Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lupinus_20angustifolius_20[refseq_20GCF_5F001865875.1_202016-11-16] 13,573 sequences; 609,203,021 total letters Query= NC_020875.1 Length=182801 Score E Sequences producing significant alignments: (Bits) Value seq664 558 4e-154 seq19 167 3e-36 seq5 167 3e-36 seq3 136 5e-27 seq8 125 8e-24 seq9 114 2e-20 seq1 111 2e-19 seq17 84.2 3e-11 >seq664 Length=18451 Score = 558 bits (618), Expect = 4e-154 Identities = 709/974 (73%), Gaps = 6/974 (1%) Strand=Plus/Minus Query 154991 CTGACAACCGCATCTATGTCGGTTGGTTCGGTGTTCTTATGATCCCTTGCCTCCTCGCTG 155050 |||| ||||| | || |||| ||||| |||||| | ||||||||| | | | | | Sbjct 1484 CTGAAAACCGTCTTTACATCGGATGGTTTGGTGTTTTGATGATCCCTACCTTATTGACCG 1425 Query 155051 CTGCTACATGCTTCATTGTCGCCTTCATTGCTGCACCTCCTGTAGACATTGATGGTATTC 155110 | || | || ||| |||| ||||||||||| ||||| ||||| ||||||||||||| Sbjct 1424 CAACTTCTGTATTTATTATCGCTTTCATTGCTGCCCCTCCAGTAGATATTGATGGTATTC 1365 Query 155111 GTGAACCCGTCGCTGGTTCTTTAATGTATGGTAACAACATCATCTCTGGTGCTGTTGTCC 155170 |||| || || |||| ||| || | || || ||||| || || || |||||| || | | Sbjct 1364 GTGAGCCTGTTTCTGGATCTCTACTTTACGGAAACAATATTATTTCGGGTGCTATTATTC 1305 Query 155171 CTAGTTCAAACGCAATTGGTCTCCACTTCTATCCTATTTGGGAAGCAGCAACTCTTGATG 155230 ||| ||| || || ||| | ||||| || || || |||||||| ||| | |||||| Sbjct 1304 CTACTTCTGCGGCTATCGGTTTGCACTTTTACCCGATATGGGAAGCGGCATCCGTTGATG 1245 Query 155231 AGTGGTTGTACAATGGTGGTCCTTTCCAACTTGTAGTCTTCCACTTCCTTATCGGAATCA 155290 | ||||| |||||||| ||||||| |||| | || | |||||| | | || | Sbjct 1244 AATGGTTATACAATGGCGGTCCTTATGAACTAATTGTTCTACACTTCTTACTTGGTGTAG 1185 Query 155291 CAGCATACTGTGGTCGTCAGTGGGAACTTTCTTACCGTCTTGGCATGCGTCCTTGGATCT 155350 | ||| |||||| ||||||||||| || ||||| || ||||| |||||||| Sbjct 1184 CTTGTTACATGGGTCGTGAGTGGGAACTTAGTTTTCGTCTGGGTATGCGCCCTTGGATTG 1125 Query 155351 GTGTTGCATACTCTGCACCAGTATCTGCTGCGTTCGCTGTATTCCTTGTTTATCCTTTCG 155410 |||||||| || || || || | ||||| ||||| ||| | ||||||| ||| Sbjct 1124 CGGTTGCATATTCAGCTCCTGTTGCAGCTGCTACTGCTGTTTTCTTGATTTATCCAATCG 1065 Query 155411 GTCAAGGTTCTTTCTCTGATGCGATGCCTCTTGGTATCTCTGGTACTTTTAACTATATGT 155470 ||||||| || || |||| |||||||| || |||||||||||||| |||| |||| Sbjct 1064 GTCAAGGAAGCTTTTCGGATGGTATGCCTCTAGGAATCTCTGGTACTTTCAACTTTATGA 1005 Query 155471 TCGTGTTCCAAGCAGAACACAATATCCTTATGCACCCCTTCCACATGCTTGGAGTAGCAG 155530 | || || || || || |||||||| |||||||| || || |||||| | || ||||| | Sbjct 1004 TTGTATTTCAGGCTGAGCACAATATTCTTATGCATCCATTTCACATGTTAGGCGTAGCTG 945 Query 155531 GTGTGTTCGGTGGATCTCTTTTCTCTGCTATGCACGGTTCATTGGTGACATCTTCACTAA 155590 |||| ||||| || || || ||| ||||||||||||||| ||||| || ||| | | Sbjct 944 GTGTATTCGGCGGCTCCCTATTCAGTGCTATGCACGGTTCCTTGGTAACTTCTAGTTTGA 885 Query 155591 TCCGTGAAACTACTGAGCAAGAGTCTCAGAACTATGGTTACAAGTTCGGACAAGAAGAAG 155650 || | ||||| || || | || ||| ||| | ||||||| || || ||||| |||| Sbjct 884 TCAGGGAAACCACAGAAAATGAATCTGCTAACGAAGGTTACAGATTTGGTCAAGAGGAAG 825 Query 155651 AAACTTATAACATTGTTGCTGCTCATGGATACTTCGGTCGTCTTATCTTCCAGTATGCAT 155710 |||| ||||| ||||| ||||||||||| || || || || | |||||||| ||||| Sbjct 824 AAACCTATAATATTGTAGCTGCTCATGGTTATTTTGGCCGATTGATCTTCCAATATGCTA 765 Query 155711 CCTTCAACAACTCAAGAAGTCTTCACTTCTTCCTTGCTGCATGGCCTGTGGTCTGCATCT 155770 ||||| || || | | | || ||||| || ||||| |||||||| || | |||| Sbjct 764 GTTTCAATAATTCTCGTTCTTTACATTTCTTTCTAGCTGCTTGGCCTGTAGTAGGTATCT 705 Query 155771 GGGCAACTGCTATGGGTGTGTCAACGATGGCATTCAACCTTAACGGTTTCAACTTCAACC 155830 || || || | ||| | || ||||| ||||| | || |||||||| ||||||| Sbjct 704 GGTTTACCGCGTTAGGTATCAGTACCATGGCTTTCAATTTAAATGGTTTCAATTTCAACC 645 Query 155831 AGTCTGTAGTAGACGCTAGT---GGTAAAGTCATCCCTACATGGGCAGACATTCTTAACC 155887 | || ||||| || |||| ||| || || ||| ||||| || ||| |||||| Sbjct 644 AATCCGTAGTTGA---TAGTCAAGGTCGTGTAATTAATACCTGGGCTGATATTATTAACC 588 Query 155888 GCGCTGGTCTTGGTATGGAAGTAATGCACGAGCGTAACGCTCACAACTTCCCTCTTGACC 155947 | ||| |||||||||||||| ||||| || ||||| ||||| ||||||||||| |||| Sbjct 587 GAGCTAACCTTGGTATGGAAGTTATGCATGAACGTAATGCTCATAACTTCCCTCTAGACC 528 Query 155948 TTGCTGCTGCTGAG 155961 | ||||| || ||| Sbjct 527 TAGCTGCGGCCGAG 514 >seq19 Length=18159812 Score = 167 bits (184), Expect = 3e-36 Identities = 216/297 (73%), Gaps = 6/297 (2%) Strand=Plus/Plus Query 155668 GCTGCTCATGGATACTTCGGTCGTCTTATCTTCCAGTATGCATCCTTCAACAACTCAAGA 155727 ||||||||||| || || || || | |||||||| ||||| ||||| || || | Sbjct 6185435 GCTGCTCATGGTTATTTTGGCCGATTGATCTTCCAATATGCTAGTTTCAATAATTCTCGT 6185494 Query 155728 AGTCTTCACTTCTTCCTTGCTGCATGGCCTGTGGTCTGCATCTGGGCAACTGCTATGGGT 155787 | | || ||||| || ||||| |||||||| || | |||||| || || | ||| Sbjct 6185495 TCTTTACATTTCTTTCTAGCTGCTTGGCCTGTAGTAGGTATCTGGTTTACCGCGTTAGGT 6185554 Query 155788 GTGTCAACGATGGCATTCAACCTTAACGGTTTCAACTTCAACCAGTCTGTAGTAGACGCT 155847 | || ||||| ||||| | || |||||||| |||||||| || ||||| || | Sbjct 6185555 ATCAGTACCATGGCTTTCAATTTAAATGGTTTCAATTTCAACCAATCCGTAGTTGA---T 6185611 Query 155848 AGT---GGTAAAGTCATCCCTACATGGGCAGACATTCTTAACCGCGCTGGTCTTGGTATG 155904 ||| ||| || || ||| ||||| || ||| ||||||| ||| ||||||||| Sbjct 6185612 AGTCAAGGTCGTGTAATTAATACCTGGGCTGATATTATTAACCGAGCTAACCTTGGTATG 6185671 Query 155905 GAAGTAATGCACGAGCGTAACGCTCACAACTTCCCTCTTGACCTTGCTGCTGCTGAG 155961 ||||| ||||| || ||||| ||||| ||||||||||| ||||| ||||| || ||| Sbjct 6185672 GAAGTTATGCATGAACGTAATGCTCATAACTTCCCTCTAGACCTAGCTGCGGCCGAG 6185728 >seq5 Length=26376911 Score = 167 bits (184), Expect = 3e-36 Identities = 209/287 (73%), Gaps = 0/287 (0%) Strand=Plus/Minus Query 154991 CTGACAACCGCATCTATGTCGGTTGGTTCGGTGTTCTTATGATCCCTTGCCTCCTCGCTG 155050 |||| ||||| | || |||| ||||| |||||| | ||||||||| | | | | | Sbjct 10577357 CTGAAAACCGTCTTTACATCGGATGGTTTGGTGTTTTGATGATCCCTACCTTATTGACCG 10577298 Query 155051 CTGCTACATGCTTCATTGTCGCCTTCATTGCTGCACCTCCTGTAGACATTGATGGTATTC 155110 | || | || ||| |||| ||||||||||| | ||| ||||| ||||||||||||| Sbjct 10577297 CAACTTCTGTATTTATTATCGCTTTCATTGCTGCCCTTCCAGTAGATATTGATGGTATTC 10577238 Query 155111 GTGAACCCGTCGCTGGTTCTTTAATGTATGGTAACAACATCATCTCTGGTGCTGTTGTCC 155170 |||| || || |||| ||| || | || || ||||| || || || |||||| || | | Sbjct 10577237 GTGAGCCTGTTTCTGGATCTCTACTTTACGGAAACAATATTATTTCGGGTGCTATTATTC 10577178 Query 155171 CTAGTTCAAACGCAATTGGTCTCCACTTCTATCCTATTTGGGAAGCAGCAACTCTTGATG 155230 ||| ||| || || ||| | ||||| || || || |||||||| ||| | |||||| Sbjct 10577177 CTACTTCTGCGGCTATCGGTTTGCACTTTTACCCGATATGGGAAGCGGCATCCGTTGATG 10577118 Query 155231 AGTGGTTGTACAATGGTGGTCCTTTCCAACTTGTAGTCTTCCACTTC 155277 | ||||| |||||||| ||||||| |||| | || | |||||| Sbjct 10577117 AATGGTTATACAATGGCGGTCCTTATGAACTAATTGTTCTACACTTC 10577071 Score = 98.7 bits (108), Expect = 1e-15 Identities = 125/171 (73%), Gaps = 6/171 (4%) Strand=Plus/Minus Query 155794 ACGATGGCATTCAACCTTAACGGTTTCAACTTCAACCAGTCTGTAGTAGACGCTAGT--- 155850 || ||| | ||||| | || |||||||| |||||||| || |||| || |||| Sbjct 10060403 ACTATGACTTTCAATTTAAATGGTTTCAATTTCAACCAATCCATAGTTGA---TAGTCAA 10060347 Query 155851 GGTAAAGTCATCCCTACATGGGCAGACATTCTTAACCGCGCTGGTCTTGGTATGGAAGTA 155910 ||| || || ||| ||| | ||| ||||||| ||| |||||||||||||| Sbjct 10060346 GGTCGTGTAATTAATACCTGGACTATTATTATTAACCGAGCTAACCTTGGTATGGAAGTT 10060287 Query 155911 ATGCACGAGCGTAACGCTCACAACTTCCCTCTTGACCTTGCTGCTGCTGAG 155961 ||||| || | ||| ||||| ||||||||||| ||||| ||||| || ||| Sbjct 10060286 ATGCATGAACATAATGCTCATAACTTCCCTCTAGACCTAGCTGCGGCCGAG 10060236 >seq3 Length=30153019 Score = 136 bits (150), Expect = 5e-27 Identities = 168/230 (73%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 154991 CTGACAACCGCATCTATGTCGGTTGGTTCGGTGTTCTTATGATCCCTTGCCTCCTCGCTG 155050 |||| ||||| | || |||| ||||| |||||| | ||||||||| | | | | | Sbjct 19659748 CTGAAAACCGTCTTTACATCGGATGGTTTGGTGTTTTGATGATCCCTACCTTATTGACCG 19659807 Query 155051 CTGCTACATGCTTCATTGTCGCCTTCATTGCTGCACCTCCTGTAGACATTGATGGTATTC 155110 | || | || ||| |||| ||||||||||| ||||| ||||| ||||||||||||| Sbjct 19659808 CAACTTCTGTATTTATTATCGCTTTCATTGCTGCCCCTCCAGTAGATATTGATGGTATTC 19659867 Query 155111 GTGAACCCGTCGCTGGTTCTTTAATGTATGGTAACAACATCATCTCTGGTGCTGTTGTCC 155170 |||| || || |||| ||| || | || || ||||| || || || |||||| || | | Sbjct 19659868 GTGAGCCTGTTTCTGGATCTCTACTTTACGGAAACAATATTATTTCGGGTGCTATTATTC 19659927 Query 155171 CTAGTTCAAACGCAATTGGTCTCCACTTCTATCCTATTTGGGAAGCAGCA 155220 ||| ||| || || ||| | ||||| || || || |||||||| ||| Sbjct 19659928 CTACTTCTGCGGCTATCGGTTTGCACTTTTACCCGATATGGGAAGCGGCA 19659977 Score = 91.5 bits (100), Expect = 2e-13 Identities = 76/93 (82%), Gaps = 0/93 (0%) Strand=Plus/Minus Query 155865 TACATGGGCAGACATTCTTAACCGCGCTGGTCTTGGTATGGAAGTAATGCACGAGCGTAA 155924 ||| ||||| || ||| ||||||| ||| ||||||||||||| ||||| || ||||| Sbjct 15965357 TACTTGGGCTGATATTATTAACCGAGCTAACATTGGTATGGAAGTTATGCATGAACGTAA 15965298 Query 155925 CGCTCACAACTTCCCTCTTGACCTTGCTGCTGC 155957 ||||| ||||||||||| ||||| ||||| || Sbjct 15965297 TGCTCATAACTTCCCTCTAGACCTCGCTGCGGC 15965265 >seq8 Length=25521646 Score = 125 bits (138), Expect = 8e-24 Identities = 235/343 (69%), Gaps = 3/343 (1%) Strand=Plus/Plus Query 155074 TTCATTGCTGCACC--TCCTGTAGACATTGATGGTATTCGTGAACCCGTCGCTGGTTCTT 155131 ||||||| ||| || ||| ||||| ||||||||||||||||| || | |||| ||| Sbjct 14924668 TTCATTGTTGCCCCCCTCCAGTAGATATTGATGGTATTCGTGAGCCTTTT-CTGGATCTC 14924726 Query 155132 TAATGTATGGTAACAACATCATCTCTGGTGCTGTTGTCCCTAGTTCAAACGCAATTGGTC 155191 || | || || ||||| || || || |||||| || | |||| || || || ||| Sbjct 14924727 TACTTTACGGAAACAATATTATTTCGGGTGCTATTATTCCTACTTATGCGGCTATAGGTT 14924786 Query 155192 TCCACTTCTATCCTATTTGGGAAGCAGCAACTCTTGATGAGTGGTTGTACAATGGTGGTC 155251 ||||| || | || ||||||| ||| ||||||| ||||| |||||||| |||| Sbjct 14924787 AGCACTTTTACTCGATATGGGAAGTGGCATACGTTGATGAATGGTTATACAATGGCGGTC 14924846 Query 155252 CTTTCCAACTTGTAGTCTTCCACTTCCTTATCGGAATCACAGCATACTGTGGTCGTCAGT 155311 ||| |||| | || | |||||| | | || | | ||| ||||| ||| Sbjct 14924847 CTTATTAACTAATTGTTCTACACTTCTTACTTGGTGTAGCTTGTTACATAGGTCGCGAGT 14924906 Query 155312 GGGAACTTTCTTACCGTCTTGGCATGCGTCCTTGGATCTGTGTTGCATACTCTGCACCAG 155371 |||||||| || ||| | || |||| |||||||| |||||||| || || | | Sbjct 14924907 GGGAACTTAGTTTTCGTTTGGGTATGCACCCTTGGATTGCGGTTGCATATTCAGCTCTTG 14924966 Query 155372 TATCTGCTGCGTTCGCTGTATTCCTTGTTTATCCTTTCGGTCA 155414 | | ||| || | | | ||| | ||||||| ||||||| Sbjct 14924967 TTGCAGCTACGACTGTTTTTTTCTTGATTTATCCAATCGGTCA 14925009 >seq9 Length=21753712 Score = 114 bits (126), Expect = 2e-20 Identities = 162/225 (72%), Gaps = 7/225 (3%) Strand=Plus/Minus Query 155734 CACTTCTTCCTTGCTGCATGGCCTGTGGTCTGCATCTGGGC-AACTGCTATGGGTGTGTC 155792 || ||||| || | || |||||||| || | |||||| ||| || | ||| | Sbjct 18376607 CATTTCTTTCTAGTTGTTTGGCCTGTAGTAGGTATCTGGTTTAACCGCATTAGGTATCAG 18376548 Query 155793 AACGATGGCATTCAACCTTAACGGTTTCAACTTCAACCAGTCTGTAGTAGACGCTAGT-- 155850 || ||||| |||||| | || |||||||| |||||||| | |||||| || |||| Sbjct 18376547 CACCATGGCTTTCAACTTAAATGGTTTCAATTTCAACCAATATGTAGTTGA---TAGTCA 18376491 Query 155851 -GGTAAAGTCATCCCTACATGGGCAGACATTCTTAACCGCGCTGGTCTTGGTATGGAAGT 155909 ||| || || || || || || ||| ||||||| ||| |||||||||||||| Sbjct 18376490 AGGTCGTGTAATTAATATCTGAGCTGATATTATTAACCGAGCTAACCTTGGTATGGAAGT 18376431 Query 155910 AATGCACGAGCGTAACGCTCACAACTTCCCTCTTGACCTTGCTGC 155954 || || || ||||| ||||| ||||||| ||| ||||| ||||| Sbjct 18376430 TATACATGAACGTAATGCTCATAACTTCCATCTAGACCTAGCTGC 18376386 >seq1 Length=36457581 Score = 111 bits (122), Expect = 2e-19 Identities = 164/231 (71%), Gaps = 6/231 (3%) Strand=Plus/Plus Query 155734 CACTTCTTCCTTGCTGCATGGCCTGTGGTCTGCATCTGGGCAACTGCTATGGGTGTGTCA 155793 || ||||| | ||||| |||||||| || | |||||| || || | ||| Sbjct 19599375 CATTTCTTTTTAGCTGCTTGGCCTGTAGTAGGTATCTGGTTTACCGCGTTAGGTACCAGT 19599434 Query 155794 ACGATGGCATTCAACCTTAACGGTTTCAACTTCAACCAGTCTGTAGTAGACGCTAGT--- 155850 || ||||| ||||| | || |||||||| |||||||| || |||| || |||| Sbjct 19599435 ACCATGGCTTTCAATTTAAATGGTTTCAATTTCAACCAATCCATAGTTGA---TAGTCAA 19599491 Query 155851 GGTAAAGTCATCCCTACATGGGCAGACATTCTTAACCGCGCTGGTCTTGGTATGGAAGTA 155910 ||| || || || |||||| || ||| | ||||| ||| ||||| |||||||| Sbjct 19599492 GGTCGTGTAATTAATATATGGGCTGATATTATAAACCGAGCTAACCTTGGCATGGAAGTT 19599551 Query 155911 ATGCACGAGCGTAACGCTCACAACTTCCCTCTTGACCTTGCTGCTGCTGAG 155961 ||||| || ||||| ||||| ||||||||||| ||||| | || || ||| Sbjct 19599552 ATGCATGAACGTAATGCTCATAACTTCCCTCTAGACCTAGTTGTGGCCGAG 19599602 >seq17 Length=21299880 Score = 84.2 bits (92), Expect = 3e-11 Identities = 117/163 (72%), Gaps = 1/163 (1%) Strand=Plus/Minus Query 155545 TCTCTTTTCTCTGCTATGCACGGTTCATTGGTGACATCTTCACTAATCCGTGAAACTACT 155604 || || ||| |||||||||||||| ||||| || ||| | ||| | ||||| || Sbjct 21194285 TCCCTATTCAGTGCTATGCACGGTTTCTTGGT-ACTTCTAGTTTGATCAGGGAAACCACA 21194227 Query 155605 GAGCAAGAGTCTCAGAACTATGGTTACAAGTTCGGACAAGAAGAAGAAACTTATAACATT 155664 || | || | | ||| | ||||||| || || ||||| ||||||| ||||| ||| Sbjct 21194226 GAAAATGAATTTGCTAACGAAGGTTACAGATTTGGTCAAGAGGAAGAAATCTATAATATT 21194167 Query 155665 GTTGCTGCTCATGGATACTTCGGTCGTCTTATCTTCCAGTATG 155707 || |||||| |||| || || || | | |||||||| |||| Sbjct 21194166 GTAGCTGCTAATGGTTATTTTGGCTGATTGATCTTCCAATATG 21194124 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 584735975397880