Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Lupinus_20angustifolius_20[refseq_20GCF_5F001865875.1_202016-11-16]
13,573 sequences; 609,203,021 total letters
Query= NC_022098.1
Length=2473870
Score E
Sequences producing significant alignments: (Bits) Value
seq13044 187 4e-41
seq2 152 8e-31
seq11 125 1e-22
>seq13044
Length=2634
Score = 187 bits (206), Expect = 4e-41
Identities = 186/241 (77%), Gaps = 0/241 (0%)
Strand=Plus/Minus
Query 1485470 TGTACTTGGTGACGGCCTTGGTACCCTCTGAGACGGCGTGCCTGGCCAGTTCGCCGCGCA 1485529
|||||||||| || |||||||| || || || ||||||||| |||||| ||| ||| |||
Sbjct 1345 TGTACTTGGTCACAGCCTTGGTGCCTTCAGACACGGCGTGCTTGGCCAATTCACCGGGCA 1286
Query 1485530 TGATCAGGCGCACGGCGGTCTGGATCTCGCGGGTGCCGATCGTGTTGCGCTTGTTAGTGC 1485589
|| || || || || ||||||||||| |||| | ||| ||| ||||||||| |
Sbjct 1285 GGAGGAGACGGACAGCAGTCTGGATCTCCCGGGAGGTGATGGTGGAGCGCTTGTTGTAGT 1226
Query 1485590 GCGCCAGGCGGCCGGCCTCGGTGCCGATGCGGTCGATCATGTCGTTGACAAACGAGTTCA 1485649
|||||| ||||| |||||| | | |||| | |||| |||||||| || || |||||||
Sbjct 1225 GCGCCAAGCGGCTGGCCTCAGCGGCGATCCTCTCGAAGATGTCGTTCACGAAGGAGTTCA 1166
Query 1485650 TGATCGACATCGATTTGTTGGAGATGCCCACGTCGGGGTGCACCTGCTTGAGCACCTTGT 1485709
|||| ||||| | ||| |||||| || |||||||||||| ||||| || || ||||
Sbjct 1165 TGATGGACATGGCCTTGGAGGAGATACCGGTGTCGGGGTGCACTTGCTTAAGTACTTTGT 1106
Query 1485710 A 1485710
|
Sbjct 1105 A 1105
>seq2
Length=24697652
Score = 152 bits (168), Expect = 8e-31
Identities = 187/250 (75%), Gaps = 4/250 (2%)
Strand=Plus/Plus
Query 796150 GCCTCGGGTACTTGGACCTCCTTCATGAAGCGGCCGGCCAGGTTCTCAGCCACGATGCCG 796209
||||| | ||||| | ||| ||||||| | ||||| ||||| ||| ||||| |||
Sbjct 21047258 GCCTCAGCGACTTGTATCTCTGTCATGAACCTTCCGGCGAGGTTTTCAAGGACGATTCCG 21047317
Query 796210 TCGCTGGCGGCGAAAAAGGCGAGGACGTGCTTGATAAAGTGACGCTCGTCGTCGCTGAGC 796269
||| |||||||| || ||||||| ||| ||||| ||||| || ||| ||||| ||||
Sbjct 21047318 TCGGAAGCGGCGAAGAAAGCGAGGATGTGTTTGATGAAGTGGCGTTCGCCGTCGGTGAGG 21047377
Query 796270 GAGACCCAGTGGACCGTG-TCGGCGCCGAGGTCGACCTCCTCGGCGGTCCAAAAGGAGGC 796328
||| |||||||| | | | || ||| ||||| || ||||||||||| || || ||
Sbjct 21047378 GAGTCCCAGTGG-CGGAGATCTTGAGAGAGATCGACTTCTTCGGCGGTCCAGAATGAAGC 21047436
Query 796329 CTCGGCCTTTTTGTACATCTCCCATATCCGTTGGTAGCGGATGGGGAACA-GAACAAAGC 796387
|| || ||||||||||| ||||| ||| | |||| |||| ||||||| | | ||| |
Sbjct 21047437 TTCTGCTTTTTTGTACATTTCCCAGATCTGAGGGTATTGGATTGGGAACATGCAGAAA-C 21047495
Query 796388 GATTGGGGTT 796397
||| |||||
Sbjct 21047496 GATCAGGGTT 21047505
>seq11
Length=35963958
Score = 125 bits (138), Expect = 1e-22
Identities = 170/233 (73%), Gaps = 8/233 (3%)
Strand=Plus/Minus
Query 796150 GCCTCGGGTACTTGGACCTCCTTCATGAAGCGGCCGGCCAGGTTCTCAGCCACGATGCCG 796209
||||| | ||||||| || |||| || | ||||| ||||| ||| ||||| |||
Sbjct 2850388 GCCTCAGCGACTTGGATTTCAGTCATAAACCTTCCGGCAAGGTTTTCAAGAACGATACCG 2850329
Query 796210 TCGCTGGCGGCGAAAAAGGCGAGGACGTGCTTGATAAAGTGACGCTCGTCGTCGCTGAGC 796269
|| ||||||||| || ||||||||||| |||| |||||| || ||| ||||| ||||
Sbjct 2850328 TCAGAGGCGGCGAAGAAAGCGAGGACGTGTTTGACAAAGTGGCGTTCGCCGTCGGTGAGG 2850269
Query 796270 GAGACCCAGTGGACCGTGTCGGCGCCG----AGGTCGACCTCCTCGGCGGTCCAAAAGGA 796325
|||||||| || | || | | | || || || |||||||||||||| || ||
Sbjct 2850268 TTCTCCCAGTGG--CG-GACGTC-CTGAGAAAGATCAACTTCCTCGGCGGTCCAGAAAGA 2850213
Query 796326 GGCCTCGGCCTTTTTGTACATCTCCCATATCCGTTGGTAGCGGATGGGGAACA 796378
|| ||||| || || ||||||||||| ||| | |||| | || || ||||
Sbjct 2850212 TGCTTCGGCTTTCTTATACATCTCCCAGATCTGAGGGTATTGAATTGGAAACA 2850160
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 7914802578083547
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |