Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lupinus_20angustifolius_20[refseq_20GCF_5F001865875.1_202016-11-16] 13,573 sequences; 609,203,021 total letters Query= NC_020878.1 Length=44945 Score E Sequences producing significant alignments: (Bits) Value seq664 513 4e-141 seq5 176 1e-39 seq19 172 2e-38 seq3 145 2e-30 seq8 118 3e-22 seq9 109 2e-19 seq3662 96.9 1e-15 >seq664 Length=18451 Score = 513 bits (568), Expect = 4e-141 Identities = 714/995 (72%), Gaps = 4/995 (0%) Strand=Plus/Plus Query 40523 CTCAGCAGAAGCTAAGTCTAGAGGAAAGTTGTGAGCGTTACGCTCGTGCATTACTTCCAT 40582 ||| || | ||||| ||||||||| ||||| ||||| ||||| || ||||| |||||||| Sbjct 514 CTCGGCCGCAGCTAGGTCTAGAGGGAAGTTATGAGCATTACGTTCATGCATAACTTCCAT 573 Query 40583 ACCTAGACTCTGTCTGTTAAGAACATCAGCCCAAGTAGGAATGACTTTACCATTAGCGTC 40642 ||| || | || ||||| || ||||||||| ||| ||| || ||| | | || Sbjct 574 ACCAAGGTTAGCTCGGTTAATAATATCAGCCCAGGTATTAATTACACGACCTTGACTATC 633 Query 40643 TACTACTGACTGGTTAAAGTTAAAACCATTGAGGTTAAAAGCCATAGTAGATATACCCAT 40702 ||||| || ||||| || || |||||||| | || |||||||| ||| ||||| | Sbjct 634 AACTACGGATTGGTTGAAATTGAAACCATTTAAATTGAAAGCCATGGTACTGATACCTAA 693 Query 40703 GGAGGTAAGCCATATGCCAATAACCGGGAAAGCACCAAGAAAGAAGTGTAGCGCACGGCT 40762 | ||||| ||| || || | || || ||||| | |||||||| |||| | ||| Sbjct 694 CGCGGTAAACCAGATACCTACTACAGGCCAAGCAGCTAGAAAGAAATGTAAAGAACGAGA 753 Query 40763 ATTGTTGAATGAAGCATATTGAAATATTAGTCTACCAAAGTAACCGTGTGCAGCTACGAT 40822 ||| ||||| ||||||||| || || | || ||||| ||||| || |||||||| || Sbjct 754 ATTATTGAAACTAGCATATTGGAAGATCAATCGGCCAAAATAACCATGAGCAGCTACAAT 813 Query 40823 GTTATAAGTCTCGCCTTCCTGACCAAACTTATACCCGTAGTTCTGTGATTCAGTTTCCGT 40882 ||||| || || | || |||||||| | || || | ||| |||||| |||| || Sbjct 814 ATTATAGGTTTCTTCCTCTTGACCAAATCTGTAACCTTCGTTAGCAGATTCATTTTCTGT 873 Query 40883 GGTCTCCCGAATGATTGAGGAAGTAACAAGGCTTCCGTGCATAGCAGCAAACAAAGCACC 40942 ||| |||| || | ||||| || | | |||||||||||| || | | || Sbjct 874 GGTTTCCCTGATCAAACTAGAAGTTACCAAGGAACCGTGCATAGCACTGAATAGGGAGCC 933 Query 40943 ACCAAAGACGCCTGCAACGCCGAGCATATGGAATGGGTGCATGAGAATGTTGTGTTCTGC 41002 || || || || || ||||| | ||| || ||||| ||||| ||||| ||||| || || Sbjct 934 GCCGAATACACCAGCTACGCCTAACATGTGAAATGGATGCATAAGAATATTGTGCTCAGC 993 Query 41003 TTGGAAGACAAACATGAAGTTGAATGTTCCACTGATTCCTAAAGGCATACCATCAGAGAA 41062 || || |||| ||| |||||||| || ||| |||||||| |||||||||||| || || Sbjct 994 CTGAAATACAATCATAAAGTTGAAAGTACCAGAGATTCCTAGAGGCATACCATCCGAAAA 1053 Query 41063 AGAACCCTGACCGAATGGATAAACTAAGAATACAGCTAGAGCTGCTGACAATGGAGCTGT 41122 || ||||||| |||||||| ||||| ||||| ||| |||| | ||||||| Sbjct 1054 GCTTCCTTGACCGATTGGATAAATCAAGAAAACAGCAGTAGCAGCTGCAACAGGAGCTGA 1113 Query 41123 GTATGCCACAAATATCCATGGTCTCATACCTAGTCTGTATGAAAGTTCCCACTGTCTACC 41182 ||||| || ||||| || | |||||| || | | ||||||||||| | ||| Sbjct 1114 ATATGCAACCGCAATCCAAGGGCGCATACCCAGACGAAAACTAAGTTCCCACTCACGACC 1173 Query 41183 AGCGTATGCTGCTACTCCTATTAAAAAGTGAAAGACAATGAGTTGATATGGTCCGCCGTT 41242 ||| ||||| || | ||| ||||| | ||||| |||| ||| || ||||| || Sbjct 1174 CATGTAACAAGCTACACCAAGTAAGAAGTGTAGAACAATTAGTTCATAAGGACCGCCATT 1233 Query 41243 GTATAGCCACTCGTCCA-GTGTGCCGGCTTCCCAGATTGGGTAGAAATGTAGTCCGATTG 41301 ||||| ||| || || | | |||| |||||||| || ||||| || || | ||||| | Sbjct 1234 GTATAACCATTCATCAACGGATGCC-GCTTCCCATATCGGGTAAAAGTGCAAACCGATAG 1292 Query 41302 CGTTAGAGCTCGGAACGACAGCTCCAGATATAATATTGTTCCCGTACATTAACGAGCCGG 41361 | ||| | |||| | ||| || || ||||||||||| ||||| | || || || | Sbjct 1293 CCGCAGAAGTAGGAATAATAGCACCCGAAATAATATTGTTTCCGTAAAGTAGAGATCCAG 1352 Query 41362 AAACGGGCTCACGTATGCCATCTATATCTACAGGCGGTGCTGCGATAAAGGCGATTATGA 41421 |||| |||||||| || ||||| |||||||| || || || || || || ||||| || | Sbjct 1353 AAACAGGCTCACGAATACCATCAATATCTACTGGAGGGGCAGCAATGAAAGCGATAATAA 1412 Query 41422 A-ACATGTGGTAGCAGTTAGTAATGCTGGAATCATTAGCACACCAAACCAACCTACGTAT 41480 | ||| | || || || | ||| | || ||||| | ||||||||||| || | ||| Sbjct 1413 ATACA-GAAGTTGCGGTCAATAAGGTAGGGATCATCAAAACACCAAACCATCCGATGTAA 1471 Query 41481 AGGCGGTTGTCGGTGCTAGTGACCCAGTTACAAAA 41515 || ||||| || ||||| || | ||||||||| || Sbjct 1472 AGACGGTTTTCAGTGCTGGTTATCCAGTTACAGAA 1506 >seq5 Length=26376911 Score = 176 bits (194), Expect = 1e-39 Identities = 237/325 (73%), Gaps = 4/325 (1%) Strand=Plus/Plus Query 41193 GCTACTCCTATTAAAAAGTGAAAGACAATGAGTTGATATGGTCCGCCGTTGTATAGCCAC 41252 ||||| || | ||| ||||| | ||||| |||| ||| || ||||| ||||||| ||| Sbjct 10577057 GCTACACCAAGTAAGAAGTGTAGAACAATTAGTTCATAAGGACCGCCATTGTATAACCAT 10577116 Query 41253 TCGTCCAGTG-TGCCGGCTTCCCAGATTGGGTAGAAATGTAGTCCGATTGCGTTAGAGCT 41311 || || | | ||||| ||||||| || ||||| || || | ||||| || ||| | Sbjct 10577117 TCATCAACGGATGCCG-CTTCCCATATCGGGTAAAAGTGCAAACCGATAGCCGCAGAAGT 10577175 Query 41312 CGGAACGACAGCTCCAGATATAATATTGTTCCCGTACATTAACGAGCCGGAAACGGGCTC 41371 |||| | ||| || || ||||||||||| ||||| | || || || ||||| ||||| Sbjct 10577176 AGGAATAATAGCACCCGAAATAATATTGTTTCCGTAAAGTAGAGATCCAGAAACAGGCTC 10577235 Query 41372 ACGTATGCCATCTATATCTACAGGCGGTGCTGCGATAAAGGCGATTATGAA-ACATGTGG 41430 ||| || ||||| |||||||| || | || || || || ||||| || || ||| | | Sbjct 10577236 ACGAATACCATCAATATCTACTGGAAGGGCAGCAATGAAAGCGATAATAAATACA-GAAG 10577294 Query 41431 TAGCAGTTAGTAATGCTGGAATCATTAGCACACCAAACCAACCTACGTATAGGCGGTTGT 41490 | || || | ||| | || ||||| | ||||||||||| || | ||| || ||||| | Sbjct 10577295 TTGCGGTCAATAAGGTAGGGATCATCAAAACACCAAACCATCCGATGTAAAGACGGTTTT 10577354 Query 41491 CGGTGCTAGTGACCCAGTTACAAAA 41515 | ||||| | | ||||||||| || Sbjct 10577355 CAGTGCTGATTATCCAGTTACAGAA 10577379 Score = 95.1 bits (104), Expect = 3e-15 Identities = 127/177 (72%), Gaps = 0/177 (0%) Strand=Plus/Plus Query 40523 CTCAGCAGAAGCTAAGTCTAGAGGAAAGTTGTGAGCGTTACGCTCGTGCATTACTTCCAT 40582 ||| || | ||||| ||||||||| ||||| ||||| ||| | || ||||| |||||||| Sbjct 10060236 CTCGGCCGCAGCTAGGTCTAGAGGGAAGTTATGAGCATTATGTTCATGCATAACTTCCAT 10060295 Query 40583 ACCTAGACTCTGTCTGTTAAGAACATCAGCCCAAGTAGGAATGACTTTACCATTAGCGTC 40642 ||| || | || ||||| || | || ||| ||| ||| || ||| | | || Sbjct 10060296 ACCAAGGTTAGCTCGGTTAATAATAATAGTCCAGGTATTAATTACACGACCTTGACTATC 10060355 Query 40643 TACTACTGACTGGTTAAAGTTAAAACCATTGAGGTTAAAAGCCATAGTAGATATACC 40699 |||| || ||||| || || |||||||| | || |||| ||||||| ||||| Sbjct 10060356 AACTATGGATTGGTTGAAATTGAAACCATTTAAATTGAAAGTCATAGTACTAATACC 10060412 >seq19 Length=18159812 Score = 172 bits (190), Expect = 2e-38 Identities = 215/295 (73%), Gaps = 0/295 (0%) Strand=Plus/Minus Query 40523 CTCAGCAGAAGCTAAGTCTAGAGGAAAGTTGTGAGCGTTACGCTCGTGCATTACTTCCAT 40582 ||| || | ||||| ||||||||| ||||| ||||| ||||| || ||||| |||||||| Sbjct 6185728 CTCGGCCGCAGCTAGGTCTAGAGGGAAGTTATGAGCATTACGTTCATGCATAACTTCCAT 6185669 Query 40583 ACCTAGACTCTGTCTGTTAAGAACATCAGCCCAAGTAGGAATGACTTTACCATTAGCGTC 40642 ||| || | || ||||| || ||||||||| ||| ||| || ||| | | || Sbjct 6185668 ACCAAGGTTAGCTCGGTTAATAATATCAGCCCAGGTATTAATTACACGACCTTGACTATC 6185609 Query 40643 TACTACTGACTGGTTAAAGTTAAAACCATTGAGGTTAAAAGCCATAGTAGATATACCCAT 40702 ||||| || ||||| || || |||||||| | || |||||||| ||| ||||| | Sbjct 6185608 AACTACGGATTGGTTGAAATTGAAACCATTTAAATTGAAAGCCATGGTACTGATACCTAA 6185549 Query 40703 GGAGGTAAGCCATATGCCAATAACCGGGAAAGCACCAAGAAAGAAGTGTAGCGCACGGCT 40762 | ||||| ||| || || | || || ||||| | |||||||| |||| | ||| Sbjct 6185548 CGCGGTAAACCAGATACCTACTACAGGCCAAGCAGCTAGAAAGAAATGTAAAGAACGAGA 6185489 Query 40763 ATTGTTGAATGAAGCATATTGAAATATTAGTCTACCAAAGTAACCGTGTGCAGCT 40817 ||| ||||| ||||||||| || || | || ||||| ||||| || |||||| Sbjct 6185488 ATTATTGAAACTAGCATATTGGAAGATCAATCGGCCAAAATAACCATGAGCAGCT 6185434 >seq3 Length=30153019 Score = 145 bits (160), Expect = 2e-30 Identities = 187/254 (74%), Gaps = 3/254 (1%) Strand=Plus/Minus Query 41263 TGCCGGCTTCCCAGATTGGGTAGAAATGTAGTCCGATTGCGTTAGAGCTCGGAACGACAG 41322 ||||| ||||||| || ||||| || || | ||||| || ||| | |||| | || Sbjct 19659977 TGCCG-CTTCCCATATCGGGTAAAAGTGCAAACCGATAGCCGCAGAAGTAGGAATAATAG 19659919 Query 41323 CTCCAGATATAATATTGTTCCCGTACATTAACGAGCCGGAAACGGGCTCACGTATGCCAT 41382 | || || ||||||||||| ||||| | || || || ||||| |||||||| || |||| Sbjct 19659918 CACCCGAAATAATATTGTTTCCGTAAAGTAGAGATCCAGAAACAGGCTCACGAATACCAT 19659859 Query 41383 CTATATCTACAGGCGGTGCTGCGATAAAGGCGATTATGAA-ACATGTGGTAGCAGTTAGT 41441 | |||||||| || || || || || || ||||| || || ||| | || || || | | Sbjct 19659858 CAATATCTACTGGAGGGGCAGCAATGAAAGCGATAATAAATACA-GAAGTTGCGGTCAAT 19659800 Query 41442 AATGCTGGAATCATTAGCACACCAAACCAACCTACGTATAGGCGGTTGTCGGTGCTAGTG 41501 || | || ||||| | ||||||||||| || | ||| || ||||| || ||||| || Sbjct 19659799 AAGGTAGGGATCATCAAAACACCAAACCATCCGATGTAAAGACGGTTTTCAGTGCTGGTT 19659740 Query 41502 ACCCAGTTACAAAA 41515 | ||||||||| || Sbjct 19659739 ATCCAGTTACAGAA 19659726 >seq8 Length=25521646 Score = 118 bits (130), Expect = 3e-22 Identities = 231/333 (69%), Gaps = 9/333 (3%) Strand=Plus/Minus Query 41070 TGACCGAATGGATAAACTAAGAATACAGC--TAG-AGCTGCTGACAATGGAGCTGTGTAT 41126 ||||||| |||||||| ||||| | | | | | |||||| |||| |||||| ||| Sbjct 14925009 TGACCGATTGGATAAATCAAGAAAAAAACAGTCGTAGCTGCA-ACAA--GAGCTGAATAT 14924953 Query 41127 GCCACAAATATCCATGGTCTCATACCTAGTCTGTATGAAAGTTCCCACTGTCTACCAGCG 41186 || || ||||| || |||||| | | | ||||||||||| | ||| | Sbjct 14924952 GCAACCGCAATCCAAGGGTGCATACCCAAACGAAAACTAAGTTCCCACTCGCGACCTATG 14924893 Query 41187 TATGCTGCTACTCCTATTAAAAAGTGAAAGACAATGAGTTGATATGGTCCGCCGTTGTAT 41246 || ||||| || | ||| ||||| | ||||| |||| ||| || ||||| |||||| Sbjct 14924892 TAACAAGCTACACCAAGTAAGAAGTGTAGAACAATTAGTTAATAAGGACCGCCATTGTAT 14924833 Query 41247 AGCCACTCGTCCA-GTGTGCCGGCTTCCCAGATTGGGTAGAAATGTAGTCCGATTGCGTT 41305 | ||| || || | || |||| ||||||| || | ||| || || || || || Sbjct 14924832 AACCATTCATCAACGTATGCC-ACTTCCCATATCGAGTAAAAGTGCTAACCTATAGCCGC 14924774 Query 41306 AGAGCTCGGAACGACAGCTCCAGATATAATATTGTTCCCGTACATTAACGAGCCGGAAAC 41365 | | | |||| | ||| || || ||||||||||| ||||| | || || || |||| Sbjct 14924773 ATAAGTAGGAATAATAGCACCCGAAATAATATTGTTTCCGTAAAGTAGAGATCCAGAAA- 14924715 Query 41366 GGGCTCACGTATGCCATCTATATCTACAGGCGG 41398 |||||||| || ||||| |||||||| || || Sbjct 14924714 AGGCTCACGAATACCATCAATATCTACTGGAGG 14924682 >seq9 Length=21753712 Score = 109 bits (120), Expect = 2e-19 Identities = 176/252 (70%), Gaps = 1/252 (0%) Strand=Plus/Plus Query 40532 AGCTAAGTCTAGAGGAAAGTTGTGAGCGTTACGCTCGTGCATTACTTCCATACCTAGACT 40591 ||||| ||||||| | ||||| ||||| ||||| || || || ||||||||||| || | Sbjct 18376388 AGCTAGGTCTAGATGGAAGTTATGAGCATTACGTTCATGTATAACTTCCATACCAAGGTT 18376447 Query 40592 CTGTCTGTTAAGAACATCAGCCCAAGTAGGAATGACTTTACCATTAGCGTCTACTACTGA 40651 || ||||| || |||||| || || ||| || ||| | | || ||||| | Sbjct 18376448 AGCTCGGTTAATAATATCAGCTCAGATATTAATTACACGACCTTGACTATCAACTACATA 18376507 Query 40652 CTGGTTAAAGTTAAAACCATTGAGGTTAAAAGCCATAGTAGATATACC-CATGGAGGTAA 40710 ||||| || || |||||||| | ||| |||||||| || ||||| ||| | ||| Sbjct 18376508 TTGGTTGAAATTGAAACCATTTAAGTTGAAAGCCATGGTGCTGATACCTAATGCGGTTAA 18376567 Query 40711 GCCATATGCCAATAACCGGGAAAGCACCAAGAAAGAAGTGTAGCGCACGGCTATTGTTGA 40770 ||| || || | || || || || | |||||||| |||| | || ||| |||| Sbjct 18376568 ACCAGATACCTACTACAGGCCAAACAACTAGAAAGAAATGTAAAGAACAAGAATTATTGA 18376627 Query 40771 ATGAAGCATATT 40782 | |||||||| Sbjct 18376628 AACTAGCATATT 18376639 >seq3662 Length=122019 Score = 96.9 bits (106), Expect = 1e-15 Identities = 140/198 (71%), Gaps = 0/198 (0%) Strand=Plus/Minus Query 40523 CTCAGCAGAAGCTAAGTCTAGAGGAAAGTTGTGAGCGTTACGCTCGTGCATTACTTCCAT 40582 ||| || | ||||| ||||| ||| ||||| ||||| ||||| || || || |||||||| Sbjct 4698 CTCGGCCGCAGCTAGGTCTAAAGGGAAGTTATGAGCATTACGTTCATGTATAACTTCCAT 4639 Query 40583 ACCTAGACTCTGTCTGTTAAGAACATCAGCCCAAGTAGGAATGACTTTACCATTAGCGTC 40642 ||| || | || | ||| || ||||| | ||||| ||| || ||| | | || Sbjct 4638 ACCAAGGTTAGCTCAGCTAATAATATCAGTCTAAGTATTAATTACACGACCTTGACAATC 4579 Query 40643 TACTACTGACTGGTTAAAGTTAAAACCATTGAGGTTAAAAGCCATAGTAGATATACCCAT 40702 ||||| || | || || ||||||||||| | || ||||| |||||| ||||| | Sbjct 4578 AACTACGGATTAATTGAAATTAAAACCATTTAAATTGAAAGCTATAGTACTGATACCTAA 4519 Query 40703 GGAGGTAAGCCATATGCC 40720 | | ||| ||| || || Sbjct 4518 CGCGATAAACCAGATACC 4501 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 143679238136982