATGAGTTGATATGGTCCGCCATTGTATAGCCAC 26596 ||||| || | ||||||||| | | ||| |||| ||| || ||||||||||||| ||| Sbjct 14924886 GCTACACCAAGTAAGAAGTGTAGAACAATTAGTTAATAAGGACCGCCATTGTATAACCAT 14924827 Query 26597 TCGTCCA-GTGTGCCAGCTTCCCAGATCGGGTAAAAATGTAGTCCGATTGCGTTAGAGGA 26655 || || | || ||||| ||||||| |||| |||||| || || || || | | | Sbjct 14924826 TCATCAACGTATGCCA-CTTCCCATATCGAGTAAAAGTGCTAACCTATAGCCGCATAAGT 14924768 Query 26656 GGGGACGACTGCTCCTGATATTATATTGTTTCCGTACATTAACGAGCCGGAAACTGGCTC 26715 || | | || || || || |||||||||||||| | || || || |||| ||||| Sbjct 14924767 AGGAATAATAGCACCCGAAATAATATTGTTTCCGTAAAGTAGAGATCCAGAAA-AGGCTC 14924709 Query 26716 ACGTATGCCATCTATATCTACAGGCGG 26742 ||| || ||||| |||||||| || || Sbjct 14924708 ACGAATACCATCAATATCTACTGGAGG 14924682 >seq3662 Length=122019 Score = 86.0 bits (94), Expect = 2e-12 Identities = 119/167 (71%), Gaps = 0/167 (0%) Strand=Plus/Minus Query 25877 GCTAAGTCAAGTGGAAAGTTATGAGCATTACGCTCGTGCATAACTTCAAAGCCGAGGTTA 25936 |||| ||| | || ||||||||||||||||| || || |||||||| | || |||||| Sbjct 4688 GCTAGGTCTAAAGGGAAGTTATGAGCATTACGTTCATGTATAACTTCCATACCAAGGTTA 4629 Query 25937 GCTCGGTTTAATACATCAGCCCATGTAGGTATTATCTTTCCATTAACATCTACTACTGAC 25996 |||| | | | | ||||| | | ||| |||| || | | ||| ||||| || Sbjct 4628 GCTCAGCTAATAATATCAGTCTAAGTATTAATTACACGACCTTGACAATCAACTACGGAT 4569 Query 25997 TGGTTAAAGTTAAAACCATTTAGGTTAAATGCCATTGTGCAGATACC 26043 | || || ||||||||||||| || || || || || | |||||| Sbjct 4568 TAATTGAAATTAAAACCATTTAAATTGAAAGCTATAGTACTGATACC 4522 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 147688191872160