Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Lupinus_20angustifolius_20[refseq_20GCF_5F001865875.1_202016-11-16]
13,573 sequences; 609,203,021 total letters
Query= NC_023426.1
Length=245717
Score E
Sequences producing significant alignments: (Bits) Value
seq4 107 3e-18
>seq4
Length=27333975
Score = 107 bits (118), Expect = 3e-18
Identities = 142/197 (72%), Gaps = 0/197 (0%)
Strand=Plus/Plus
Query 146032 TGCAAATATTCATAAAAACATTAACAGGAAAAACAATTACTATTGATGTAGAACATAACG 146091
|||| || || | || || || || || ||||| |||||| | || || ||| | |
Sbjct 24477619 TGCAGATTTTTGTGAAGACTTTGACTGGGAAAACCATTACTTTGGAGGTGGAAAGTTCTG 24477678
Query 146092 ATACTATTCAAAATGTAAAAAATAAAATACAACTTAAAGAAGGCATTCCACCCGATCAAC 146151
|||| ||| | ||||| ||| ||| || || ||| ||||| |||||||| ||||| |
Sbjct 24477679 ATACAATTGATAATGTGAAAGCTAAGATTCAGGATAAGGAAGGTATTCCACCGGATCAGC 24477738
Query 146152 AAAGACTCATTTTTGCAGGTAAACAATTAGATGATAATAGAACGTTAACAGATTATAATA 146211
| || | ||||||||||| || |||||||| ||| || || || | ||||||||||
Sbjct 24477739 AGAGGTTGATTTTTGCAGGGAAGCAATTAGAAGATGGAAGGACTTTGGCTGATTATAATA 24477798
Query 146212 TACAAAAAGAATCGACT 146228
| || || || || |||
Sbjct 24477799 TTCAGAAGGAGTCTACT 24477815
Score = 96.9 bits (106), Expect = 5e-15
Identities = 139/196 (71%), Gaps = 0/196 (0%)
Strand=Plus/Plus
Query 146032 TGCAAATATTCATAAAAACATTAACAGGAAAAACAATTACTATTGATGTAGAACATAACG 146091
||||||| ||| ||||||| | || || ||||| || || | || || || | ||
Sbjct 24477391 TGCAAATCTTCGTAAAAACCCTCACCGGCAAAACCATAACCCTAGAAGTGGAGAGTTCCG 24477450
Query 146092 ATACTATTCAAAATGTAAAAAATAAAATACAACTTAAAGAAGGCATTCCACCCGATCAAC 146151
| || || | || ||||| || || ||| ||| ||||| |||||||| ||||| |
Sbjct 24477451 ACACCATCGACAACGTAAAGGCGAAGATTCAAGATAAGGAAGGAATTCCACCAGATCAGC 24477510
Query 146152 AAAGACTCATTTTTGCAGGTAAACAATTAGATGATAATAGAACGTTAACAGATTATAATA 146211
| ||| | ||||| || || |||||| | || ||| ||||| || | ||||||||||
Sbjct 24477511 AGAGATTGATTTTCGCTGGAAAACAACTTGAAGATGGAAGAACCCTAGCTGATTATAATA 24477570
Query 146212 TACAAAAAGAATCGAC 146227
| || || ||||| ||
Sbjct 24477571 TCCAGAAGGAATCAAC 24477586
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 786033017043160
| Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |