Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lupinus_20angustifolius_20[refseq_20GCF_5F001865875.1_202016-11-16] 13,573 sequences; 609,203,021 total letters Query= NC_021071.1 Length=177211 Score E Sequences producing significant alignments: (Bits) Value seq664 549 2e-151 seq19 181 1e-40 seq8 113 5e-20 seq1 113 5e-20 seq5 107 2e-18 seq9 105 8e-18 seq17 104 3e-17 seq3662 96.9 4e-15 seq3 87.8 2e-12 >seq664 Length=18451 Score = 549 bits (608), Expect = 2e-151 Identities = 720/996 (72%), Gaps = 6/996 (1%) Strand=Plus/Plus Query 67349 AGACTCAGCAGCAGCAAGGTCAAGAGGGAAGTTGTGAGCGTTACGCTCGTGCATAACTTC 67408 || ||| || ||||| ||||| ||||||||||| ||||| ||||| || ||||||||||| Sbjct 511 AGCCTCGGCCGCAGCTAGGTCTAGAGGGAAGTTATGAGCATTACGTTCATGCATAACTTC 570 Query 67409 CATTCCAAGTCCTGCTCTGTTAAGGATGTCTGCCCAAGTAGGAATCACTTTACCACCTGC 67468 ||| ||||| |||| ||||| || || ||||| ||| ||| || || |||| Sbjct 571 CATACCAAGGTTAGCTCGGTTAATAATATCAGCCCAGGTATTAATTAC---ACGACCTTG 627 Query 67469 G---TCAACGACGGATTGGTTGAAGTTGAAACCGTTGAGGTTGAATGCCATAGTTGACAC 67525 ||||| |||||||||||||| |||||||| || | ||||| ||||| || | Sbjct 628 ACTATCAACTACGGATTGGTTGAAATTGAAACCATTTAAATTGAAAGCCATGGTACTGAT 687 Query 67526 ACCCATTGCAGTGAACCAGATGCAGACCACAGGGAATGCAGCAAGGAAGAAGTGAAGACT 67585 ||| | || || |||||||| | || ||||| | ||||| || ||||| || | | Sbjct 688 ACCTAACGCGGTAAACCAGATACCTACTACAGGCCAAGCAGCTAGAAAGAAATGTAAAGA 747 Query 67586 TCTTGAGTTGTTGAAAGATGCATACTGGAAGATCAAGCGACCGAAGTATCCATGAGCAGC 67645 | || || |||||| ||||| ||||||||||| || || || || ||||||||||| Sbjct 748 ACGAGAATTATTGAAACTAGCATATTGGAAGATCAATCGGCCAAAATAACCATGAGCAGC 807 Query 67646 AACAATGTTGTAAGTCTCTTCTTCTTGTCCGAACTTGTAACCGTAGTTCTGTGACTCTTG 67705 ||||| || || || ||||| ||||| || || ||||||| | ||| || || | Sbjct 808 TACAATATTATAGGTTTCTTCCTCTTGACCAAATCTGTAACCTTCGTTAGCAGATTCATT 867 Query 67706 CTCAGTAGTTTCTCTGATAAGAGAAGAAGTAACAAGAGAACCGTGCATAGCACTAAAGAG 67765 || || ||||| ||||| | | |||||| || | ||||||||||||||||| || || Sbjct 868 TTCTGTGGTTTCCCTGATCAAACTAGAAGTTACCAAGGAACCGTGCATAGCACTGAATAG 927 Query 67766 TGAACCACCGAATACACCTGCTACTCCAAGCATATGGAATGGGTGCATAAGGATGTTGTG 67825 || || ||||||||||| ||||| || | ||| || ||||| |||||||| || ||||| Sbjct 928 GGAGCCGCCGAATACACCAGCTACGCCTAACATGTGAAATGGATGCATAAGAATATTGTG 987 Query 67826 CTCTGCTTGGAACACGAACATGTAGTTAAAAGTACCAGAAATACCAAGAGGCATTGCGTC 67885 ||| || || || || | ||| |||| ||||||||||| || || |||||||| | || Sbjct 988 CTCAGCCTGAAATACAATCATAAAGTTGAAAGTACCAGAGATTCCTAGAGGCATACCATC 1047 Query 67886 AGAGAAAGAACCTTGACCGAAAGGATAGACCAAGAACACAGCGAATGCTGCAGACACTGG 67945 || || |||||||||| ||||| | |||||| ||||| || || | || || Sbjct 1048 CGAAAAGCTTCCTTGACCGATTGGATAAATCAAGAAAACAGCAGTAGCAGCTGCAACAGG 1107 Query 67946 AGCAGAGTATGCTACACAGATCCAAGGACGCATACCAAGACGGTAAGAAAGTTCCCACTG 68005 ||| || ||||| || |||||||| |||||||| ||||| || ||||||||||| Sbjct 1108 AGCTGAATATGCAACCGCAATCCAAGGGCGCATACCCAGACGAAAACTAAGTTCCCACTC 1167 Query 68006 ACGACCACAGTATGCTGTGATTCCGATAAGGAAGTGGAAGACTACAAGTTGGAAAGGTCC 68065 |||||| ||| | | || | | |||||| | || | |||| |||| || Sbjct 1168 ACGACCCATGTAACAAGCTACACCAAGTAAGAAGTGTAGAACAATTAGTTCATAAGGACC 1227 Query 68066 ACCATTATACAACCACTCATCTAGAGTTGCTGCTTCCCAGATAGGATAGAAGTGAAGACC 68125 ||||| || ||||| ||||| | | ||| |||||||| || || || ||||| | ||| Sbjct 1228 GCCATTGTATAACCATTCATCAACGGATGCCGCTTCCCATATCGGGTAAAAGTGCAAACC 1287 Query 68126 GATTGCGTTTGAACTAGGAACAACAGCACCAGAAATGATGTTGTTACCGTACATGAGCGA 68185 ||| || ||| |||||| || |||||| ||||| || ||||| ||||| | || || Sbjct 1288 GATAGCCGCAGAAGTAGGAATAATAGCACCCGAAATAATATTGTTTCCGTAAAGTAGAGA 1347 Query 68186 ACCTGCAACAGGTTCTCTGATACCATCGATATCAACTGGAGGTGCTGCAATGAATGCAAT 68245 || | |||||| || | |||||||| ||||| |||||||| || |||||||| || || Sbjct 1348 TCCAGAAACAGGCTCACGAATACCATCAATATCTACTGGAGGGGCAGCAATGAAAGCGAT 1407 Query 68246 GATGAAGCAAGTTGCTGCTGCGAGCAAGCAAGGAATCATCAACACACCGAACCAACCAAC 68305 || || || | ||| | | ||| ||| |||||||| ||||| ||||| || | Sbjct 1408 AATAAATACAGAAGTTGCGGTCAATAAGGTAGGGATCATCAAAACACCAAACCATCCGAT 1467 Query 68306 ATAGATGCGATTGTCAACTGAGGTGACCCAGTTACA 68341 || | || || ||| ||| | ||||||||| Sbjct 1468 GTAAAGACGGTTTTCAGTGCTGGTTATCCAGTTACA 1503 >seq19 Length=18159812 Score = 181 bits (200), Expect = 1e-40 Identities = 221/300 (74%), Gaps = 6/300 (2%) Strand=Plus/Minus Query 67349 AGACTCAGCAGCAGCAAGGTCAAGAGGGAAGTTGTGAGCGTTACGCTCGTGCATAACTTC 67408 || ||| || ||||| ||||| ||||||||||| ||||| ||||| || ||||||||||| Sbjct 6185731 AGCCTCGGCCGCAGCTAGGTCTAGAGGGAAGTTATGAGCATTACGTTCATGCATAACTTC 6185672 Query 67409 CATTCCAAGTCCTGCTCTGTTAAGGATGTCTGCCCAAGTAGGAATCACTTTACCACCTGC 67468 ||| ||||| |||| ||||| || || ||||| ||| ||| || || |||| Sbjct 6185671 CATACCAAGGTTAGCTCGGTTAATAATATCAGCCCAGGTATTAATTAC---ACGACCTTG 6185615 Query 67469 G---TCAACGACGGATTGGTTGAAGTTGAAACCGTTGAGGTTGAATGCCATAGTTGACAC 67525 ||||| |||||||||||||| |||||||| || | ||||| ||||| || | Sbjct 6185614 ACTATCAACTACGGATTGGTTGAAATTGAAACCATTTAAATTGAAAGCCATGGTACTGAT 6185555 Query 67526 ACCCATTGCAGTGAACCAGATGCAGACCACAGGGAATGCAGCAAGGAAGAAGTGAAGACT 67585 ||| | || || |||||||| | || ||||| | ||||| || ||||| || | | Sbjct 6185554 ACCTAACGCGGTAAACCAGATACCTACTACAGGCCAAGCAGCTAGAAAGAAATGTAAAGA 6185495 Query 67586 TCTTGAGTTGTTGAAAGATGCATACTGGAAGATCAAGCGACCGAAGTATCCATGAGCAGC 67645 | || || |||||| ||||| ||||||||||| || || || || ||||||||||| Sbjct 6185494 ACGAGAATTATTGAAACTAGCATATTGGAAGATCAATCGGCCAAAATAACCATGAGCAGC 6185435 >seq8 Length=25521646 Score = 113 bits (124), Expect = 5e-20 Identities = 228/333 (68%), Gaps = 9/333 (3%) Strand=Plus/Minus Query 67899 TGACCGAAAGGATAGACCAAGAACA---CAG-CGAATGCTGCAGACACTGGAGCAGAGTA 67954 ||||||| ||||| | |||||| | ||| || | |||||| || |||| || || Sbjct 14925009 TGACCGATTGGATAAATCAAGAAAAAAACAGTCGTA-GCTGCA---ACAAGAGCTGAATA 14924954 Query 67955 TGCTACACAGATCCAAGGACGCATACCAAGACGGTAAGAAAGTTCCCACTGACGACCACA 68014 ||| || |||||||| ||||||| | ||| || ||||||||||| ||||| Sbjct 14924953 TGCAACCGCAATCCAAGGGTGCATACCCAAACGAAAACTAAGTTCCCACTCGCGACCTAT 14924894 Query 68015 GTATGCTGTGATTCCGATAAGGAAGTGGAAGACTACAAGTTGGAAAGGTCCACCATTATA 68074 ||| | | || | | |||||| | || | |||| |||| || ||||| || Sbjct 14924893 GTAACAAGCTACACCAAGTAAGAAGTGTAGAACAATTAGTTAATAAGGACCGCCATTGTA 14924834 Query 68075 CAACCACTCATCTAGAGTTGCTGCTTCCCAGATAGGATAGAAGTGAAGACCGATTGCGTT 68134 ||||| ||||| | ||| ||||||| || | || ||||| ||| || || Sbjct 14924833 TAACCATTCATCAACGTATGCCACTTCCCATATCGAGTAAAAGTGCTAACCTATAGCCGC 14924774 Query 68135 TGAACTAGGAACAACAGCACCAGAAATGATGTTGTTACCGTACATGAGCGAACCTGCAAC 68194 || |||||| || |||||| ||||| || ||||| ||||| | || || || | || Sbjct 14924773 ATAAGTAGGAATAATAGCACCCGAAATAATATTGTTTCCGTAAAGTAGAGATCCAG-AAA 14924715 Query 68195 AGGTTCTCTGATACCATCGATATCAACTGGAGG 68227 ||| || | |||||||| ||||| |||||||| Sbjct 14924714 AGGCTCACGAATACCATCAATATCTACTGGAGG 14924682 >seq1 Length=36457581 Score = 113 bits (124), Expect = 5e-20 Identities = 166/234 (71%), Gaps = 6/234 (3%) Strand=Plus/Minus Query 67349 AGACTCAGCAGCAGCAAGGTCAAGAGGGAAGTTGTGAGCGTTACGCTCGTGCATAACTTC 67408 || ||| || || | ||||| ||||||||||| ||||| ||||| || ||||||||||| Sbjct 19599605 AGCCTCGGCCACAACTAGGTCTAGAGGGAAGTTATGAGCATTACGTTCATGCATAACTTC 19599546 Query 67409 CATTCCAAGTCCTGCTCTGTTAAGGATGTCTGCCCAAGTAGGAATCACTTTACCACCT-- 67466 ||| ||||| |||| ||| | || || ||||| || ||| || || |||| Sbjct 19599545 CATGCCAAGGTTAGCTCGGTTTATAATATCAGCCCATATATTAATTAC---ACGACCTTG 19599489 Query 67467 -GCGTCAACGACGGATTGGTTGAAGTTGAAACCGTTGAGGTTGAATGCCATAGTTGACAC 67525 ||||| | |||||||||||| |||||||| || | ||||| ||||| || Sbjct 19599488 ACTATCAACTATGGATTGGTTGAAATTGAAACCATTTAAATTGAAAGCCATGGTACTGGT 