Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Lupinus_20angustifolius_20[refseq_20GCF_5F001865875.1_202016-11-16]
13,573 sequences; 609,203,021 total letters
Query= NC_021247.1
Length=228750
Score E
Sequences producing significant alignments: (Bits) Value
seq2 123 4e-23
seq4 118 2e-21
seq9 114 2e-20
seq12525 102 1e-16
seq6 98.7 1e-15
seq19 95.1 2e-14
seq5 95.1 2e-14
>seq2
Length=24697652
Score = 123 bits (136), Expect = 4e-23
Identities = 362/558 (65%), Gaps = 7/558 (1%)
Strand=Plus/Plus
Query 18149 TATAATAAACACGCAAAATCAGTGTGTAAACCTTCATCTCTGGATATTAATTCGTTACTA 18208
|| || || ||||| |||||| ||||||||| ||||||| || ||||| |||||
Sbjct 21046904 TACAACAAGCACGCGAAATCACAGTGTAAACCCTCATCTCGCGAGATTAACTCGTTTGAG 21046963
Query 18209 AACGTTAACCCGGGCATTATACCTCttttttttAGCCAAAATATCGATGCGAAACTACTA 18268
|| || | || ||||| | |||| ||| || | ||||||||||| ||| || | |
Sbjct 21046964 AAGGTAAGACCAGGCATAAGGCCTCGTTTCTTCAACCAAAATATCGCACAGAAGCTTCCA 21047023
Query 18269 GAAAAGAATATACCCTCAACGCACGCGAACGCTATTAATCTTTCAGCAAAACTGTATTTA 18328
|| ||||| ||||| ||||| || || ||||| | | | |||||| || | |||
Sbjct 21047024 GAGAAGAAAATACCTTCAACACAAGCAAACGCAACGAGACGTTCAGCGAA---GGATT-- 21047078
Query 18329 TTGCTCAGT--ATCCATTTTTGTGCCCATTCTCCTTNNNNNNNNATACACGGTATACTCT 18386
|| | || ||||| | ||||| || ||| | || ||||| |||
Sbjct 21047079 CTGAACCGTCGATCCAACGAAGCGCCCACTCAGCTTTTTTAGCAACGCAAGGTATCGTCT 21047138
Query 18387 CTATAGCATTAAACAAATCATCTTTTTCTTTGGAATCTTTTATATAAGTGTCGATTAACA 18446
|||| || | || || || ||| || ||||||||| ||||| || || | | |
Sbjct 21047139 CTATTGCGTGGAATAATCGATTTTTATCAGCGGAATCTTTGATATACGTTTCAAGAAGGA 21047198
Query 18447 AAGAATACATTTCAGAATGTATGCTTTCCATAGCTATCTGAAAACTATAAAACGATCTAG 18506
| |||||| |||||||| || | || || || ||||| || | || || | | |
Sbjct 21047199 GACTATACATCTCAGAATGGATATTCTCGATTGCGATCTGGAAGCCGTAGAATGCACGCG 21047258
Query 18507 CCTCGGGATATTGAATCTCGCTATAAAATCTTTCTACCAAATTCTCATTAACTATACCGT 18566
|||| | ||| ||||| | || ||| | | | || ||| || || ||||
Sbjct 21047259 CCTCAGCGACTTGTATCTCTGTCATGAACCTTCCGGCGAGGTTTTCAAGGACGATTCCGT 21047318
Query 18567 CAGCAGATGCGAAAAATGCCAAAACATATTTAATGAAATGTTTTTCATTATCCTTGAGAT 18626
| | || ||||| || || | | | ||| ||||| || ||| || ||||
Sbjct 21047319 CGGAAGCGGCGAAGAAAGCGAGGATGTGTTTGATGAAGTGGCGTTCGCCGTCGGTGAGGG 21047378
Query 18627 TGTTCCATTCATCTATATCTTTTGATAGATCAACTTCTTCCGATGTCCAAAAAGATGATT 18686
|| ||| | | ||||| || ||||| |||||||| | ||||| || || | ||
Sbjct 21047379 AGTCCCAGTGGCGGAGATCTTGAGAGAGATCGACTTCTTCGGCGGTCCAGAATGAAGCTT 21047438
Query 18687 CGGCCTGTTTGTACATTT 18704
| || | |||||||||||
Sbjct 21047439 CTGCTTTTTTGTACATTT 21047456
