Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Lupinus_20angustifolius_20[refseq_20GCF_5F001865875.1_202016-11-16]
13,573 sequences; 609,203,021 total letters
Query= NC_023177.1
Length=124688
Score E
Sequences producing significant alignments: (Bits) Value
seq4 93.3 3e-14
seq19 82.4 6e-11
>seq4
Length=27333975
Score = 93.3 bits (102), Expect = 3e-14
Identities = 150/216 (69%), Gaps = 0/216 (0%)
Strand=Plus/Plus
Query 107555 AATGCAAATTTTTGTCAAAACTTTAACAGGCAAAACCATTACCGTCGAAACGGAGGCTGG 107614
||||||||| || || ||||| | || ||||||||||| ||| | ||| |||| |
Sbjct 24477389 AATGCAAATCTTCGTAAAAACCCTCACCGGCAAAACCATAACCCTAGAAGTGGAGAGTTC 24477448
Query 107615 CGATACTGTCGGCCAGGTAAAACAAAAGATTGCCGATAAAGAAGGCGTGCCCGTGGATCA 107674
||| || ||| | | ||||| |||||| ||||| ||||| | || |||||
Sbjct 24477449 CGACACCATCGACAACGTAAAGGCGAAGATTCAAGATAAGGAAGGAATTCCACCAGATCA 24477508
Query 107675 GCAGAGACTTATTTATGCGGGTAAACAGCTGGAGGACGCCAAAACAATGGCGGACTACAA 107734
||||||| | |||| || || ||||| || || || | | ||| | || || || ||
Sbjct 24477509 GCAGAGATTGATTTTCGCTGGAAAACAACTTGAAGATGGAAGAACCCTAGCTGATTATAA 24477568
Query 107735 CATTCAAAAGGAGTCTACGTTGCACATGGTGTTGAG 107770
|| || ||||| || || | ||| | ||||||||
Sbjct 24477569 TATCCAGAAGGAATCAACACTTCACCTTGTGTTGAG 24477604
>seq19
Length=18159812
Score = 82.4 bits (90), Expect = 6e-11
Identities = 146/213 (69%), Gaps = 0/213 (0%)
Strand=Plus/Plus
Query 107556 ATGCAAATTTTTGTCAAAACTTTAACAGGCAAAACCATTACCGTCGAAACGGAGGCTGGC 107615
|||||||| ||||| || || || || || || ||||| ||| | || |||| | |
Sbjct 4940890 ATGCAAATCTTTGTTAAGACCTTGACCGGAAAGACCATCACCCTTGAGGTGGAGAGTTCC 4940949
Query 107616 GATACTGTCGGCCAGGTAAAACAAAAGATTGCCGATAAAGAAGGCGTGCCCGTGGATCAG 107675
|| || | | | | || ||| |||||| || || || || | || ||||||
Sbjct 4940950 GACACCATTGACAATGTCAAAGCAAAGATCCAAGACAAGGAGGGTATCCCACCCGATCAG 4941009
Query 107676 CAGAGACTTATTTATGCGGGTAAACAGCTGGAGGACGCCAAAACAATGGCGGACTACAAC 107735
||||| ||||| | ||| || || ||||| ||||||| ||| |||| || || |||
Sbjct 4941010 CAGAGGCTTATCTTTGCTGGCAAGCAGCTTGAGGACGGTCGAACTTTGGCCGATTATAAC 4941069
Query 107736 ATTCAAAAGGAGTCTACGTTGCACATGGTGTTG 107768
|| || |||||||| || | ||| | || |||
Sbjct 4941070 ATCCAGAAGGAGTCCACTCTTCACCTTGTCTTG 4941102
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 398810817425797
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |