Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lupinus_20angustifolius_20[refseq_20GCF_5F001865875.1_202016-11-16] 13,573 sequences; 609,203,021 total letters Query= NC_021312.1 Length=459984 Score E Sequences producing significant alignments: (Bits) Value seq12 147 6e-30 seq7 131 5e-25 seq13 122 3e-22 seq15 120 9e-22 seq8 113 1e-19 seq1 107 6e-18 seq11 95.1 4e-14 seq5 86.0 2e-11 >seq12 Length=19065701 Score = 147 bits (162), Expect = 6e-30 Identities = 344/508 (68%), Gaps = 16/508 (3%) Strand=Plus/Plus Query 288850 CTATCAAACCTACCAGAACGAGTTAATGCTGGGTCTAATATATCGGCTCTGTTTGTTGCT 288909 || ||||||| ||| | | ||| || | ||| | || ||||||||||| |||||| Sbjct 8127036 CTGTCAAACCGACCCGGTCTCAATAAGGCAGAGTCAAGAATGTCGGCTCTGTTAGTTGCT 8127095 Query 288910 GCCAATACAACAATAGATTCG-GTTTG---CTTAAATCCATCCATACTTGTTAAAATTTG 288965 || | ||||||| ||| | || | || ||| |||||||| ||| |||| ||| Sbjct 8127096 GCAA---CAACAAT-GATACCAGTATTACCCTCAAACCCATCCATTTCTGTCAAAAGTTG 8127151 Query 288966 ATTAAGTGTTTGTTCCCTTTCATCATTTGAACCTCTTGAATCACCCGAATCGCTCCtttt 289025 || || || ||||| ||||||||||| |||| ||| ||| || ||| || | Sbjct 8127152 GTTGAGGGTCTGTTCTCTTTCATCATTCCCTCCTCC--AATT--CCGG-TCCCTCTTTGT 8127206 Query 289026 tttACCAACAGCATCAATTTCGTCAATGAAAATCACACACGGAGAATTTTGTCTCGCAAT 289085 || ||||||||||||||||| |||| ||| | | ||| || | ||| | | | || | Sbjct 8127207 CTT-CCAACAGCATCAATTTCATCAACGAACACAATACATGGGGCATTCTCTTTGGCCTT 8127265 Query 289086 TGCAAATAATTCTCTTACACGGGATGCTCCAAGACCAACATACATTTCTACAAATTCAGA 289145 || || || | ||| || || || |||| ||||||| |||| || ||||| ||||| Sbjct 8127266 CTTGAACAAATCACGTACCCGAGAAGCACCAACACCAACAAACATCTCAACAAACTCAGA 8127325 Query 289146 AGCGGATACTTGA-ATGAATGTTACATTTGCTTCGCCTGCTACTGCCCTCGCCAGAAGTG 289204 | | || | |||| | |||| ||| ||||| || || | ||| | || | |||| Sbjct 8127326 ACCTGAGA-TTGAGAAAAATGGAACACCAGCTTCACCAGCAATAGCCTTGGCTAACAGTG 8127384 Query 289205 TCTTACCTGTTCCAGGTGGTCCCTCTAATAGAACTCCCTTTGGTACTTTTGCCCCAGCAG 289264 |||| |||||||| || || || | | |||||||| ||||||| || ||| ||| Sbjct 8127385 TCTTCCCTGTTCCTGGAGGACCAACAAGAAGAACTCCTTTTGGTATACGAGCTCCAACAG 8127444 Query 289265 ACTTATATTTCTCAGGGCTCTTTAAAAATTCTACAATTTCCTCAAGTTCATATTTTGCCT 289324 | | | ||||| |||| | ||| ||||| | ||| | || | || || | Sbjct 8127445 CAGTGAACCTTTCAGGCTTCTTCAGAAACTCTACCACCTCCATGAAATCCTGCTTGGCTT 8127504 Query 289325 CATCACATCCTGCTACATCAGCAAAAGT 289352 |||| || || |||||| |||| || Sbjct 8127505 CATCCACCCCAGCAACATCATCAAATGT 8127532 >seq7 Length=19782170 Score = 131 bits (144), Expect = 5e-25 Identities = 317/469 (68%), Gaps = 17/469 (4%) Strand=Plus/Minus Query 288882 GTCTAATATATCGGCTCTGTTTGTTGCTGCCAATACAACAATAGATTCGGTTTGCTT--A 288939 |||||| ||||||| ||| |||||| |||| | |||||||| | || | || | Sbjct 1419335 GTCTAAGATATCGGGTCTATTTGTTCCTGCAAGTACAACAACCCCAGCAGT--GGTTCCA 1419278 Query 288940 AATCCATCCATACTTGTTAAAATTTGATTAAGTGTTTGTTCCCTTTCATCATTTGAACCT 288999 || |||||||| || | |||||| | || ||| | |||||||| ||||| Sbjct 1419277 AAACCATCCATCTCCACCAACAATTGATTCAACGTACTTTCACGCTCATCATTCGAACCA 1419218 Query 289000 CTTGAATCACCCGAATCGCTCCtttttttACCAACAGCATCAATTTCGTCAATGAAAATC 289059 || ||| | | |||| | ||||| |||||||| || ||||| || || Sbjct 1419217 ---GAGAGACCTCCACGTCCCCTTGCTCGACCAATTGCATCAATCTCATCAATAAATATT 1419161 Query 289060 ACACACGGAGAATTTTGTCTCGCAATTGC--AAATAATTCTCTTACACGGGATGCTCCAA 289117 | || |||| | || || || || | ||| || | ||| || | ||||| ||||| Sbjct 1419160 ATACTGGGAGCACACTGCCTTGC--TTCCTGAAACAAGTTTCTCACCCTGGATGGTCCAA 1419103 Query 289118 GACCAACATACATTTCTACAAATTCAGAAGCGGATACTTGAATGAATGTT-ACATTTGCT 289176 ||||||| ||||||| | || |||||| | |||| | ||| ||| | ||| | | Sbjct 1419102 CACCAACAAACATTTCCATGAAATCAGAACCAGATA-TAGAAAGAAAGGGGACACCAGAT 1419044 Query 289177 TCGCCTGCTACTGCCCTCGCCAGAAGTGTCTTACCTGTTCCAGGTGGTCCCTCTAATAGA 289236 || ||||| ||| | || | ||| || || ||||| ||||| || ||| | || || Sbjct 1419043 TCTCCTGCAGTTGCTTTTGCTAAAAGGGTTTTTCCTGTGCCAGGAGGACCCACCAAAAGT 1418984 Query 289237 ACTCCCTTTGGTACTTTTGCCCCAGCAGA-CTT-ATATTTCTCAGGGCTCTTTAAAAATT 289294 | || || || | |||||| ||| || ||| |||||||| |||||||| | || | Sbjct 1418983 GCACCTTTAGGAATTTTTGCACCA--AGTTCTTCATATTTCTTTGGGCTCTTGAGGAAGT 1418926 Query 289295 CTACAATTTCCTCAAGTTCATATTTTGCCTCATCACATCCTGCTACATC 289343 |||| ||| || ||| | ||||||||||||||||| || ||||| Sbjct 1418925 GGACAAACTCCATAATTTCTTGCTTTGCCTCATCACATCCAGCAACATC 1418877 >seq13 Length=17820680 Score = 122 bits (134), Expect = 3e-22 Identities = 313/467 (67%), Gaps = 15/467 (3%) Strand=Plus/Minus Query 288883 TCTAATATATCGGCTCTGTTTGTTGCTGCCAATACAACAATAGATTCGGTTTGCTT--AA 288940 ||||| ||||||| ||| |||||| |||| | |||||||| | || | || || Sbjct 2086882 TCTAAGATATCGGGTCTATTTGTTCCTGCAAGTACAACAACTCCAGCAGT--GGTTCCAA 2086825 Query 288941 ATCCATCCATACTTGTTAAAATTTGATTAAGTGTTTGTTCCCTTTCATCATTTGAACCTC 289000 | |||||||| || | ||||| | ||| ||| | ||||||||| ||| Sbjct 2086824 AACCATCCATCTCCACCAACAACTGATTCAATGTGCTTTCACGCTCATCATTTCCACCA- 2086766 Query 289001 TTGAATCACCCGAATCGCTCCtttttttACCAACAGCATCAATTTCGTCAATGAAAATCA 289060 ||| ||| | | |||| | ||||| |||||||| || ||||| || || | Sbjct 2086765 --GAAAGACCTCCACGTCCCCTTGCTCGACCAATTGCATCAATCTCATCAATAAATATTA 2086708 Query 289061 CACACGGAGAATTTTGTCTCGCAATTGC--AAATAATTCTCTTACACGGGATGCTCCAAG 289118 || |||| | || || || || | ||| || | ||| || | || | ||||| Sbjct 2086707 TACTGGGAGCACACTGCCTTGC--TTCCTGAAACAAGTTTCTCACCCTAGACGGTCCAAC 2086650 Query 289119 ACCAACATACATTTCTACAAATTCAGAAGCGGATACTTGAATGAA-TGTTACATTTGCTT 289177 ||||||| |||||| | ||||||||| | |||| | ||| ||| || ||| | || Sbjct 2086649 ACCAACAACCATTTCCATGAATTCAGAACCAGATA-TAGAAAGAAATGGCACACCAGATT 2086591 Query 289178 CGCCTGCTACTGCCCTCGCCAGAAGTGTCTTACCTGTTCCAGGTGGTCCCTCTAATAGAA 289237 | ||||| ||| | || | ||| || || ||||| ||||| || ||| | || ||| Sbjct 2086590 CCCCTGCAGTTGCTTTTGCTAAAAGGGTTTTTCCTGTGCCAGGAGGACCCACCAAAAGAG 2086531 Query 289238 CTCCCTTTGGTACTTTTGCCCCAGCAGACTT-ATATTTCTCAGGGCTCTTTAAAAATTCT 289296 | || ||||| | |||||| || | ||| |||||||| |||||||| | || | Sbjct 2086530 CACCTTTTGGAATTTTTGCACC-GAGTTCTTCATATTTCTTTGGGCTCTTAAGGAAGTGG 2086472 Query 289297 ACAATTTCCTCAAGTTCATATTTTGCCTCATCACATCCTGCTACATC 289343 || | ||| || ||| | |||||||||||||| || || ||||| Sbjct 2086471 ACGAACTCCATAATTTCTTGCTTTGCCTCATCACAACCAGCAACATC 2086425 Score = 102 bits (112), Expect = 2e-16 Identities = 219/320 (68%), Gaps = 8/320 (3%) Strand=Plus/Minus Query 289028 tACCAACAGCATCAATTTCGTCAATGAAAATCACACACGGAGAATTTTGTCTCGCAATTG 289087 |||||| |||||||| || ||||| | || | || |||| | || || || || Sbjct 2093413 TACCAATTGCATCAATCTCATCAATAAGTATTATACTGGGAGCACACTGCCTTGC--TTC 2093356 Query 289088 C--AAATAATTCTCTTACACGGGATGCTCCAAGACCAACATACATTTCTACAAATTCAGA 289145 | ||| || | ||| || || |||| ||||| |||||| ||||||| ||||| ||||| Sbjct 2093355 CTGAAACAAGTTTCTCACCCGAGATGGTCCAACACCAACGAACATTTCCACAAAATCAGA 2093296 Query 289146 AGCGGATACTTGAATGAA-TGTTACATTTGCTTCGCCTGCTACTGCCCTCGCCAGAAGTG 289204 | | || | ||||| ||| || ||| | ||| ||||| ||| | || | ||| | Sbjct 2093295 ACCAGAAA-TTGAAAGAAATGGCACACCAGATTCCCCTGCAGTTGCTTTAGCTAAAAGGG 2093237 Query 289205 TCTTACCTGTTCCAGGTGGTCCCTCTAATAGAACTCCCTTTGGTACTTTTGCCCCAGCAG 289264 | || || || || || || ||| | | ||| | || || || | |||||| || | Sbjct 2093236 TTTTTCCAGTGCCTGGAGGACCCACCAGAAGAGCACCTTTAGGAATTTTTGCACC-GAGT 2093178 Query 289265 ACTT-ATATTTCTCAGGGCTCTTTAAAAATTCTACAATTTCCTCAAGTTCATATTTTGCC 289323 ||| |||||||| ||| | || | || | |||| ||| || ||| | |||||| Sbjct 2093177 TCTTCATATTTCTTTGGGTTTTTGAGGAAGTGGACAAACTCCATAATTTCTTGCTTTGCC 2093118 Query 289324 TCATCACATCCTGCTACATC 289343 |||||||| || || ||||| Sbjct 2093117 TCATCACAGCCAGCAACATC 2093098 >seq15 Length=20964703 Score = 120 bits (132), Expect = 9e-22 Identities = 285/421 (68%), Gaps = 16/421 (4%) Strand=Plus/Minus Query 288939 AAATCCATCCATACTTGTTAAAATTTGATTAAGTGTTTGTTCCCTTTCATCATTTGAACC 288998 ||| |||||||| || || | || |||| ||||||||||| |||||||| ||| Sbjct 20643967 AAACCCATCCATCTCGGTCAATAACTGGTTAATAGTTTGTTCCCTCTCATCATTCCCACC 20643908 Query 288999 TCTTGAATCACCCGAATCGCTCCtttttttACCAACAGCATCAATTTCGTCAATGAAAAT 289058 || || ||| | | | ||||| | | || |||||||||||||| || || |||| Sbjct 20643907 TC--CCAT-ACCTG---CACCCCTTTGTCTTCCCACAGCATCAATTTCATCTATAAAAAC 20643854 Query 289059 CACACACGGAGAATTTTGTC-TCGCAATTGCAAATAATTCTCTTACACGGGATGCTCCAA 289117 | || || | ||| | | |||| || |||| || ||||| || | || || |||| Sbjct 20643853 AATGCAAGGCG-CTTTCGACTTCGCCTTTTCAAACAAATCTCTAACCCTTGAAGCACCAA 20643795 Query 289118 GACCAACATACATTTCTACAAATTCAGAAGCGGATACTTGAATGAA---TGTTACATTTG 289174 ||||||| ||| ||| |||||||| ||||| | | || ||| || || | Sbjct 20643794 CACCAACAAACAATTCCACAAATTCGGAAGCCGCGCATGAAAAGAAAGGAGTCCCA---G 20643738 Query 289175 CTTCGCCTGCTACTGCCCTCGCCAGAAGTGTCTTACCTGTTCCAGGTGGTCCCTCTAATA 289234 |||| || |||||||| || |||| | || || || ||||| |||||||| ||| | Sbjct 20643737 CTTCACCGGCTACTGCTCTTGCCAATAAGGTTTTCCCGGTTCCCGGTGGTCCAACTAGGA 20643678 Query 289235 GAACTCCCTTT-GGTACTTTTGCCCCAGCAGACTTATATTTCTCAGGGCTCTTTAAAAAT 289293 | || |||||| || | ||| || ||| || | || || |||||| |||| | || Sbjct 20643677 G-ACACCCTTTCGGAATTTTGGCGCCAAGAGCTGTGTACTTATCAGGGTTCTTAAGGAAA 20643619 Query 289294 TCTACAATTTCCTCAAGTTCATATTTTGCCTCATCACATCCTGCTACATCAGCAAAAGTA 289353 || || | ||| | | ||| | || || | ||| || || || ||| |||| ||| Sbjct 20643618 TCAACTACTTCTTGTAATTCTAACTTAGCTTGGTCAGCACCAGCCACGTCACCAAAGGTA 20643559 Query 289354 A 289354 | Sbjct 20643558 A 20643558 >seq8 Length=25521646 Score = 113 bits (124), Expect = 1e-19 Identities = 313/469 (67%), Gaps = 17/469 (4%) Strand=Plus/Plus Query 288882 GTCTAATATATCGGCTCTGTTTGTTGCTGCCAATACAACAATAGATTCGGTTTGCTT--A 288939 |||||| ||||| | ||| |||||| |||| | |||||||| | || | || | Sbjct 24058275 GTCTAAGATATCAGGTCTATTTGTTCCTGCAAGTACAACAACCCCAGCAGT--GGTTCCA 24058332 Query 288940 AATCCATCCATACTTGTTAAAATTTGATTAAGTGTTTGTTCCCTTTCATCATTTGAACCT 288999 || |||||||| || | |||||| | || ||| | |||||||||| ||| Sbjct 24058333 AAACCATCCATCTCCACCAACAATTGATTCAAAGTACTTTCACGCTCATCATTTGCACCA 24058392 Query 289000 CTTGAATCACCCGAATCGCTCCtttttttACCAACAGCATCAATTTCGTCAATGAAAATC 289059 || | || | | |||| | ||||| |||||||| || ||||| || || Sbjct 24058393 GAGAAACCTCC---ACGTCCCCTTGCTCGACCAATTGCATCAATCTCATCAATAAATATT 24058449 Query 289060 ACACACGGAGAATTTTGTCTCGCAATTGC--AAATAATTCTCTTACACGGGATGCTCCAA 289117 | || |||| | || || || || | ||| || | ||| || | ||||| ||||| Sbjct 24058450 ATACTGGGAGCACACTGCCTTGC--TTCCTGAAACAAGTTTCTCACCCTGGATGGTCCAA 24058507 Query 289118 GACCAACATACATTTCTACAAATTCAGAAGCGGATACTTGAATGAA-TGTTACATTTGCT 289176 ||| ||| ||||||| | || || ||| | || | ||||| ||| || ||| | | Sbjct 24058508 CACCGACAAACATTTCCATGAAATCTGAACCAGAAA-TTGAAAGAAATGGCACAGCAGAT 24058566 Query 289177 TCGCCTGCTACTGCCCTCGCCAGAAGTGTCTTACCTGTTCCAGGTGGTCCCTCTAATAGA 289236 || ||||| ||| | || | ||| || || ||||| ||||| || ||| | || ||| Sbjct 24058567 TCCCCTGCAGTTGCTTTTGCTAAAAGGGTTTTTCCTGTGCCAGGAGGACCCACCAAAAGA 24058626 Query 289237 ACTCCCTTTGGTACTTTTGCCCCAGCAGA-CTT-ATATTTCTCAGGGCTCTTTAAAAATT 289294 | || ||||| | || || ||| || ||| |||||||| ||| |||| | || | Sbjct 24058627 GCACCTTTTGGAATCTTCGCGCCA--AGTTCTTCATATTTCTTTGGGTTCTTGAGGAAGT 24058684 Query 289295 CTACAATTTCCTCAAGTTCATATTTTGCCTCATCACATCCTGCTACATC 289343 |||| ||| || ||| | |||||||||||||| || || ||||| Sbjct 24058685 GGACAAACTCCATAATTTCTTGCTTTGCCTCATCACAGCCAGCGACATC 24058733 >seq1 Length=36457581 Score = 107 bits (118), Expect = 6e-18 Identities = 156/220 (71%), Gaps = 3/220 (1%) Strand=Plus/Plus Query 156049 TACCATTCCTCTTGCC---ACCCTGATCTACATACCGAGCAGTCTTATTGAAGACACCTA 156105 |||| ||||||||||| ||||||||| ||||| || ||||| | |||||| |||| | Sbjct 33689063 TACCTTTCCTCTTGCCTCCACCCTGATCAACATAGCGGGCAGTATCATTGAACACACGCA 33689122 Query 156106 GCATAGGAATAATACCATTGGAAGTGCCATTGGTTCCGCGAATATGCGAACCAGATGAGC 156165 |||| |||| |||||||||||| || ||||| ||||| ||||| | || | | | Sbjct 33689123 GCATTGGAACAATACCATTGGATGTCCCATTAGTTCCACGAATGTAACTCCCTGTGGCAC 33689182 Query 156166 GAACATTATGAATATGTAGTCCAATACCACCTGACCATTTAGAAATTTGAGCGCATTCCT 156225 ||| || |||| | | ||||| || || | |||| ||| ||| || |||| Sbjct 33689183 GAATGTTGTGAACAGAAACACCAATTCCTCCAGCTGATTTGCTGATTGCAGCACACTCCT 33689242 Query 156226 TTACAGTATTGAAAATACCTTCAATAGAATCATCTTCCAT 156265 | | ||||| | || || || ||| |||||||| ||| Sbjct 33689243 TCAAAGTATCATATATTCCCTCTATACTATCATCTTTCAT 33689282 >seq11 Length=35963958 Score = 95.1 bits (104), Expect = 4e-14 Identities = 83/103 (81%), Gaps = 3/103 (3%) Strand=Plus/Minus Query 156049 TACCATTCCTCTTGCC---ACCCTGATCTACATACCGAGCAGTCTTATTGAAGACACCTA 156105 |||| ||||||||||| ||| ||||| ||||| |||||||| | ||| || |||| | Sbjct 31406841 TACCTTTCCTCTTGCCTCCACCTTGATCAACATAGCGAGCAGTATCATTAAAAACACGCA 31406782 Query 156106 GCATAGGAATAATACCATTGGAAGTGCCATTGGTTCCGCGAAT 156148 |||| |||| |||||||||||| || ||||| ||||| || || Sbjct 31406781 GCATTGGAACAATACCATTGGATGTCCCATTAGTTCCCCGGAT 31406739 >seq5 Length=26376911 Score = 86.0 bits (94), Expect = 2e-11 Identities = 64/75 (85%), Gaps = 0/75 (0%) Strand=Plus/Plus Query 408951 TAACTCAGTTGGTTAGAGTGTCGGTCTTATGAGCCGAAAGTCGTGGGTTCGAGTCCCACA 409010 || ||||||||||||||| || |||||||||||||||| |||||||||||||| ||| | Sbjct 2886669 TAGCTCAGTTGGTTAGAGCGTTGGTCTTATGAGCCGAAGGTCGTGGGTTCGAGCCCCGCC 2886728 Query 409011 TAGAACAtttttttA 409025 || ||| |||||| Sbjct 2886729 GGGACCATGTTTTTA 2886743 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1471561644940101