19599429 Query 67526 ACCCATTGCAGTGAACCAGATGCAGACCACAGGGAATGCAGCAAGGAAGAAGTG 67579 ||| | || || |||||||| | || ||||| | ||||| | ||||| || Sbjct 19599428 ACCTAACGCGGTAAACCAGATACCTACTACAGGCCAAGCAGCTAAAAAGAAATG 19599375 >seq5 Length=26376911 Score = 107 bits (118), Expect = 2e-18 Identities = 164/231 (71%), Gaps = 7/231 (3%) Strand=Plus/Plus Query 67349 AGACTCAGCAGCAGCAAGGTCAAGAGGGAAGTTGTGAGCGTTACGCTCGTGCATAACTTC 67408 || ||| || ||||| ||||| ||||||||||| ||||| ||| | || ||||||||||| Sbjct 10060233 AGCCTCGGCCGCAGCTAGGTCTAGAGGGAAGTTATGAGCATTATGTTCATGCATAACTTC 10060292 Query 67409 CATTCCAAGTCCTGCTCTGTTAAGGATGTCTGCCCAAGTAGGAATCACTTTACCACCT-- 67466 ||| ||||| |||| ||||| || | ||| ||| ||| || || |||| Sbjct 10060293 CATACCAAGGTTAGCTCGGTTAATAATAATAGTCCAGGTATTAATTAC---ACGACCTTG 10060349 Query 67467 -GCGTCAACGACGGATTGGTTGAAGTTGAAACCGTTGAGGTTGAATGCCATAGTTGACAC 67525 ||||| | |||||||||||| |||||||| || | ||||| | |||||| | Sbjct 10060350 ACTATCAACTATGGATTGGTTGAAATTGAAACCATTTAAATTGAAAGTCATAGTACTAAT 10060409 Query 67526 ACCCATTGCAGTGAACCAGATGCAGACCACAGGGAATGCAGCAAGGAAGAA 67576 ||| | ||| | ||||||| | || | ||| || ||||| || || || Sbjct 10060410 ACCTAATGCGATAAACCAGACACCTACTATAGGCAA-GCAGCTAGAAAAAA 10060459 >seq9 Length=21753712 Score = 105 bits (116), Expect = 8e-18 Identities = 160/225 (71%), Gaps = 7/225 (3%) Strand=Plus/Plus Query 67359 GCAGCAAGGTCAAGAGGGAAGTTGTGAGCGTTACGCTCGTGCATAACTTCCATTCCAAGT 67418 ||||| ||||| ||| ||||||| ||||| ||||| || || ||||||||||| ||||| Sbjct 18376386 GCAGCTAGGTCTAGATGGAAGTTATGAGCATTACGTTCATGTATAACTTCCATACCAAGG 18376445 Query 67419 CCTGCTCTGTTAAGGATGTCTGCCCAAGTAGGAATCACTTTACCACCT---GCGTCAACG 67475 |||| ||||| || || || || || ||| || || |||| ||||| Sbjct 18376446 TTAGCTCGGTTAATAATATCAGCTCAGATATTAATTAC---ACGACCTTGACTATCAACT 18376502 Query 67476 ACGGATTGGTTGAAGTTGAAACCGTTGAGGTTGAATGCCATAGTTGACACACCCATTGCA 67535 || |||||||||| |||||||| || | |||||| ||||| || | ||| | ||| Sbjct 18376503 ACATATTGGTTGAAATTGAAACCATTTAAGTTGAAAGCCATGGTGCTGATACCTAATGCG 18376562 Query 67536 G-TGAACCAGATGCAGACCACAGGGAATGCAGCAAGGAAGAAGTG 67579 | | |||||||| | || ||||| | || | || ||||| || Sbjct 18376563 GTTAAACCAGATACCTACTACAGGCCAAACAACTAGAAAGAAATG 18376607 >seq17 Length=21299880 Score = 104 bits (114), Expect = 3e-17 Identities = 131/179 (73%), Gaps = 1/179 (1%) Strand=Plus/Plus Query 67590 GAGTTGTTGAAAGATGCATACTGGAAGATCAAGCGACCGAAGTATCCATGAGCAGCAACA 67649 || || |||||| |||| ||||||||||| | || || || |||| |||||| ||| Sbjct 21194108 GAATTATTGAAACTATCATATTGGAAGATCAATCAGCCAAAATAACCATTAGCAGCTACA 21194167 Query 67650 ATGTTGTAAGTCTCTTCTTCTTGTCCGAACTTGTAACCGTAGTTCTGTGACTCTTGCTCA 67709 || || || | ||||| ||||| || || ||||||| | ||| | || | || Sbjct 21194168 ATATTATAGATTTCTTCCTCTTGACCAAATCTGTAACCTTCGTTAGCAAATTCATTTTCT 21194227 Query 67710 GTAGTTTCTCTGATAAGAGAAGAAGTAACAAGAGAACCGTGCATAGCACTAAAGAGTGA 67768 || ||||| ||||| | | ||||||| ||||| |||||||||||||||| || || || Sbjct 21194228 GTGGTTTCCCTGATCAAACTAGAAGTACCAAGA-AACCGTGCATAGCACTGAATAGGGA 21194285 Score = 89.7 bits (98), Expect = 6e-13 Identities = 85/109 (78%), Gaps = 0/109 (0%) Strand=Plus/Minus Query 67752 ATAGCACTAAAGAGTGAACCACCGAATACACCTGCTACTCCAAGCATATGGAATGGGTGC 67811 |||||||| || || || || ||||||||||| ||||| || | ||| || ||||| ||| Sbjct 19911066 ATAGCACTGAATAGGGAGCCGCCGAATACACCAGCTACGCCTAACATGTGAAATGGATGC 19911007 Query 67812 ATAAGGATGTTGTGCTCTGCTTGGAACACGAACATGTAGTTAAAAGTAC 67860 ||||| || |||||||| || || || || | ||| |||| |||| || Sbjct 19911006 ATAAGAATATTGTGCTCAGCCTGAAATACAATCATAAAGTTGAAAGCAC 19910958 >seq3662 Length=122019 Score = 96.9 bits (106), Expect = 4e-15 Identities = 150/213 (70%), Gaps = 6/213 (3%) Strand=Plus/Minus Query 67349 AGACTCAGCAGCAGCAAGGTCAAGAGGGAAGTTGTGAGCGTTACGCTCGTGCATAACTTC 67408 || ||| || ||||| ||||| | ||||||||| ||||| ||||| || || |||||||| Sbjct 4701 AGCCTCGGCCGCAGCTAGGTCTAAAGGGAAGTTATGAGCATTACGTTCATGTATAACTTC 4642 Query 67409 CATTCCAAGTCCTGCTCTGTTAAGGATGTCTGCCCAAGTAGGAATCACTTTACCACCT-- 67466 ||| ||||| |||| | ||| || || | | ||||| ||| || || |||| Sbjct 4641 CATACCAAGGTTAGCTCAGCTAATAATATCAGTCTAAGTATTAATTAC---ACGACCTTG 4585 Query 67467 -GCGTCAACGACGGATTGGTTGAAGTTGAAACCGTTGAGGTTGAATGCCATAGTTGACAC 67525 ||||| ||||||| ||||| || ||||| || | ||||| || ||||| | Sbjct 4584 ACAATCAACTACGGATTAATTGAAATTAAAACCATTTAAATTGAAAGCTATAGTACTGAT 4525 Query 67526 ACCCATTGCAGTGAACCAGATGCAGACCACAGG 67558 ||| | || | |||||||| | || ||||| Sbjct 4524 ACCTAACGCGATAAACCAGATACCTACTACAGG 4492 >seq3 Length=30153019 Score = 87.8 bits (96), Expect = 2e-12 Identities = 80/101 (79%), Gaps = 0/101 (0%) Strand=Plus/Plus Query 67356 GCAGCAGCAAGGTCAAGAGGGAAGTTGTGAGCGTTACGCTCGTGCATAACTTCCATTCCA 67415 || ||||| ||||| ||||||||||| ||||| ||||| || |||||||||||||| ||| Sbjct 15965265 GCCGCAGCGAGGTCTAGAGGGAAGTTATGAGCATTACGTTCATGCATAACTTCCATACCA 15965324 Query 67416 AGTCCTGCTCTGTTAAGGATGTCTGCCCAAGTAGGAATCAC 67456 | |||| ||||| || || ||||||||| ||| || Sbjct 15965325 ATGTTAGCTCGGTTAATAATATCAGCCCAAGTATTAATTAC 15965365 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 566851010320680