>seq4
Length=27333975
Score = 118 bits (130), Expect = 2e-21
Identities = 148/203 (73%), Gaps = 0/203 (0%)
Strand=Plus/Plus
Query 155823 ATGCAAATATTTATTAAAACATTGACTGGAAAAACTATTACATTAGAAGTCGAAGATTCT 155882
||||| || ||| | || || |||||||| ||||| ||||| || || || ||| ||||
Sbjct 24477618 ATGCAGATTTTTGTGAAGACTTTGACTGGGAAAACCATTACTTTGGAGGTGGAAAGTTCT 24477677
Query 155883 GATAATATTTTAAACGTGAAAAATAAAATACAAGATAAAGAAGGCATACCTCCAGAACAA 155942
|||| ||| || |||||| ||| || || ||||| ||||| || || || || ||
Sbjct 24477678 GATACAATTGATAATGTGAAAGCTAAGATTCAGGATAAGGAAGGTATTCCACCGGATCAG 24477737
Query 155943 CAAAGATTGATTTATGCCGGTAAGCAGCTCGAAGATACCAGAACTTTATCAGATTATAAT 156002
|| || ||||||| ||| || ||||| | |||||| || ||||| | |||||||||
Sbjct 24477738 CAGAGGTTGATTTTTGCAGGGAAGCAATTAGAAGATGGAAGGACTTTGGCTGATTATAAT 24477797
Query 156003 ATATCCAAAGAGGCGACGCTTCA 156025
|| || ||| | || |||||
Sbjct 24477798 ATTCAGAAGGAGTCTACTCTTCA 24477820
Score = 93.3 bits (102), Expect = 6e-14
Identities = 150/216 (69%), Gaps = 0/216 (0%)
Strand=Plus/Plus
Query 155822 AATGCAAATATTTATTAAAACATTGACTGGAAAAACTATTACATTAGAAGTCGAAGATTC 155881
||||||||| || | ||||| | || || ||||| || || ||||||| || |||
Sbjct 24477389 AATGCAAATCTTCGTAAAAACCCTCACCGGCAAAACCATAACCCTAGAAGTGGAGAGTTC 24477448
Query 155882 TGATAATATTTTAAACGTGAAAAATAAAATACAAGATAAAGAAGGCATACCTCCAGAACA 155941
|| | || ||||| || || || |||||||| ||||| || || ||||| ||
Sbjct 24477449 CGACACCATCGACAACGTAAAGGCGAAGATTCAAGATAAGGAAGGAATTCCACCAGATCA 24477508
Query 155942 ACAAAGATTGATTTATGCCGGTAAGCAGCTCGAAGATACCAGAACTTTATCAGATTATAA 156001
|| |||||||||| || || || || || |||||| ||||| || | ||||||||
Sbjct 24477509 GCAGAGATTGATTTTCGCTGGAAAACAACTTGAAGATGGAAGAACCCTAGCTGATTATAA 24477568
Query 156002 TATATCCAAAGAGGCGACGCTTCATTTAGTGTTAAG 156037
||| || || | || ||||| | ||||| ||
Sbjct 24477569 TATCCAGAAGGAATCAACACTTCACCTTGTGTTGAG 24477604
>seq9
Length=21753712
Score = 114 bits (126), Expect = 2e-20
Identities = 360/558 (65%), Gaps = 7/558 (1%)
Strand=Plus/Plus
Query 18149 TATAATAAACACGCAAAATCAGTGTGTAAACCTTCATCTCTGGATATTAATTCGTTACTA 18208
||||||||||| || |||||| || | |||||||||| ||||| || |||||
Sbjct 19303911 TATAATAAACAAGCGAAATCACAATGAAGCCCTTCATCTCGCGATATCAACTCGTTCGAG 19303970
Query 18209 AACGTTAACCCGGGCATTATACCTCttttttttAGCCAAAATATCGATGCGAAACTACTA 18268
|| || | |||||||||| || | |||||| ||||||||||||| ||| || | |
Sbjct 19303971 AATGTAAGACCGGGCATTAACCCGCGTTTTTTAAGCCAAAATATCGCACAGAAGCTTCCA 19304030
Query 18269 GAAAAGAATATACCCTCAACGCACGCGAACGCTATTAATCTTTCAGCAAAACTGTATTTA 18328
|| || ||||| || |||||||| || || || | | | ||| || || | |||
Sbjct 19304031 GAGAAAAATATTCCTTCAACGCAAGCAAAAGCAACGAGGCGTTCTGCGAA---GGATT-- 19304085
Query 18329 TTGCTCAGT--ATCCATTTTTGTGCCCATTCTCCTTNNNNNNNNATACACGGTATACTCT 18386
|| | || |||||| | |||||||| ||| | ||| || || | |
Sbjct 19304086 CTGAACCGTCGATCCATCGTAACGCCCATTCAGCTTTCTTTGTAACACAAGGAATGGTTT 19304145
Query 18387 CTATAGCATTAAACAAATCATCTTTTTCTTTGGAATCTTTTATATAAGTGTCGATTAACA 18446
| || || | || || | ||| || ||| ||||| ||||| || |||| | |
Sbjct 19304146 CAATCGCGTGGAATAATCGGTTTTTATCAGCGGAGTCTTTGATATATGTTTCGAGAAGGA 19304205
Query 18447 AAGAATACATTTCAGAATGTATGCTTTCCATAGCTATCTGAAAACTATAAAACGATCTAG 18506
|||||| ||||| || || |||| || || || || || | || || | | |
Sbjct 19304206 GGCTATACATCTCAGAGTGGATATTTTCAATGGCGATTTGGAAGCCGTAGAAAGCACGCG 19304265
Query 18507 CCTCGGGATATTGAATCTCGCTATAAAATCTTTCTACCAAATTCTCATTAACTATACCGT 18566
|||| | |||||| | | || ||| | | | || ||| ||| || ||||
Sbjct 19304266 CCTCAGCGACTTGAATTTGAGTCATGAACCTTCCGGCGAGGTTTTCAAGAACGATTCCGT 19304325
Query 18567 CAGCAGATGCGAAAAATGCCAAAACATATTTAATGAAATGTTTTTCATTATCCTTGAGAT 18626
| | | ||||| || || | | | ||| ||||| || ||||| || |||||
Sbjct 19304326 CGGAGGCGGCGAAGAAGGCGAGGATGTGTTTGATGAAGTGGCGTTCATCGTCGGTGAGAG 19304385
Query 18627 TGTTCCATTCATCTATATCTTTTGATAGATCAACTTCTTCCGATGTCCAAAAAGATGATT 18686
| ||| | | ||||| || ||||| |||||||| | ||||| || || | ||
Sbjct 19304386 AATCCCAATGGCGAAGATCTTGAGAAAGATCGACTTCTTCGGCGGTCCAGAATGAAGCTT 19304445
Query 18687 CGGCCTGTTTGTACATTT 18704
|||| | ||||||||||
Sbjct 19304446 CGGCTTTCTTGTACATTT 19304463
>seq12525
Length=279716
Score = 102 bits (112), Expect = 1e-16
Identities = 116/156 (74%), Gaps = 0/156 (0%)
Strand=Plus/Plus
Query 155823 ATGCAAATATTTATTAAAACATTGACTGGAAAAACTATTACATTAGAAGTCGAAGATTCT 155882
||||| || ||| | || || |||||||| ||||||||||| | || || || |||
Sbjct 230477 ATGCAGATTTTTGTGAAGACCTTGACTGGGAAAACTATTACTCTTGAGGTTGAGAGTTCG 230536
Query 155883 GATAATATTTTAAACGTGAAAAATAAAATACAAGATAAAGAAGGCATACCTCCAGAACAA 155942
|||| |||| || ||||| || || || ||||| ||||| || || ||||| |||
Sbjct 230537 GATACTATTGATAATGTGAAGGCAAAGATTCAGGATAAGGAAGGAATCCCCCCAGACCAA 230596
Query 155943 CAAAGATTGATTTATGCCGGTAAGCAGCTCGAAGAT 155978
|| || ||||| | ||| || |||||||| ||||||
Sbjct 230597 CAGAGGTTGATCTTTGCTGGAAAGCAGCTTGAAGAT 230632
>seq6
Length=33111450
Score = 98.7 bits (108), Expect = 1e-15
Identities = 144/204 (71%), Gaps = 0/204 (0%)
Strand=Plus/Plus
Query 155822 AATGCAAATATTTATTAAAACATTGACTGGAAAAACTATTACATTAGAAGTCGAAGATTC 155881
|||||| |||||| | || || ||||||| || ||||||||||| || || || |||
Sbjct 6669105 AATGCAGATATTTGTGAAGACTCTGACTGGGAAGACTATTACATTGGAGGTGGAGAGTTC 6669164
Query 155882 TGATAATATTTTAAACGTGAAAAATAAAATACAAGATAAAGAAGGCATACCTCCAGAACA 155941
||| | ||| || ||||| ||||||||||| || || || || || ||||| ||
Sbjct 6669165 TGACACGATTGATAATGTGAAGGCAAAAATACAAGACAAGGAGGGGATTCCACCAGATCA 6669224
Query 155942 ACAAAGATTGATTTATGCCGGTAAGCAGCTCGAAGATACCAGAACTTTATCAGATTATAA 156001
||| || ||||| | || || || ||| | |||||| || ||| | | || |||||
Sbjct 6669225 ACAGAGGTTGATCTTCGCTGGGAAACAGTTGGAAGATGGAAGGACTCTTGCTGACTATAA 6669284
Query 156002 TATATCCAAAGAGGCGACGCTTCA 156025
|| || ||| | || |||||
Sbjct 6669285 CATTCAGAAGGAGTCAACTCTTCA 6669308
>seq19
Length=18159812
Score = 95.1 bits (104), Expect = 2e-14
Identities = 149/211 (71%), Gaps = 2/211 (1%)
Strand=Plus/Plus
Query 155817 AATAAAATGCAAATATTTATTAAAACATTGACTGGAAAAACTATTACATTAGAAGTCGAA 155876
|| |||||||| || || | ||||| | || || ||||| || || ||||||| |||
Sbjct 4557142 AAAAAAATGCAGATCTTCGTGAAAACCCTAACGGGTAAAACAATAACCCTAGAAGTTGAA 4557201
Query 155877 GATTCTGATAATATTTTAAACGTGAAAAATAAAATACAAGATAAAGAAGGCATACCTCCA 155936
||| | || || |||||| || || |||||||||||||| | || |||
Sbjct 4557202 AGCAGTGACACAATCGACAATGTGAAAGCCAAGATCCAAGATAAAGAAGGAGTTCCACCA 4557261
Query 155937 GAACAACAAAGATTGATTTATGCCGGTAAGCAGCTCGAAGATACCAGAACTTTATCAGAT 155996
|| |||||| | ||||||| || ||||| || || |||||| ||||| || | |||
Sbjct 4557262 GATCAACAACGTTTGATTTTCGCTGGTAAACAACTTGAAGATGGAAGAACCCTAGCTGAT 4557321
Query 155997 TATAATATATCCAAA-GAGGCGACGCTTCAT 156026
|| ||||| || ||| || | || ||||||
Sbjct 4557322 TACAATAT-TCAAAAGGAATCTACTCTTCAT 4557351
>seq5
Length=26376911
Score = 95.1 bits (104), Expect = 2e-14
Identities = 147/210 (70%), Gaps = 0/210 (0%)
Strand=Plus/Minus
Query 155823 ATGCAAATATTTATTAAAACATTGACTGGAAAAACTATTACATTAGAAGTCGAAGATTCT 155882
|||||||||||| | || || ||||| ||||| || || ||| | ||||| || |||
Sbjct 2894378 ATGCAAATATTTGTCAAGACCTTGACCGGAAAGACCATCACACTTGAAGTTGAGAGTTCG 2894319
Query 155883 GATAATATTTTAAACGTGAAAAATAAAATACAAGATAAAGAAGGCATACCTCCAGAACAA 155942
|| | || || ||||| ||||| ||||| ||||| ||||| || || || |||
Sbjct 2894318 GACACCATAGATAATGTGAAGGCCAAAATTCAAGACAAAGAGGGCATCCCACCCGACCAA 2894259
Query 155943 CAAAGATTGATTTATGCCGGTAAGCAGCTCGAAGATACCAGAACTTTATCAGATTATAAT 156002
|| ||| | || | ||| || |||||||| || ||| | | || ||| | || || ||
Sbjct 2894258 CAGAGACTTATCTTTGCTGGCAAGCAGCTTGAGGATGGCCGGACCTTAGCTGACTACAAC 2894199
Query 156003 ATATCCAAAGAGGCGACGCTTCATTTAGTG 156032
|| || || | || || |||||||||
Sbjct 2894198 ATCCAGAAGGAATCCACTCTCCATTTAGTG 2894169
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 731747828766800
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