Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lupinus_20angustifolius_20[refseq_20GCF_5F001865875.1_202016-11-16] 13,573 sequences; 609,203,021 total letters Query= NC_021246.1 Length=281182 Score E Sequences producing significant alignments: (Bits) Value seq19 120 5e-22 seq6 113 8e-20 seq18 105 1e-17 seq17 96.9 6e-15 seq3 96.9 6e-15 seq4 93.3 8e-14 seq5 91.5 3e-13 >seq19 Length=18159812 Score = 120 bits (132), Expect = 5e-22 Identities = 158/219 (72%), Gaps = 0/219 (0%) Strand=Plus/Minus Query 193148 AAGTACCAGATGCAATGTAGCCTCTTTAGAAATATTATAGTCGGATAACGTTCTAGAATC 193207 ||| || ||||| | |||| || || |||||| || || | || ||||| ||| Sbjct 4557360 AAGAACAAGATGAAGAGTAGATTCCTTTTGAATATTGTAATCAGCTAGGGTTCTTCCATC 4557301 Query 193208 GTCTAATTGTTTTCCGGCAAAAATTAATCTCTGTTGATCAGGAGGTATTCCTTCTTTATC 193267 || | |||||| || || ||||| || | |||||||| || || | |||||||||||| Sbjct 4557300 TTCAAGTTGTTTACCAGCGAAAATCAAACGTTGTTGATCTGGTGGAACTCCTTCTTTATC 4557241 Query 193268 TTGTATTTTGGTTTTTATATTTAAAATAGTATCGGAAGACTCAACTTCTAGAGTTATAGT 193327 ||| || |||| ||| | ||| || || || ||||||||||| ||||| || Sbjct 4557240 TTGGATCTTGGCTTTCACATTGTCGATTGTGTCACTGCTTTCAACTTCTAGGGTTATTGT 4557181 Query 193328 TTTACCTGTTAGCGTTTTTACAAATATTTGCATTTTATT 193366 |||||| ||||| ||||| || || || |||||||| || Sbjct 4557180 TTTACCCGTTAGGGTTTTCACGAAGATCTGCATTTTTTT 4557142 >seq6 Length=33111450 Score = 113 bits (124), Expect = 8e-20 Identities = 163/230 (71%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 193131 ATACCACCTCTCAATCGAAGTACCAGATGCAATGTAGCCTCTTTAGAAATATTATAGTCG 193190 || || || ||||| || ||||||| ||| | |||| ||| || || ||||| || Sbjct 6669107 ATTCCTCCCCTCAAACGCAGTACCAAATGAAGAGTAGACTCCTTCTGGATGTTATAATCT 6669048 Query 193191 GATAACGTTCTAGAATCGTCTAATTGTTTTCCGGCAAAAATTAATCTCTGTTGATCAGGA 193250 | || || || ||| || | ||| ||||| ||||| || | ||||||||||| || Sbjct 6669047 GCCAAAGTCCTTCCATCTTCAAGTTGCTTTCCAGCAAATATAAGCCTCTGTTGATCTGGT 6668988 Query 193251 GGTATTCCTTCTTTATCTTGTATTTTGGTTTTTATATTTAAAATAGTATCGGAAGACTCA 193310 || || || || |||||||| || |||| || | ||| ||| || || ||| || Sbjct 6668987 GGAATACCCTCCTTATCTTGGATCTTGGCCTTAACATTGTCAATGGTGTCAGAACTTTCC 6668928 Query 193311 ACTTCTAGAGTTATAGTTTTACCTGTTAGCGTTTTTACAAATATTTGCAT 193360 || || || || || || || || ||||| ||||| ||||| |||||||| Sbjct 6668927 ACCTCAAGGGTGATGGTCTTGCCAGTTAGGGTTTTCACAAAGATTTGCAT 6668878 Score = 93.3 bits (102), Expect = 8e-14 Identities = 131/184 (71%), Gaps = 0/184 (0%) Strand=Plus/Minus Query 193178 AATATTATAGTCGGATAACGTTCTAGAATCGTCTAATTGTTTTCCGGCAAAAATTAATCT 193237 ||| |||||||| | | || || ||| || || ||||| || || || || || || Sbjct 6669288 AATGTTATAGTCAGCAAGAGTCCTTCCATCTTCCAACTGTTTCCCAGCGAAGATCAACCT 6669229 Query 193238 CTGTTGATCAGGAGGTATTCCTTCTTTATCTTGTATTTTGGTTTTTATATTTAAAATAGT 193297 ||||||||| || || || || || || ||||||||||| | || | ||| ||| || Sbjct 6669228 CTGTTGATCTGGTGGAATCCCCTCCTTGTCTTGTATTTTTGCCTTCACATTATCAATCGT 6669169 Query 193298 ATCGGAAGACTCAACTTCTAGAGTTATAGTTTTACCTGTTAGCGTTTTTACAAATATTTG 193357 || ||| ||| || || | || ||||| || || || || || || |||||||| || Sbjct 6669168 GTCAGAACTCTCCACCTCCAATGTAATAGTCTTCCCAGTCAGAGTCTTCACAAATATCTG 6669109 Query 193358 CATT 193361 |||| Sbjct 6669108 CATT 6669105 >seq18 Length=16588007 Score = 105 bits (116), Expect = 1e-17 Identities = 133/183 (73%), Gaps = 0/183 (0%) Strand=Plus/Plus Query 193178 AATATTATAGTCGGATAACGTTCTAGAATCGTCTAATTGTTTTCCGGCAAAAATTAATCT 193237 |||||| || |||| | || | | || || | |||||||||||| || || || | Sbjct 12189711 AATATTGTAATCGGCGAGAGTGCGACCGTCTTCGAGTTGTTTTCCGGCGAAGATCAAACG 12189770 Query 193238 CTGTTGATCAGGAGGTATTCCTTCTTTATCTTGTATTTTGGTTTTTATATTTAAAATAGT 193297 ||| || || || || |||||||| || ||||| || |||| || | ||| || || Sbjct 12189771 CTGCTGGTCCGGTGGAATTCCTTCCTTGTCTTGGATCTTGGCCTTGACATTGTCGATGGT 12189830 Query 193298 ATCGGAAGACTCAACTTCTAGAGTTATAGTTTTACCTGTTAGCGTTTTTACAAATATTTG 193357 |||||| || ||||| || || || || |||||||| ||||| ||||| || || || || Sbjct 12189831 ATCGGAGGATTCAACCTCGAGGGTAATGGTTTTACCCGTTAGGGTTTTCACGAAGATCTG 12189890 Query 193358 CAT 193360 ||| Sbjct 12189891 CAT 12189893 >seq17 Length=21299880 Score = 96.9 bits (106), Expect = 6e-15 Identities = 109/146 (75%), Gaps = 0/146 (0%) Strand=Plus/Minus Query 193215 TGTTTTCCGGCAAAAATTAATCTCTGTTGATCAGGAGGTATTCCTTCTTTATCTTGTATT 193274 ||||||||||| || || | | ||| || || || || |||||||| || ||||| || Sbjct 4984960 TGTTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGTGGGATTCCTTCCTTGTCTTGGATC 4984901 Query 193275 TTGGTTTTTATATTTAAAATAGTATCGGAAGACTCAACTTCTAGAGTTATAGTTTTACCT 193334 |||| || | ||| || |||||||| || |||||||| || || || ||||| || Sbjct 4984900 TTGGCCTTGACATTGTCGATGGTATCGGAGGATTCAACTTCGAGGGTGATGGTTTTCCCC 4984841 Query 193335 GTTAGCGTTTTTACAAATATTTGCAT 193360 ||||| ||||| || || || ||||| Sbjct 4984840 GTTAGGGTTTTCACGAAGATCTGCAT 4984815 >seq3 Length=30153019 Score = 96.9 bits (106), Expect = 6e-15 Identities = 109/146 (75%), Gaps = 0/146 (0%) Strand=Plus/Plus Query 193215 TGTTTTCCGGCAAAAATTAATCTCTGTTGATCAGGAGGTATTCCTTCTTTATCTTGTATT 193274 ||||||||||| || || | | ||| || || || || |||||||| || ||||| || Sbjct 15142574 TGTTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGTGGGATTCCTTCCTTGTCTTGGATC 15142633 Query 193275 TTGGTTTTTATATTTAAAATAGTATCGGAAGACTCAACTTCTAGAGTTATAGTTTTACCT 193334 |||| || | ||| || |||||||| || |||||||| || || || ||||| || Sbjct 15142634 TTGGCCTTGACATTGTCGATGGTATCGGAGGATTCAACTTCGAGGGTGATGGTTTTCCCC 15142693 Query 193335 GTTAGCGTTTTTACAAATATTTGCAT 193360 ||||| ||||| || || || ||||| Sbjct 15142694 GTTAGGGTTTTCACGAAGATCTGCAT 15142719 >seq4 Length=27333975 Score = 93.3 bits (102), Expect = 8e-14 Identities = 108/146 (74%), Gaps = 0/146 (0%) Strand=Plus/Minus Query 193215 TGTTTTCCGGCAAAAATTAATCTCTGTTGATCAGGAGGTATTCCTTCTTTATCTTGTATT 193274 ||||||||||| || || | | || || || || || |||||||| || ||||| || Sbjct 22406856 TGTTTTCCGGCGAAGATGAGGCGTTGCTGGTCCGGTGGAATTCCTTCCTTGTCTTGGATC 22406797 Query 193275 TTGGTTTTTATATTTAAAATAGTATCGGAAGACTCAACTTCTAGAGTTATAGTTTTACCT 193334 |||| || | ||| || || |||||||| ||||| || || ||||| || ||||| Sbjct 22406796 TTGGCCTTCACATTGTCGATTGTGTCGGAAGATTCAACCTCAAGGGTTATCGTCTTACCC 22406737 Query 193335 GTTAGCGTTTTTACAAATATTTGCAT 193360 ||||| ||||| || || || ||||| Sbjct 22406736 GTTAGGGTTTTCACGAAAATCTGCAT 22406711 Score = 89.7 bits (98), Expect = 9e-13 Identities = 129/182 (71%), Gaps = 0/182 (0%) Strand=Plus/Minus Query 193179 ATATTATAGTCGGATAACGTTCTAGAATCGTCTAATTGTTTTCCGGCAAAAATTAATCTC 193238 ||||| ||||||| | || | | || |||| ||||||||||| || || | | | Sbjct 24477343 ATATTGTAGTCGGCGAGGGTGCGACCGTCCTCTAGCTGTTTTCCGGCGAAGATCAGACGC 24477284 Query 193239 TGTTGATCAGGAGGTATTCCTTCTTTATCTTGTATTTTGGTTTTTATATTTAAAATAGTA 193298 || || ||||| || |||||||| || || || || || | ||||| || || || Sbjct 24477283 TGCTGGTCAGGTGGAATTCCTTCCTTGTCCTGAATCTTAGCTTTTACGTTATCGATTGTG 24477224 Query 193299 TCGGAAGACTCAACTTCTAGAGTTATAGTTTTACCTGTTAGCGTTTTTACAAATATTTGC 193358 ||||| ||| || ||||| || || || || || ||||| ||||| || || |||||| Sbjct 24477223 TCGGAGCTCTCCACCTCTAGGGTGATGGTCTTTCCGGTTAGGGTTTTCACGAAGATTTGC 24477164 Query 193359 AT 193360 || Sbjct 24477163 AT 24477162 >seq5 Length=26376911 Score = 91.5 bits (100), Expect = 3e-13 Identities = 158/230 (69%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 193131 ATACCACCTCTCAATCGAAGTACCAGATGCAATGTAGCCTCTTTAGAAATATTATAGTCG 193190 |||||||| | | ||||| || | ||| | || | || || || || ||||| Sbjct 2894149 ATACCACCACGAAGACGAAGCACTAAATGGAGAGTGGATTCCTTCTGGATGTTGTAGTCA 2894208 Query 193191 GATAACGTTCTAGAATCGTCTAATTGTTTTCCGGCAAAAATTAATCTCTGTTGATCAGGA 193250 | ||| || | ||| || | || || || ||||| || | ||||||||| || || Sbjct 2894209 GCTAAGGTCCGGCCATCCTCAAGCTGCTTGCCAGCAAAGATAAGTCTCTGTTGGTCGGGT 2894268 Query 193251 GGTATTCCTTCTTTATCTTGTATTTTGGTTTTTATATTTAAAATAGTATCGGAAGACTCA 193310 || || || ||||| ||||| ||||||| || | ||| || || || ||| |||| Sbjct 2894269 GGGATGCCCTCTTTGTCTTGAATTTTGGCCTTCACATTATCTATGGTGTCCGAACTCTCA 2894328 Query 193311 ACTTCTAGAGTTATAGTTTTACCTGTTAGCGTTTTTACAAATATTTGCAT 193360 ||||| || || || || || || || | || || |||||||||||||| Sbjct 2894329 ACTTCAAGTGTGATGGTCTTTCCGGTCAAGGTCTTGACAAATATTTGCAT 2894378 Score = 87.8 bits (96), Expect = 3e-12 Identities = 114/155 (74%), Gaps = 2/155 (1%) Strand=Plus/Minus Query 193206 TCGTCTAATTGTTTTCCGGCAAAAATTAATCTCTGTTGATCAGGAGGTATTCCTTCTTTA 193265 || || | |||||||||||| || || || ||| || || || || |||||||| || Sbjct 15676293 TCTTCGAGTTGTTTTCCGGCGAAGATCAAATGCTGCTGGTC-GGTGGAATTCCTTCCTTG 15676235 Query 193266 TCTTGTATTTTGGTTTTTATATTTAAAATAGTATCGGAAGACTCAACTTCTAGAGTTATA 193325 ||||| || |||| || | ||| || |||| ||| || ||||| || || || || Sbjct 15676234 TCTTGGATCTTGGCCTTGACATTGTCGATGGTATGGGAGGATTCAACCTCGAGGGTGATG 15676175 Query 193326 GTTTTACCTGTTAGCGTTTTTACAAATATTTGCAT 193360 |||||||| ||||| | ||| ||||| || ||||| Sbjct 15676174 GTTTTACCCGTTAG-GGTTTCACAAAGATCTGCAT 15676141 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 899501762385360