Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Lupinus_20angustifolius_20[refseq_20GCF_5F001865875.1_202016-11-16]
13,573 sequences; 609,203,021 total letters
Query= NC_023549.1
Length=56789
Score E
Sequences producing significant alignments: (Bits) Value
seq560 91.5 5e-14
seq5 87.8 7e-13
seq1 87.8 7e-13
>seq560
Length=22672
Score = 91.5 bits (100), Expect = 5e-14
Identities = 64/73 (88%), Gaps = 0/73 (0%)
Strand=Plus/Minus
Query 50111 TTGCGGAGGCGGGATTTGAACCCGCGGCCTCCAGGATATGAGCCTGGCGAGCTACCGAAC 50170
|||||||| ||||||||||||| | | |||| ||| ||||||||| |||||||||| |||
Sbjct 22394 TTGCGGAGACGGGATTTGAACCTGTGACCTCAAGGTTATGAGCCTTGCGAGCTACCAAAC 22335
Query 50171 TGCTCTACTCCGC 50183
|||||||| ||||
Sbjct 22334 TGCTCTACCCCGC 22322
>seq5
Length=26376911
Score = 87.8 bits (96), Expect = 7e-13
Identities = 63/73 (86%), Gaps = 0/73 (0%)
Strand=Plus/Plus
Query 50111 TTGCGGAGGCGGGATTTGAACCCGCGGCCTCCAGGATATGAGCCTGGCGAGCTACCGAAC 50170
|||||||| || |||||||||| | | |||| ||| ||||||||| | ||||||||||||
Sbjct 25868707 TTGCGGAGACGAGATTTGAACCTGTGACCTCAAGGTTATGAGCCTTGTGAGCTACCGAAC 25868766
Query 50171 TGCTCTACTCCGC 50183
|||||||| ||||
Sbjct 25868767 TGCTCTACCCCGC 25868779
>seq1
Length=36457581
Score = 87.8 bits (96), Expect = 7e-13
Identities = 63/73 (86%), Gaps = 0/73 (0%)
Strand=Plus/Minus
Query 50111 TTGCGGAGGCGGGATTTGAACCCGCGGCCTCCAGGATATGAGCCTGGCGAGCTACCGAAC 50170
|||||||| ||||||||||||| | | |||| ||| ||||||||| |||||||||| |||
Sbjct 30655037 TTGCGGAGACGGGATTTGAACCTGTGACCTCAAGGTTATGAGCCTTGCGAGCTACCAAAC 30654978
Query 50171 TGCTCTACTCCGC 50183
||||||| ||||
Sbjct 30654977 TGCTCTAACCCGC 30654965
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 181573929309726
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |