Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Lupinus_20angustifolius_20[refseq_20GCF_5F001865875.1_202016-11-16]
13,573 sequences; 609,203,021 total letters
Query= NC_021858.1
Length=1908524
Score E
Sequences producing significant alignments: (Bits) Value
seq2 192 7e-43
seq11 161 1e-33
seq9 161 1e-33
seq13044 150 2e-30
seq17 87.8 2e-11
>seq2
Length=24697652
Score = 192 bits (212), Expect = 7e-43
Identities = 208/273 (76%), Gaps = 2/273 (1%)
Strand=Plus/Plus
Query 869633 GAGTGGATGTTCTCGATGGCGATCTGGAAGCCGTAAAAGGCCCTCACCTCTGCCACTTGG 869692
|| ||||| |||||||| ||||||||||||||||| || || | | |||| || |||||
Sbjct 21047213 GAATGGATATTCTCGATTGCGATCTGGAAGCCGTAGAATGCACGCGCCTCAGCGACTTGT 21047272
Query 869693 ACCTCCTTCATGAACCGGCCGGCCAGGTTCTCGGCCACGATGCCGTCGCTGGCGGCGAAA 869752
| ||| ||||||||| ||||| ||||| || ||||| |||||| ||||||||
Sbjct 21047273 ATCTCTGTCATGAACCTTCCGGCGAGGTTTTCAAGGACGATTCCGTCGGAAGCGGCGAAG 21047332
Query 869753 AAAGCCAGGACGTGCTTGATAAAGTGGCGCTCGTCGTCGCTGAGCGACACCCAGTGGACG 869812
||||| |||| ||| ||||| |||||||| ||| ||||| |||| || |||||||| ||
Sbjct 21047333 AAAGCGAGGATGTGTTTGATGAAGTGGCGTTCGCCGTCGGTGAGGGAGTCCCAGTGG-CG 21047391
Query 869813 GTG-TCGGCGCTGAGGTCCACCTCCTCGGCGGTCCAGATCGAGGCCTCGGCCTTTTTGTA 869871
| | || ||| || || || ||||||||||||| || || || || ||||||||
Sbjct 21047392 GAGATCTTGAGAGAGATCGACTTCTTCGGCGGTCCAGAATGAAGCTTCTGCTTTTTTGTA 21047451
Query 869872 CATCTCCCATACTTGCTGGTAGCGGATAGGGAA 869904
||| ||||| | || |||| |||| |||||
Sbjct 21047452 CATTTCCCAGATCTGAGGGTATTGGATTGGGAA 21047484
>seq11
Length=35963958
Score = 161 bits (178), Expect = 1e-33
Identities = 210/290 (72%), Gaps = 8/290 (3%)
Strand=Plus/Minus
Query 869633 GAGTGGATGTTCTCGATGGCGATCTGGAAGCCGTAAAAGGCCCTCACCTCTGCCACTTGG 869692
|| ||||| || || || || || ||||| ||||| || || | | |||| || ||||||
Sbjct 2850433 GAATGGATATTTTCAATAGCAATTTGGAATCCGTAGAAAGCACGCGCCTCAGCGACTTGG 2850374
Query 869693 ACCTCCTTCATGAACCGGCCGGCCAGGTTCTCGGCCACGATGCCGTCGCTGGCGGCGAAA 869752
| || |||| |||| ||||| ||||| || ||||| ||||| |||||||||
Sbjct 2850373 ATTTCAGTCATAAACCTTCCGGCAAGGTTTTCAAGAACGATACCGTCAGAGGCGGCGAAG 2850314
Query 869753 AAAGCCAGGACGTGCTTGATAAAGTGGCGCTCGTCGTCGCTGAGCGACACCCAGTGGACG 869812
||||| |||||||| |||| ||||||||| ||| ||||| |||| | |||||||| |
Sbjct 2850313 AAAGCGAGGACGTGTTTGACAAAGTGGCGTTCGCCGTCGGTGAGGTTCTCCCAGTGGCGG 2850254
Query 869813 GTGTCGGCGCTGAGG----TCCACCTCCTCGGCGGTCCAGATCGAGGCCTCGGCCTTTTT 869868
||| ||||| || || |||||||||||||||| || || ||||| || ||
Sbjct 2850253 ACGTC----CTGAGAAAGATCAACTTCCTCGGCGGTCCAGAAAGATGCTTCGGCTTTCTT 2850198
Query 869869 GTACATCTCCCATACTTGCTGGTAGCGGATAGGGAAGAGGACAAAGCGGT 869918
||||||||||| | || |||| | || || || | | ||| ||||
Sbjct 2850197 ATACATCTCCCAGATCTGAGGGTATTGAATTGGAAACATGCAAAAACGGT 2850148
>seq9
Length=21753712
Score = 161 bits (178), Expect = 1e-33
Identities = 201/273 (74%), Gaps = 2/273 (1%)
Strand=Plus/Plus
Query 869633 GAGTGGATGTTCTCGATGGCGATCTGGAAGCCGTAAAAGGCCCTCACCTCTGCCACTTGG 869692
|||||||| || || |||||||| ||||||||||| || || | | |||| || |||||
Sbjct 19304220 GAGTGGATATTTTCAATGGCGATTTGGAAGCCGTAGAAAGCACGCGCCTCAGCGACTTGA 19304279
Query 869693 ACCTCCTTCATGAACCGGCCGGCCAGGTTCTCGGCCACGATGCCGTCGCTGGCGGCGAAA 869752
| | ||||||||| ||||| ||||| || ||||| |||||| |||||||||
Sbjct 19304280 ATTTGAGTCATGAACCTTCCGGCGAGGTTTTCAAGAACGATTCCGTCGGAGGCGGCGAAG 19304339
Query 869753 AAAGCCAGGACGTGCTTGATAAAGTGGCGCTCGTCGTCGCTGAGCGACACCCAGTGGACG 869812
|| || |||| ||| ||||| |||||||| || |||||| |||| || |||| ||| ||
Sbjct 19304340 AAGGCGAGGATGTGTTTGATGAAGTGGCGTTCATCGTCGGTGAGAGAATCCCAATGG-CG 19304398
Query 869813 GTG-TCGGCGCTGAGGTCCACCTCCTCGGCGGTCCAGATCGAGGCCTCGGCCTTTTTGTA 869871
| || || || || || ||||||||||||| || || ||||| || |||||
Sbjct 19304399 AAGATCTTGAGAAAGATCGACTTCTTCGGCGGTCCAGAATGAAGCTTCGGCTTTCTTGTA 19304458
Query 869872 CATCTCCCATACTTGCTGGTAGCGGATAGGGAA 869904
||| ||||| | || |||| |||| || ||
Sbjct 19304459 CATTTCCCAGATCTGAGGGTATTGGATTGGAAA 19304491
>seq13044
Length=2634
Score = 150 bits (166), Expect = 2e-30
Identities = 157/206 (76%), Gaps = 0/206 (0%)
Strand=Plus/Minus
Query 1254343 GCCTGGCCAGTTCGCCGCGCATGATCAGGCGCACGGCGGTCTGGATCTCGCGCGTGCCGA 1254402
|| |||||| ||| ||| ||| || || || || || ||||||||||| || | | ||
Sbjct 1306 GCTTGGCCAATTCACCGGGCAGGAGGAGACGGACAGCAGTCTGGATCTCCCGGGAGGTGA 1247
Query 1254403 TCGTGTTGCGCTTGTTCGAGTGCGCCAGACGGCCGGCCTCGGTGCCGATGCGGTCGATCA 1254462
| ||| ||||||||| ||||||||| |||| |||||| | | |||| | |||| |
Sbjct 1246 TGGTGGAGCGCTTGTTGTAGTGCGCCAAGCGGCTGGCCTCAGCGGCGATCCTCTCGAAGA 1187
Query 1254463 TGTCGTTGACAAACGAGTTCATGACCGACATCGACTTGTTGGAGATGCCCACGTCGGGGT 1254522
||||||| || || |||||||||| ||||| | |||| |||||| || ||||||||
Sbjct 1186 TGTCGTTCACGAAGGAGTTCATGATGGACATGGCCTTGGAGGAGATACCGGTGTCGGGGT 1127
Query 1254523 GCACCTGCTTGAGCACCTTGTAGATG 1254548
|||| ||||| || || |||||||||
Sbjct 1126 GCACTTGCTTAAGTACTTTGTAGATG 1101
>seq17
Length=21299880
Score = 87.8 bits (96), Expect = 2e-11
Identities = 86/111 (77%), Gaps = 0/111 (0%)
Strand=Plus/Minus
Query 1592186 GCCGCCAACTACCTCGACATCAAGCCTCTGCTCGATCTTGGGTGCAAGTCTGTGGCCAAC 1592245
|| || |||||| | ||||||| |||||| || ||| ||| || |||| || ||
Sbjct 1174052 GCTGCTAACTACTTGAACATCAAAAGTCTGCTGGACCTTACATGCCAGACTGTAGCAGAC 1173993
Query 1592246 ATGATCAAGGGCAAGTCGCCCGAGGAGATCCGCAAGACCTTTAACATCAAG 1592296
||||||||||| ||| | || ||||| || ||||||||||| |||||||||
Sbjct 1173992 ATGATCAAGGGTAAGACTCCTGAGGAAATTCGCAAGACCTTCAACATCAAG 1173942
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 6106025336057641
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |