Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Lupinus_20angustifolius_20[refseq_20GCF_5F001865875.1_202016-11-16]
13,573 sequences; 609,203,021 total letters
Query= NC_021246.1
Length=281182
Score E
Sequences producing significant alignments: (Bits) Value
seq19 120 5e-22
seq6 113 8e-20
seq18 105 1e-17
seq17 96.9 6e-15
seq3 96.9 6e-15
seq4 93.3 8e-14
seq5 91.5 3e-13
>seq19
Length=18159812
Score = 120 bits (132), Expect = 5e-22
Identities = 158/219 (72%), Gaps = 0/219 (0%)
Strand=Plus/Minus
Query 193148 AAGTACCAGATGCAATGTAGCCTCTTTAGAAATATTATAGTCGGATAACGTTCTAGAATC 193207
||| || ||||| | |||| || || |||||| || || | || ||||| |||
Sbjct 4557360 AAGAACAAGATGAAGAGTAGATTCCTTTTGAATATTGTAATCAGCTAGGGTTCTTCCATC 4557301
Query 193208 GTCTAATTGTTTTCCGGCAAAAATTAATCTCTGTTGATCAGGAGGTATTCCTTCTTTATC 193267
|| | |||||| || || ||||| || | |||||||| || || | ||||||||||||
Sbjct 4557300 TTCAAGTTGTTTACCAGCGAAAATCAAACGTTGTTGATCTGGTGGAACTCCTTCTTTATC 4557241
Query 193268 TTGTATTTTGGTTTTTATATTTAAAATAGTATCGGAAGACTCAACTTCTAGAGTTATAGT 193327
||| || |||| ||| | ||| || || || ||||||||||| ||||| ||
Sbjct 4557240 TTGGATCTTGGCTTTCACATTGTCGATTGTGTCACTGCTTTCAACTTCTAGGGTTATTGT 4557181
Query 193328 TTTACCTGTTAGCGTTTTTACAAATATTTGCATTTTATT 193366
|||||| ||||| ||||| || || || |||||||| ||
Sbjct 4557180 TTTACCCGTTAGGGTTTTCACGAAGATCTGCATTTTTTT 4557142
>seq6
Length=33111450
Score = 113 bits (124), Expect = 8e-20
Identities = 163/230 (71%), Gaps = 0/230 (0%)
Strand=Plus/Minus
Query 193131 ATACCACCTCTCAATCGAAGTACCAGATGCAATGTAGCCTCTTTAGAAATATTATAGTCG 193190
|| || || ||||| || ||||||| ||| | |||| ||| || || ||||| ||
Sbjct 6669107 ATTCCTCCCCTCAAACGCAGTACCAAATGAAGAGTAGACTCCTTCTGGATGTTATAATCT 6669048
Query 193191 GATAACGTTCTAGAATCGTCTAATTGTTTTCCGGCAAAAATTAATCTCTGTTGATCAGGA 193250
| || || || ||| || | ||| ||||| ||||| || | ||||||||||| ||
Sbjct 6669047 GCCAAAGTCCTTCCATCTTCAAGTTGCTTTCCAGCAAATATAAGCCTCTGTTGATCTGGT 6668988
Query 193251 GGTATTCCTTCTTTATCTTGTATTTTGGTTTTTATATTTAAAATAGTATCGGAAGACTCA 193310
|| || || || |||||||| || |||| || | ||| ||| || || ||| ||
Sbjct 6668987 GGAATACCCTCCTTATCTTGGATCTTGGCCTTAACATTGTCAATGGTGTCAGAACTTTCC 6668928
Query 193311 ACTTCTAGAGTTATAGTTTTACCTGTTAGCGTTTTTACAAATATTTGCAT 193360
|| || || || || || || || ||||| ||||| ||||| ||||||||
Sbjct 6668927 ACCTCAAGGGTGATGGTCTTGCCAGTTAGGGTTTTCACAAAGATTTGCAT 6668878
Score = 93.3 bits (102), Expect = 8e-14
Identities = 131/184 (71%), Gaps = 0/184 (0%)
Strand=Plus/Minus
Query 193178 AATATTATAGTCGGATAACGTTCTAGAATCGTCTAATTGTTTTCCGGCAAAAATTAATCT 193237
||| |||||||| | | || || ||| || || ||||| || || || || || ||
Sbjct 6669288 AATGTTATAGTCAGCAAGAGTCCTTCCATCTTCCAACTGTTTCCCAGCGAAGATCAACCT 6669229
Query 193238 CTGTTGATCAGGAGGTATTCCTTCTTTATCTTGTATTTTGGTTTTTATATTTAAAATAGT 193297
||||||||| || || || || || || ||||||||||| | || | ||| ||| ||
Sbjct 6669228 CTGTTGATCTGGTGGAATCCCCTCCTTGTCTTGTATTTTTGCCTTCACATTATCAATCGT 6669169
Query 193298 ATCGGAAGACTCAACTTCTAGAGTTATAGTTTTACCTGTTAGCGTTTTTACAAATATTTG 193357
|| ||| ||| || || | || ||||| || || || || || || |||||||| ||
Sbjct 6669168 GTCAGAACTCTCCACCTCCAATGTAATAGTCTTCCCAGTCAGAGTCTTCACAAATATCTG 6669109
Query 193358 CATT 193361
||||
Sbjct 6669108 CATT 6669105
>seq18
Length=16588007
Score = 105 bits (116), Expect = 1e-17
Identities = 133/183 (73%), Gaps = 0/183 (0%)
Strand=Plus/Plus
Query 193178 AATATTATAGTCGGATAACGTTCTAGAATCGTCTAATTGTTTTCCGGCAAAAATTAATCT 193237
|||||| || |||| | || | | || || | |||||||||||| || || || |
Sbjct 12189711 AATATTGTAATCGGCGAGAGTGCGACCGTCTTCGAGTTGTTTTCCGGCGAAGATCAAACG 12189770
Query 193238 CTGTTGATCAGGAGGTATTCCTTCTTTATCTTGTATTTTGGTTTTTATATTTAAAATAGT 193297
||| || || || || |||||||| || ||||| || |||| || | ||| || ||
Sbjct 12189771 CTGCTGGTCCGGTGGAATTCCTTCCTTGTCTTGGATCTTGGCCTTGACATTGTCGATGGT 12189830
Query 193298 ATCGGAAGACTCAACTTCTAGAGTTATAGTTTTACCTGTTAGCGTTTTTACAAATATTTG 193357
|||||| || ||||| || || || || |||||||| ||||| ||||| || || || ||
Sbjct 12189831 ATCGGAGGATTCAACCTCGAGGGTAATGGTTTTACCCGTTAGGGTTTTCACGAAGATCTG 12189890
Query 193358 CAT 193360
|||
Sbjct 12189891 CAT 12189893
>seq17
Length=21299880
Score = 96.9 bits (106), Expect = 6e-15
Identities = 109/146 (75%), Gaps = 0/146 (0%)
Strand=Plus/Minus
Query 193215 TGTTTTCCGGCAAAAATTAATCTCTGTTGATCAGGAGGTATTCCTTCTTTATCTTGTATT 193274
||||||||||| || || | | ||| || || || || |||||||| || ||||| ||
Sbjct 4984960 TGTTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGTGGGATTCCTTCCTTGTCTTGGATC 4984901
Query 193275 TTGGTTTTTATATTTAAAATAGTATCGGAAGACTCAACTTCTAGAGTTATAGTTTTACCT 193334
|||| || | ||| || |||||||| || |||||||| || || || ||||| ||
Sbjct 4984900 TTGGCCTTGACATTGTCGATGGTATCGGAGGATTCAACTTCGAGGGTGATGGTTTTCCCC 4984841
Query 193335 GTTAGCGTTTTTACAAATATTTGCAT 193360
||||| ||||| || || || |||||
Sbjct 4984840 GTTAGGGTTTTCACGAAGATCTGCAT 4984815
>seq3
Length=30153019
Score = 96.9 bits (106), Expect = 6e-15
Identities = 109/146 (75%), Gaps = 0/146 (0%)
Strand=Plus/Plus
Query 193215 TGTTTTCCGGCAAAAATTAATCTCTGTTGATCAGGAGGTATTCCTTCTTTATCTTGTATT 193274
||||||||||| || || | | ||| || || || || |||||||| || ||||| ||
Sbjct 15142574 TGTTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGTGGGATTCCTTCCTTGTCTTGGATC 15142633
Query 193275 TTGGTTTTTATATTTAAAATAGTATCGGAAGACTCAACTTCTAGAGTTATAGTTTTACCT 193334
|||| || | ||| || |||||||| || |||||||| || || || ||||| ||
Sbjct 15142634 TTGGCCTTGACATTGTCGATGGTATCGGAGGATTCAACTTCGAGGGTGATGGTTTTCCCC 15142693
Query 193335 GTTAGCGTTTTTACAAATATTTGCAT 193360
||||| ||||| || || || |||||
Sbjct 15142694 GTTAGGGTTTTCACGAAGATCTGCAT 15142719
>seq4
Length=27333975
Score = 93.3 bits (102), Expect = 8e-14
Identities = 108/146 (74%), Gaps = 0/146 (0%)
Strand=Plus/Minus
Query 193215 TGTTTTCCGGCAAAAATTAATCTCTGTTGATCAGGAGGTATTCCTTCTTTATCTTGTATT 193274
||||||||||| || || | | || || || || || |||||||| || ||||| ||
Sbjct 22406856 TGTTTTCCGGCGAAGATGAGGCGTTGCTGGTCCGGTGGAATTCCTTCCTTGTCTTGGATC 22406797
Query 193275 TTGGTTTTTATATTTAAAATAGTATCGGAAGACTCAACTTCTAGAGTTATAGTTTTACCT 193334
|||| || | ||| || || |||||||| ||||| || || ||||| || |||||
Sbjct 22406796 TTGGCCTTCACATTGTCGATTGTGTCGGAAGATTCAACCTCAAGGGTTATCGTCTTACCC 22406737
Query 193335 GTTAGCGTTTTTACAAATATTTGCAT 193360
||||| ||||| || || || |||||
Sbjct 22406736 GTTAGGGTTTTCACGAAAATCTGCAT 22406711
Score = 89.7 bits (98), Expect = 9e-13
Identities = 129/182 (71%), Gaps = 0/182 (0%)
Strand=Plus/Minus
Query 193179 ATATTATAGTCGGATAACGTTCTAGAATCGTCTAATTGTTTTCCGGCAAAAATTAATCTC 193238
||||| ||||||| | || | | || |||| ||||||||||| || || | | |
Sbjct 24477343 ATATTGTAGTCGGCGAGGGTGCGACCGTCCTCTAGCTGTTTTCCGGCGAAGATCAGACGC 24477284
Query 193239 TGTTGATCAGGAGGTATTCCTTCTTTATCTTGTATTTTGGTTTTTATATTTAAAATAGTA 193298
|| || ||||| || |||||||| || || || || || | ||||| || || ||
Sbjct 24477283 TGCTGGTCAGGTGGAATTCCTTCCTTGTCCTGAATCTTAGCTTTTACGTTATCGATTGTG 24477224
Query 193299 TCGGAAGACTCAACTTCTAGAGTTATAGTTTTACCTGTTAGCGTTTTTACAAATATTTGC 193358
||||| ||| || ||||| || || || || || ||||| ||||| || || ||||||
Sbjct 24477223 TCGGAGCTCTCCACCTCTAGGGTGATGGTCTTTCCGGTTAGGGTTTTCACGAAGATTTGC 24477164
Query 193359 AT 193360
||
Sbjct 24477163 AT 24477162
>seq5
Length=26376911
Score = 91.5 bits (100), Expect = 3e-13
Identities = 158/230 (69%), Gaps = 0/230 (0%)
Strand=Plus/Plus
Query 193131 ATACCACCTCTCAATCGAAGTACCAGATGCAATGTAGCCTCTTTAGAAATATTATAGTCG 193190
|||||||| | | ||||| || | ||| | || | || || || || |||||
Sbjct 2894149 ATACCACCACGAAGACGAAGCACTAAATGGAGAGTGGATTCCTTCTGGATGTTGTAGTCA 2894208
Query 193191 GATAACGTTCTAGAATCGTCTAATTGTTTTCCGGCAAAAATTAATCTCTGTTGATCAGGA 193250
| ||| || | ||| || | || || || ||||| || | ||||||||| || ||
Sbjct 2894209 GCTAAGGTCCGGCCATCCTCAAGCTGCTTGCCAGCAAAGATAAGTCTCTGTTGGTCGGGT 2894268
Query 193251 GGTATTCCTTCTTTATCTTGTATTTTGGTTTTTATATTTAAAATAGTATCGGAAGACTCA 193310
|| || || ||||| ||||| ||||||| || | ||| || || || ||| ||||
Sbjct 2894269 GGGATGCCCTCTTTGTCTTGAATTTTGGCCTTCACATTATCTATGGTGTCCGAACTCTCA 2894328
Query 193311 ACTTCTAGAGTTATAGTTTTACCTGTTAGCGTTTTTACAAATATTTGCAT 193360
||||| || || || || || || || | || || ||||||||||||||
Sbjct 2894329 ACTTCAAGTGTGATGGTCTTTCCGGTCAAGGTCTTGACAAATATTTGCAT 2894378
Score = 87.8 bits (96), Expect = 3e-12
Identities = 114/155 (74%), Gaps = 2/155 (1%)
Strand=Plus/Minus
Query 193206 TCGTCTAATTGTTTTCCGGCAAAAATTAATCTCTGTTGATCAGGAGGTATTCCTTCTTTA 193265
|| || | |||||||||||| || || || ||| || || || || |||||||| ||
Sbjct 15676293 TCTTCGAGTTGTTTTCCGGCGAAGATCAAATGCTGCTGGTC-GGTGGAATTCCTTCCTTG 15676235
Query 193266 TCTTGTATTTTGGTTTTTATATTTAAAATAGTATCGGAAGACTCAACTTCTAGAGTTATA 193325
||||| || |||| || | ||| || |||| ||| || ||||| || || || ||
Sbjct 15676234 TCTTGGATCTTGGCCTTGACATTGTCGATGGTATGGGAGGATTCAACCTCGAGGGTGATG 15676175
Query 193326 GTTTTACCTGTTAGCGTTTTTACAAATATTTGCAT 193360
|||||||| ||||| | ||| ||||| || |||||
Sbjct 15676174 GTTTTACCCGTTAG-GGTTTCACAAAGATCTGCAT 15676141
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 899501762385360
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |