Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Lupinus_20angustifolius_20[refseq_20GCF_5F001865875.1_202016-11-16]
13,573 sequences; 609,203,021 total letters
Query= NC_021312.1
Length=459984
Score E
Sequences producing significant alignments: (Bits) Value
seq12 147 6e-30
seq7 131 5e-25
seq13 122 3e-22
seq15 120 9e-22
seq8 113 1e-19
seq1 107 6e-18
seq11 95.1 4e-14
seq5 86.0 2e-11
>seq12
Length=19065701
Score = 147 bits (162), Expect = 6e-30
Identities = 344/508 (68%), Gaps = 16/508 (3%)
Strand=Plus/Plus
Query 288850 CTATCAAACCTACCAGAACGAGTTAATGCTGGGTCTAATATATCGGCTCTGTTTGTTGCT 288909
|| ||||||| ||| | | ||| || | ||| | || ||||||||||| ||||||
Sbjct 8127036 CTGTCAAACCGACCCGGTCTCAATAAGGCAGAGTCAAGAATGTCGGCTCTGTTAGTTGCT 8127095
Query 288910 GCCAATACAACAATAGATTCG-GTTTG---CTTAAATCCATCCATACTTGTTAAAATTTG 288965
|| | ||||||| ||| | || | || ||| |||||||| ||| |||| |||
Sbjct 8127096 GCAA---CAACAAT-GATACCAGTATTACCCTCAAACCCATCCATTTCTGTCAAAAGTTG 8127151
Query 288966 ATTAAGTGTTTGTTCCCTTTCATCATTTGAACCTCTTGAATCACCCGAATCGCTCCtttt 289025
|| || || ||||| ||||||||||| |||| ||| ||| || ||| || |
Sbjct 8127152 GTTGAGGGTCTGTTCTCTTTCATCATTCCCTCCTCC--AATT--CCGG-TCCCTCTTTGT 8127206
Query 289026 tttACCAACAGCATCAATTTCGTCAATGAAAATCACACACGGAGAATTTTGTCTCGCAAT 289085
|| ||||||||||||||||| |||| ||| | | ||| || | ||| | | | || |
Sbjct 8127207 CTT-CCAACAGCATCAATTTCATCAACGAACACAATACATGGGGCATTCTCTTTGGCCTT 8127265
Query 289086 TGCAAATAATTCTCTTACACGGGATGCTCCAAGACCAACATACATTTCTACAAATTCAGA 289145
|| || || | ||| || || || |||| ||||||| |||| || ||||| |||||
Sbjct 8127266 CTTGAACAAATCACGTACCCGAGAAGCACCAACACCAACAAACATCTCAACAAACTCAGA 8127325
Query 289146 AGCGGATACTTGA-ATGAATGTTACATTTGCTTCGCCTGCTACTGCCCTCGCCAGAAGTG 289204
| | || | |||| | |||| ||| ||||| || || | ||| | || | ||||
Sbjct 8127326 ACCTGAGA-TTGAGAAAAATGGAACACCAGCTTCACCAGCAATAGCCTTGGCTAACAGTG 8127384
Query 289205 TCTTACCTGTTCCAGGTGGTCCCTCTAATAGAACTCCCTTTGGTACTTTTGCCCCAGCAG 289264
|||| |||||||| || || || | | |||||||| ||||||| || ||| |||
Sbjct 8127385 TCTTCCCTGTTCCTGGAGGACCAACAAGAAGAACTCCTTTTGGTATACGAGCTCCAACAG 8127444
Query 289265 ACTTATATTTCTCAGGGCTCTTTAAAAATTCTACAATTTCCTCAAGTTCATATTTTGCCT 289324
| | | ||||| |||| | ||| ||||| | ||| | || | || || |
Sbjct 8127445 CAGTGAACCTTTCAGGCTTCTTCAGAAACTCTACCACCTCCATGAAATCCTGCTTGGCTT 8127504
Query 289325 CATCACATCCTGCTACATCAGCAAAAGT 289352
|||| || || |||||| |||| ||
Sbjct 8127505 CATCCACCCCAGCAACATCATCAAATGT 8127532
>seq7
Length=19782170
Score = 131 bits (144), Expect = 5e-25
Identities = 317/469 (68%), Gaps = 17/469 (4%)
Strand=Plus/Minus
Query 288882 GTCTAATATATCGGCTCTGTTTGTTGCTGCCAATACAACAATAGATTCGGTTTGCTT--A 288939
|||||| ||||||| ||| |||||| |||| | |||||||| | || | || |
Sbjct 1419335 GTCTAAGATATCGGGTCTATTTGTTCCTGCAAGTACAACAACCCCAGCAGT--GGTTCCA 1419278
Query 288940 AATCCATCCATACTTGTTAAAATTTGATTAAGTGTTTGTTCCCTTTCATCATTTGAACCT 288999
|| |||||||| || | |||||| | || ||| | |||||||| |||||
Sbjct 1419277 AAACCATCCATCTCCACCAACAATTGATTCAACGTACTTTCACGCTCATCATTCGAACCA 1419218
Query 289000 CTTGAATCACCCGAATCGCTCCtttttttACCAACAGCATCAATTTCGTCAATGAAAATC 289059
|| ||| | | |||| | ||||| |||||||| || ||||| || ||
Sbjct 1419217 ---GAGAGACCTCCACGTCCCCTTGCTCGACCAATTGCATCAATCTCATCAATAAATATT 1419161
Query 289060 ACACACGGAGAATTTTGTCTCGCAATTGC--AAATAATTCTCTTACACGGGATGCTCCAA 289117
| || |||| | || || || || | ||| || | ||| || | ||||| |||||
Sbjct 1419160 ATACTGGGAGCACACTGCCTTGC--TTCCTGAAACAAGTTTCTCACCCTGGATGGTCCAA 1419103
Query 289118 GACCAACATACATTTCTACAAATTCAGAAGCGGATACTTGAATGAATGTT-ACATTTGCT 289176
||||||| ||||||| | || |||||| | |||| | ||| ||| | ||| | |
Sbjct 1419102 CACCAACAAACATTTCCATGAAATCAGAACCAGATA-TAGAAAGAAAGGGGACACCAGAT 1419044
Query 289177 TCGCCTGCTACTGCCCTCGCCAGAAGTGTCTTACCTGTTCCAGGTGGTCCCTCTAATAGA 289236
|| ||||| ||| | || | ||| || || ||||| ||||| || ||| | || ||
Sbjct 1419043 TCTCCTGCAGTTGCTTTTGCTAAAAGGGTTTTTCCTGTGCCAGGAGGACCCACCAAAAGT 1418984
Query 289237 ACTCCCTTTGGTACTTTTGCCCCAGCAGA-CTT-ATATTTCTCAGGGCTCTTTAAAAATT 289294
| || || || | |||||| ||| || ||| |||||||| |||||||| | || |
Sbjct 1418983 GCACCTTTAGGAATTTTTGCACCA--AGTTCTTCATATTTCTTTGGGCTCTTGAGGAAGT 1418926
Query 289295 CTACAATTTCCTCAAGTTCATATTTTGCCTCATCACATCCTGCTACATC 289343
|||| ||| || ||| | ||||||||||||||||| || |||||
Sbjct 1418925 GGACAAACTCCATAATTTCTTGCTTTGCCTCATCACATCCAGCAACATC 1418877
>seq13
Length=17820680
Score = 122 bits (134), Expect = 3e-22
Identities = 313/467 (67%), Gaps = 15/467 (3%)
Strand=Plus/Minus
Query 288883 TCTAATATATCGGCTCTGTTTGTTGCTGCCAATACAACAATAGATTCGGTTTGCTT--AA 288940
||||| ||||||| ||| |||||| |||| | |||||||| | || | || ||
Sbjct 2086882 TCTAAGATATCGGGTCTATTTGTTCCTGCAAGTACAACAACTCCAGCAGT--GGTTCCAA 2086825
Query 288941 ATCCATCCATACTTGTTAAAATTTGATTAAGTGTTTGTTCCCTTTCATCATTTGAACCTC 289000
| |||||||| || | ||||| | ||| ||| | ||||||||| |||
Sbjct 2086824 AACCATCCATCTCCACCAACAACTGATTCAATGTGCTTTCACGCTCATCATTTCCACCA- 2086766
Query 289001 TTGAATCACCCGAATCGCTCCtttttttACCAACAGCATCAATTTCGTCAATGAAAATCA 289060
||| ||| | | |||| | ||||| |||||||| || ||||| || || |
Sbjct 2086765 --GAAAGACCTCCACGTCCCCTTGCTCGACCAATTGCATCAATCTCATCAATAAATATTA 2086708
Query 289061 CACACGGAGAATTTTGTCTCGCAATTGC--AAATAATTCTCTTACACGGGATGCTCCAAG 289118
|| |||| | || || || || | ||| || | ||| || | || | |||||
Sbjct 2086707 TACTGGGAGCACACTGCCTTGC--TTCCTGAAACAAGTTTCTCACCCTAGACGGTCCAAC 2086650
Query 289119 ACCAACATACATTTCTACAAATTCAGAAGCGGATACTTGAATGAA-TGTTACATTTGCTT 289177
||||||| |||||| | ||||||||| | |||| | ||| ||| || ||| | ||
Sbjct 2086649 ACCAACAACCATTTCCATGAATTCAGAACCAGATA-TAGAAAGAAATGGCACACCAGATT 2086591
Query 289178 CGCCTGCTACTGCCCTCGCCAGAAGTGTCTTACCTGTTCCAGGTGGTCCCTCTAATAGAA 289237
| ||||| ||| | || | ||| || || ||||| ||||| || ||| | || |||
Sbjct 2086590 CCCCTGCAGTTGCTTTTGCTAAAAGGGTTTTTCCTGTGCCAGGAGGACCCACCAAAAGAG 2086531
Query 289238 CTCCCTTTGGTACTTTTGCCCCAGCAGACTT-ATATTTCTCAGGGCTCTTTAAAAATTCT 289296
| || ||||| | |||||| || | ||| |||||||| |||||||| | || |
Sbjct 2086530 CACCTTTTGGAATTTTTGCACC-GAGTTCTTCATATTTCTTTGGGCTCTTAAGGAAGTGG 2086472
Query 289297 ACAATTTCCTCAAGTTCATATTTTGCCTCATCACATCCTGCTACATC 289343
|| | ||| || ||| | |||||||||||||| || || |||||
Sbjct 2086471 ACGAACTCCATAATTTCTTGCTTTGCCTCATCACAACCAGCAACATC 2086425
Score = 102 bits (112), Expect = 2e-16
Identities = 219/320 (68%), Gaps = 8/320 (3%)
Strand=Plus/Minus
Query 289028 tACCAACAGCATCAATTTCGTCAATGAAAATCACACACGGAGAATTTTGTCTCGCAATTG 289087
|||||| |||||||| || ||||| | || | || |||| | || || || ||
Sbjct 2093413 TACCAATTGCATCAATCTCATCAATAAGTATTATACTGGGAGCACACTGCCTTGC--TTC 2093356
Query 289088 C--AAATAATTCTCTTACACGGGATGCTCCAAGACCAACATACATTTCTACAAATTCAGA 289145
| ||| || | ||| || || |||| ||||| |||||| ||||||| ||||| |||||
Sbjct 2093355 CTGAAACAAGTTTCTCACCCGAGATGGTCCAACACCAACGAACATTTCCACAAAATCAGA 2093296
Query 289146 AGCGGATACTTGAATGAA-TGTTACATTTGCTTCGCCTGCTACTGCCCTCGCCAGAAGTG 289204
| | || | ||||| ||| || ||| | ||| ||||| ||| | || | ||| |
Sbjct 2093295 ACCAGAAA-TTGAAAGAAATGGCACACCAGATTCCCCTGCAGTTGCTTTAGCTAAAAGGG 2093237
Query 289205 TCTTACCTGTTCCAGGTGGTCCCTCTAATAGAACTCCCTTTGGTACTTTTGCCCCAGCAG 289264
| || || || || || || ||| | | ||| | || || || | |||||| || |
Sbjct 2093236 TTTTTCCAGTGCCTGGAGGACCCACCAGAAGAGCACCTTTAGGAATTTTTGCACC-GAGT 2093178
Query 289265 ACTT-ATATTTCTCAGGGCTCTTTAAAAATTCTACAATTTCCTCAAGTTCATATTTTGCC 289323
||| |||||||| ||| | || | || | |||| ||| || ||| | ||||||
Sbjct 2093177 TCTTCATATTTCTTTGGGTTTTTGAGGAAGTGGACAAACTCCATAATTTCTTGCTTTGCC 2093118
Query 289324 TCATCACATCCTGCTACATC 289343
|||||||| || || |||||
Sbjct 2093117 TCATCACAGCCAGCAACATC 2093098
>seq15
Length=20964703
Score = 120 bits (132), Expect = 9e-22
Identities = 285/421 (68%), Gaps = 16/421 (4%)
Strand=Plus/Minus
Query 288939 AAATCCATCCATACTTGTTAAAATTTGATTAAGTGTTTGTTCCCTTTCATCATTTGAACC 288998
||| |||||||| || || | || |||| ||||||||||| |||||||| |||
Sbjct 20643967 AAACCCATCCATCTCGGTCAATAACTGGTTAATAGTTTGTTCCCTCTCATCATTCCCACC 20643908
Query 288999 TCTTGAATCACCCGAATCGCTCCtttttttACCAACAGCATCAATTTCGTCAATGAAAAT 289058
|| || ||| | | | ||||| | | || |||||||||||||| || || ||||
Sbjct 20643907 TC--CCAT-ACCTG---CACCCCTTTGTCTTCCCACAGCATCAATTTCATCTATAAAAAC 20643854
Query 289059 CACACACGGAGAATTTTGTC-TCGCAATTGCAAATAATTCTCTTACACGGGATGCTCCAA 289117
| || || | ||| | | |||| || |||| || ||||| || | || || ||||
Sbjct 20643853 AATGCAAGGCG-CTTTCGACTTCGCCTTTTCAAACAAATCTCTAACCCTTGAAGCACCAA 20643795
Query 289118 GACCAACATACATTTCTACAAATTCAGAAGCGGATACTTGAATGAA---TGTTACATTTG 289174
||||||| ||| ||| |||||||| ||||| | | || ||| || || |
Sbjct 20643794 CACCAACAAACAATTCCACAAATTCGGAAGCCGCGCATGAAAAGAAAGGAGTCCCA---G 20643738
Query 289175 CTTCGCCTGCTACTGCCCTCGCCAGAAGTGTCTTACCTGTTCCAGGTGGTCCCTCTAATA 289234
|||| || |||||||| || |||| | || || || ||||| |||||||| ||| |
Sbjct 20643737 CTTCACCGGCTACTGCTCTTGCCAATAAGGTTTTCCCGGTTCCCGGTGGTCCAACTAGGA 20643678
Query 289235 GAACTCCCTTT-GGTACTTTTGCCCCAGCAGACTTATATTTCTCAGGGCTCTTTAAAAAT 289293
| || |||||| || | ||| || ||| || | || || |||||| |||| | ||
Sbjct 20643677 G-ACACCCTTTCGGAATTTTGGCGCCAAGAGCTGTGTACTTATCAGGGTTCTTAAGGAAA 20643619
Query 289294 TCTACAATTTCCTCAAGTTCATATTTTGCCTCATCACATCCTGCTACATCAGCAAAAGTA 289353
|| || | ||| | | ||| | || || | ||| || || || ||| |||| |||
Sbjct 20643618 TCAACTACTTCTTGTAATTCTAACTTAGCTTGGTCAGCACCAGCCACGTCACCAAAGGTA 20643559
Query 289354 A 289354
|
Sbjct 20643558 A 20643558
>seq8
Length=25521646
Score = 113 bits (124), Expect = 1e-19
Identities = 313/469 (67%), Gaps = 17/469 (4%)
Strand=Plus/Plus
Query 288882 GTCTAATATATCGGCTCTGTTTGTTGCTGCCAATACAACAATAGATTCGGTTTGCTT--A 288939
|||||| ||||| | ||| |||||| |||| | |||||||| | || | || |
Sbjct 24058275 GTCTAAGATATCAGGTCTATTTGTTCCTGCAAGTACAACAACCCCAGCAGT--GGTTCCA 24058332
Query 288940 AATCCATCCATACTTGTTAAAATTTGATTAAGTGTTTGTTCCCTTTCATCATTTGAACCT 288999
|| |||||||| || | |||||| | || ||| | |||||||||| |||
Sbjct 24058333 AAACCATCCATCTCCACCAACAATTGATTCAAAGTACTTTCACGCTCATCATTTGCACCA 24058392
Query 289000 CTTGAATCACCCGAATCGCTCCtttttttACCAACAGCATCAATTTCGTCAATGAAAATC 289059
|| | || | | |||| | ||||| |||||||| || ||||| || ||
Sbjct 24058393 GAGAAACCTCC---ACGTCCCCTTGCTCGACCAATTGCATCAATCTCATCAATAAATATT 24058449
Query 289060 ACACACGGAGAATTTTGTCTCGCAATTGC--AAATAATTCTCTTACACGGGATGCTCCAA 289117
| || |||| | || || || || | ||| || | ||| || | ||||| |||||
Sbjct 24058450 ATACTGGGAGCACACTGCCTTGC--TTCCTGAAACAAGTTTCTCACCCTGGATGGTCCAA 24058507
Query 289118 GACCAACATACATTTCTACAAATTCAGAAGCGGATACTTGAATGAA-TGTTACATTTGCT 289176
||| ||| ||||||| | || || ||| | || | ||||| ||| || ||| | |
Sbjct 24058508 CACCGACAAACATTTCCATGAAATCTGAACCAGAAA-TTGAAAGAAATGGCACAGCAGAT 24058566
Query 289177 TCGCCTGCTACTGCCCTCGCCAGAAGTGTCTTACCTGTTCCAGGTGGTCCCTCTAATAGA 289236
|| ||||| ||| | || | ||| || || ||||| ||||| || ||| | || |||
Sbjct 24058567 TCCCCTGCAGTTGCTTTTGCTAAAAGGGTTTTTCCTGTGCCAGGAGGACCCACCAAAAGA 24058626
Query 289237 ACTCCCTTTGGTACTTTTGCCCCAGCAGA-CTT-ATATTTCTCAGGGCTCTTTAAAAATT 289294
| || ||||| | || || ||| || ||| |||||||| ||| |||| | || |
Sbjct 24058627 GCACCTTTTGGAATCTTCGCGCCA--AGTTCTTCATATTTCTTTGGGTTCTTGAGGAAGT 24058684
Query 289295 CTACAATTTCCTCAAGTTCATATTTTGCCTCATCACATCCTGCTACATC 289343
|||| ||| || ||| | |||||||||||||| || || |||||
Sbjct 24058685 GGACAAACTCCATAATTTCTTGCTTTGCCTCATCACAGCCAGCGACATC 24058733
>seq1
Length=36457581
Score = 107 bits (118), Expect = 6e-18
Identities = 156/220 (71%), Gaps = 3/220 (1%)
Strand=Plus/Plus
Query 156049 TACCATTCCTCTTGCC---ACCCTGATCTACATACCGAGCAGTCTTATTGAAGACACCTA 156105
|||| ||||||||||| ||||||||| ||||| || ||||| | |||||| |||| |
Sbjct 33689063 TACCTTTCCTCTTGCCTCCACCCTGATCAACATAGCGGGCAGTATCATTGAACACACGCA 33689122
Query 156106 GCATAGGAATAATACCATTGGAAGTGCCATTGGTTCCGCGAATATGCGAACCAGATGAGC 156165
|||| |||| |||||||||||| || ||||| ||||| ||||| | || | | |
Sbjct 33689123 GCATTGGAACAATACCATTGGATGTCCCATTAGTTCCACGAATGTAACTCCCTGTGGCAC 33689182
Query 156166 GAACATTATGAATATGTAGTCCAATACCACCTGACCATTTAGAAATTTGAGCGCATTCCT 156225
||| || |||| | | ||||| || || | |||| ||| ||| || ||||
Sbjct 33689183 GAATGTTGTGAACAGAAACACCAATTCCTCCAGCTGATTTGCTGATTGCAGCACACTCCT 33689242
Query 156226 TTACAGTATTGAAAATACCTTCAATAGAATCATCTTCCAT 156265
| | ||||| | || || || ||| |||||||| |||
Sbjct 33689243 TCAAAGTATCATATATTCCCTCTATACTATCATCTTTCAT 33689282
>seq11
Length=35963958
Score = 95.1 bits (104), Expect = 4e-14
Identities = 83/103 (81%), Gaps = 3/103 (3%)
Strand=Plus/Minus
Query 156049 TACCATTCCTCTTGCC---ACCCTGATCTACATACCGAGCAGTCTTATTGAAGACACCTA 156105
|||| ||||||||||| ||| ||||| ||||| |||||||| | ||| || |||| |
Sbjct 31406841 TACCTTTCCTCTTGCCTCCACCTTGATCAACATAGCGAGCAGTATCATTAAAAACACGCA 31406782
Query 156106 GCATAGGAATAATACCATTGGAAGTGCCATTGGTTCCGCGAAT 156148
|||| |||| |||||||||||| || ||||| ||||| || ||
Sbjct 31406781 GCATTGGAACAATACCATTGGATGTCCCATTAGTTCCCCGGAT 31406739
>seq5
Length=26376911
Score = 86.0 bits (94), Expect = 2e-11
Identities = 64/75 (85%), Gaps = 0/75 (0%)
Strand=Plus/Plus
Query 408951 TAACTCAGTTGGTTAGAGTGTCGGTCTTATGAGCCGAAAGTCGTGGGTTCGAGTCCCACA 409010
|| ||||||||||||||| || |||||||||||||||| |||||||||||||| ||| |
Sbjct 2886669 TAGCTCAGTTGGTTAGAGCGTTGGTCTTATGAGCCGAAGGTCGTGGGTTCGAGCCCCGCC 2886728
Query 409011 TAGAACAtttttttA 409025
|| ||| ||||||
Sbjct 2886729 GGGACCATGTTTTTA 2886743
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1471561644940101
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |