Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lupinus_20angustifolius_20[refseq_20GCF_5F001865875.1_202016-11-16] 13,573 sequences; 609,203,021 total letters Query= NC_025456.1 Length=46547 Score E Sequences producing significant alignments: (Bits) Value seq664 556 4e-154 seq19 212 2e-50 seq1 143 8e-30 seq5 116 1e-21 seq17 113 1e-20 seq9 111 5e-20 seq3 96.9 1e-15 seq11 91.5 4e-14 seq8 91.5 4e-14 >seq664 Length=18451 Score = 556 bits (616), Expect = 4e-154 Identities = 706/961 (73%), Gaps = 10/961 (1%) Strand=Plus/Minus Query 19532 AACCGTCTTTATGTTGGGTGGTTTGGAACACTGATGATTCCGTGTCTCCTTGCAGCCACC 19591 ||||||||||| | || |||||||| ||||||| || | || ||| || | Sbjct 1479 AACCGTCTTTACATCGGATGGTTTGGTGTTTTGATGATCCC-TACCTTATTGACCGCAAC 1421 Query 19592 ATCTGC-TTCATTATTGCATTCATTGCGGCTCCACCAGTTGACATTGATGGCATCCGCGA 19650 |||| || ||||| || |||||||| || || ||||| || |||||||| || || || Sbjct 1420 TTCTGTATTTATTATCGCTTTCATTGCTGCCCCTCCAGTAGATATTGATGGTATTCGTGA 1361 Query 19651 ACCCGTATCCGGTAGCCTTCTTTATGGAAACAACATCATATCGGGAGCCGTCGTTCCGAG 19710 || || || || || ||||| |||||||| || || ||||| || | |||| | Sbjct 1360 GCCTGTTTCTGGATCTCTACTTTACGGAAACAATATTATTTCGGGTGCTATTATTCCTAC 1301 Query 19711 --CAGCAATGCCATCGGACTACACTTCTACCCAATTTGGGAAGCTAGTTCACTTGATGAA 19768 | || || ||||| | ||||| ||||| || |||||||| || |||||||| Sbjct 1300 TTCTGCG--GCTATCGGTTTGCACTTTTACCCGATATGGGAAGCGGCATCCGTTGATGAA 1243 Query 19769 TGGCTCTACAACGGGGGACCGTTCCAACTTGTGGTCTTCCACTTCCTCATTGGCATCTAT 19828 ||| | ||||| || || || | |||| | || | |||||| | |||| | | Sbjct 1242 TGGTTATACAATGGCGGTCCTTATGAACTAATTGTTCTACACTTCTTACTTGGTGTAGCT 1183 Query 19829 GCTTACATGGGACGAGAGTGGGAACTTAGCTATCGACTAGGAATGAGGCCTTGGATTTGT 19888 ||||||||| || |||||||||||||| | ||| || || ||| | ||||||||| Sbjct 1182 TGTTACATGGGTCGTGAGTGGGAACTTAGTTTTCGTCTGGGTATGCGCCCTTGGATTGCG 1123 Query 19889 GTTGCCTACTCTGCTCCGGTTGCAGCCGCCTCTGCGGTCTTTCTCG-TCTACCCGTTTGG 19947 ||||| || || ||||| |||||||| || |||| || ||||| | | || || | || Sbjct 1122 GTTGCATATTCAGCTCCTGTTGCAGCTGCTACTGCTGT-TTTCTTGATTTATCCAATCGG 1064 Query 19948 TCAGGGTAGCTTCTCCGATGCTATGCCTTTGGGTATCTCGGGTACGTTCAACTACATGTT 20007 ||| || ||||| || |||| ||||||| | || ||||| ||||| ||||||| ||| | Sbjct 1063 TCAAGGAAGCTTTTCGGATGGTATGCCTCTAGGAATCTCTGGTACTTTCAACTTTATGAT 1004 Query 20008 GGTATTCCAAGCCGAACATAACATTCTCATGCACCCGTTCCACATGCTTGGTGTGGCTGG 20067 ||||| || || || || || ||||| ||||| || || |||||| | || || ||||| Sbjct 1003 TGTATTTCAGGCTGAGCACAATATTCTTATGCATCCATTTCACATGTTAGGCGTAGCTGG 944 Query 20068 TGTATTCGGTGGGTCACTATTCAGTGCGATGCACGGTTCGCTTGTTACGTCCTCGCTTGT 20127 ||||||||| || || ||||||||||| ||||||||||| |||| || | || | ||| Sbjct 943 TGTATTCGGCGGCTCCCTATTCAGTGCTATGCACGGTTC-CTTGGTAACTTCTAGTTTGA 885 Query 20128 GC-GTGAGACTACTGAACAGGAAAGTCAGAACTATGGTTACAAGTTTGGGCAAGAAGAAG 20186 | | || || || ||| | ||| | ||| | ||||||| ||||| ||||| |||| Sbjct 884 TCAGGGAAACCACAGAAAATGAATCTGCTAACGAAGGTTACAGATTTGGTCAAGAGGAAG 825 Query 20187 AGACCTATAACATCGTAGCCGCTCATGGTTACTTTGGACGTTTGATCTTCCAATACGCTT 20246 | |||||||| || ||||| ||||||||||| ||||| || |||||||||||||| ||| Sbjct 824 AAACCTATAATATTGTAGCTGCTCATGGTTATTTTGGCCGATTGATCTTCCAATATGCTA 765 Query 20247 CTTTCAACAATAGCCGTTCTCTACACTTCTTCCTTGCTGCCTGGCCGGTGGTAGGGATTT 20306 |||||| ||| |||||| |||| ||||| || ||||| ||||| || ||||| || | Sbjct 764 GTTTCAATAATTCTCGTTCTTTACATTTCTTTCTAGCTGCTTGGCCTGTAGTAGGTATCT 705 Query 20307 GGTTCGCTGCCTTGGGCGTTTCTACAATGGCGTTTAATCTGAACGGTTTCAACTTTAACC 20366 |||| | || || || | ||| ||||| || ||| | || |||||||| || |||| Sbjct 704 GGTTTACCGCGTTAGGTATCAGTACCATGGCTTTCAATTTAAATGGTTTCAATTTCAACC 645 Query 20367 AGTCCCTTCTCGACAACAATGGTCGTGTCATTGATACTTGGGCTGACATTCTCAATCGTG 20426 | ||| | | || | | |||||||| ||| |||| |||||||| ||| | || || | Sbjct 644 AATCCGTAGTTGATAGTCAAGGTCGTGTAATTAATACCTGGGCTGATATTATTAACCGAG 585 Query 20427 CTAATCTCGGGTTTGAGGTGATGCATGAACGGAATGCTCATAACTTCCCACTTGACCTTG 20486 |||| || || | || || ||||||||||| ||||||||||||||||| || ||||| | Sbjct 584 CTAACCTTGGTATGGAAGTTATGCATGAACGTAATGCTCATAACTTCCCTCTAGACCTAG 525 Query 20487 C 20487 | Sbjct 524 C 524 >seq19 Length=18159812 Score = 212 bits (234), Expect = 2e-50 Identities = 218/285 (76%), Gaps = 0/285 (0%) Strand=Plus/Plus Query 20203 AGCCGCTCATGGTTACTTTGGACGTTTGATCTTCCAATACGCTTCTTTCAACAATAGCCG 20262 ||| ||||||||||| ||||| || |||||||||||||| ||| |||||| ||| || Sbjct 6185434 AGCTGCTCATGGTTATTTTGGCCGATTGATCTTCCAATATGCTAGTTTCAATAATTCTCG 6185493 Query 20263 TTCTCTACACTTCTTCCTTGCTGCCTGGCCGGTGGTAGGGATTTGGTTCGCTGCCTTGGG 20322 |||| |||| ||||| || ||||| ||||| || ||||| || ||||| | || || || Sbjct 6185494 TTCTTTACATTTCTTTCTAGCTGCTTGGCCTGTAGTAGGTATCTGGTTTACCGCGTTAGG 6185553 Query 20323 CGTTTCTACAATGGCGTTTAATCTGAACGGTTTCAACTTTAACCAGTCCCTTCTCGACAA 20382 | ||| ||||| || ||| | || |||||||| || ||||| ||| | | || | Sbjct 6185554 TATCAGTACCATGGCTTTCAATTTAAATGGTTTCAATTTCAACCAATCCGTAGTTGATAG 6185613 Query 20383 CAATGGTCGTGTCATTGATACTTGGGCTGACATTCTCAATCGTGCTAATCTCGGGTTTGA 20442 | |||||||| ||| |||| |||||||| ||| | || || ||||| || || | || Sbjct 6185614 TCAAGGTCGTGTAATTAATACCTGGGCTGATATTATTAACCGAGCTAACCTTGGTATGGA 6185673 Query 20443 GGTGATGCATGAACGGAATGCTCATAACTTCCCACTTGACCTTGC 20487 || ||||||||||| ||||||||||||||||| || ||||| || Sbjct 6185674 AGTTATGCATGAACGTAATGCTCATAACTTCCCTCTAGACCTAGC 6185718 >seq1 Length=36457581 Score = 143 bits (158), Expect = 8e-30 Identities = 166/224 (74%), Gaps = 0/224 (0%) Strand=Plus/Plus Query 20261 CGTTCTCTACACTTCTTCCTTGCTGCCTGGCCGGTGGTAGGGATTTGGTTCGCTGCCTTG 20320 |||||| |||| ||||| | ||||| ||||| || ||||| || ||||| | || || Sbjct 19599366 CGTTCTTTACATTTCTTTTTAGCTGCTTGGCCTGTAGTAGGTATCTGGTTTACCGCGTTA 19599425 Query 20321 GGCGTTTCTACAATGGCGTTTAATCTGAACGGTTTCAACTTTAACCAGTCCCTTCTCGAC 20380 || ||| ||||| || ||| | || |||||||| || ||||| ||| | | || Sbjct 19599426 GGTACCAGTACCATGGCTTTCAATTTAAATGGTTTCAATTTCAACCAATCCATAGTTGAT 19599485 Query 20381 AACAATGGTCGTGTCATTGATACTTGGGCTGACATTCTCAATCGTGCTAATCTCGGGTTT 20440 | | |||||||| ||| ||| |||||||| ||| | || || ||||| || || | Sbjct 19599486 AGTCAAGGTCGTGTAATTAATATATGGGCTGATATTATAAACCGAGCTAACCTTGGCATG 19599545 Query 20441 GAGGTGATGCATGAACGGAATGCTCATAACTTCCCACTTGACCT 20484 || || ||||||||||| ||||||||||||||||| || ||||| Sbjct 19599546 GAAGTTATGCATGAACGTAATGCTCATAACTTCCCTCTAGACCT 19599589 >seq5 Length=26376911 Score = 116 bits (128), Expect = 1e-21 Identities = 223/324 (69%), Gaps = 6/324 (2%) Strand=Plus/Minus Query 19532 AACCGTCTTTATGTTGGGTGGTTTGGAACACTGATGATTCCGTGTCTCCTTGCAGCCACC 19591 ||||||||||| | || |||||||| ||||||| || | || ||| || | Sbjct 10577352 AACCGTCTTTACATCGGATGGTTTGGTGTTTTGATGATCCC-TACCTTATTGACCGCAAC 10577294 Query 19592 ATCTGC-TTCATTATTGCATTCATTGCGGCTCCACCAGTTGACATTGATGGCATCCGCGA 19650 |||| || ||||| || |||||||| || | ||||| || |||||||| || || || Sbjct 10577293 TTCTGTATTTATTATCGCTTTCATTGCTGCCCTTCCAGTAGATATTGATGGTATTCGTGA 10577234 Query 19651 ACCCGTATCCGGTAGCCTTCTTTATGGAAACAACATCATATCGGGAGCCGTCGTTCCGAG 19710 || || || || || ||||| |||||||| || || ||||| || | |||| | Sbjct 10577233 GCCTGTTTCTGGATCTCTACTTTACGGAAACAATATTATTTCGGGTGCTATTATTCCTAC 10577174 Query 19711 --CAGCAATGCCATCGGACTACACTTCTACCCAATTTGGGAAGCTAGTTCACTTGATGAA 19768 | || || ||||| | ||||| ||||| || |||||||| || |||||||| Sbjct 10577173 TTCTGCG--GCTATCGGTTTGCACTTTTACCCGATATGGGAAGCGGCATCCGTTGATGAA 10577116 Query 19769 TGGCTCTACAACGGGGGACCGTTCCAACTTGTGGTCTTCCACTTCCTCATTGGCATCTAT 19828 ||| | ||||| || || || | |||| | || | |||||| | |||| | | Sbjct 10577115 TGGTTATACAATGGCGGTCCTTATGAACTAATTGTTCTACACTTCTTACTTGGTGTAGCT 10577056 Query 19829 GCTTACATGGGACGAGAGTGGGAA 19852 ||||||||| || ||||||||| Sbjct 10577055 TGTTACATGGGTCGTGAGTGGGAA 10577032 Score = 100 bits (110), Expect = 8e-17 Identities = 152/215 (71%), Gaps = 1/215 (0%) Strand=Plus/Minus Query 20273 TTCTTCCTTGCTGCCTGGCCGGTGGTAGGGATTTGGTTCGCTGCCTTGGGCGTTTCTACA 20332 || || || ||||| || || | ||||| | ||||| || || || || ||| Sbjct 10060459 TTTTTTCTAGCTGCTTG-CCTATAGTAGGTGTCTGGTTTATCGCATTAGGTATTAGTACT 10060401 Query 20333 ATGGCGTTTAATCTGAACGGTTTCAACTTTAACCAGTCCCTTCTCGACAACAATGGTCGT 20392 ||| | || ||| | || |||||||| || ||||| ||| | | || | | |||||| Sbjct 10060400 ATGACTTTCAATTTAAATGGTTTCAATTTCAACCAATCCATAGTTGATAGTCAAGGTCGT 10060341 Query 20393 GTCATTGATACTTGGGCTGACATTCTCAATCGTGCTAATCTCGGGTTTGAGGTGATGCAT 20452 || ||| |||| ||| || ||| | || || ||||| || || | || || |||||| Sbjct 10060340 GTAATTAATACCTGGACTATTATTATTAACCGAGCTAACCTTGGTATGGAAGTTATGCAT 10060281 Query 20453 GAACGGAATGCTCATAACTTCCCACTTGACCTTGC 20487 |||| ||||||||||||||||| || ||||| || Sbjct 10060280 GAACATAATGCTCATAACTTCCCTCTAGACCTAGC 10060246 >seq17 Length=21299880 Score = 113 bits (124), Expect = 1e-20 Identities = 134/178 (75%), Gaps = 3/178 (2%) Strand=Plus/Minus Query 20081 TCACTATTCAGTGCGATGCACGGTTCGCTTGTTACGTCCTCGCTTGTGC-GTGAGACTAC 20139 || ||||||||||| |||||||||| |||| ||| || | | ||| | | || || || Sbjct 21194285 TCCCTATTCAGTGCTATGCACGGTTT-CTTGGTACTTC-TAGTTTGATCAGGGAAACCAC 21194228 Query 20140 TGAACAGGAAAGTCAGAACTATGGTTACAAGTTTGGGCAAGAAGAAGAGACCTATAACAT 20199 ||| | ||| | ||| | ||||||| ||||| ||||| ||||| | |||||| || Sbjct 21194227 AGAAAATGAATTTGCTAACGAAGGTTACAGATTTGGTCAAGAGGAAGAAATCTATAATAT 21194168 Query 20200 CGTAGCCGCTCATGGTTACTTTGGACGTTTGATCTTCCAATACGCTTCTTTCAACAAT 20257 ||||| ||| ||||||| ||||| | |||||||||||||| | | |||||| ||| Sbjct 21194167 TGTAGCTGCTAATGGTTATTTTGGCTGATTGATCTTCCAATATGATAGTTTCAATAAT 21194110 Score = 93.3 bits (102), Expect = 1e-14 Identities = 89/114 (78%), Gaps = 0/114 (0%) Strand=Plus/Plus Query 19984 CTCGGGTACGTTCAACTACATGTTGGTATTCCAAGCCGAACATAACATTCTCATGCACCC 20043 |||| || | ||||||| ||| | ||||| || || || || || ||||| ||||| || Sbjct 19910953 CTCGAGTGCTTTCAACTTTATGATTGTATTTCAGGCTGAGCACAATATTCTTATGCATCC 19911012 Query 20044 GTTCCACATGCTTGGTGTGGCTGGTGTATTCGGTGGGTCACTATTCAGTGCGAT 20097 || |||||| | || || |||||||||||||| || || ||||||||||| || Sbjct 19911013 ATTTCACATGTTAGGCGTAGCTGGTGTATTCGGCGGCTCCCTATTCAGTGCTAT 19911066 >seq9 Length=21753712 Score = 111 bits (122), Expect = 5e-20 Identities = 176/251 (70%), Gaps = 1/251 (0%) Strand=Plus/Minus Query 20238 AATACGCTTCTTTCAACAATAGCCGTTCTCTACACTTCTTCCTTGCTGCCTGGCCGGTGG 20297 |||| ||| |||||| ||| ||||| |||| ||||| || | || ||||| || | Sbjct 18376639 AATATGCTAGTTTCAATAATTCTTGTTCTTTACATTTCTTTCTAGTTGTTTGGCCTGTAG 18376580 Query 20298 TAGGGATTTGGTTCG-CTGCCTTGGGCGTTTCTACAATGGCGTTTAATCTGAACGGTTTC 20356 |||| || ||||| | || || || | || ||||| || || | || |||||| Sbjct 18376579 TAGGTATCTGGTTTAACCGCATTAGGTATCAGCACCATGGCTTTCAACTTAAATGGTTTC 18376520 Query 20357 AACTTTAACCAGTCCCTTCTCGACAACAATGGTCGTGTCATTGATACTTGGGCTGACATT 20416 || || ||||| | | | || | | |||||||| ||| ||| || ||||| ||| Sbjct 18376519 AATTTCAACCAATATGTAGTTGATAGTCAAGGTCGTGTAATTAATATCTGAGCTGATATT 18376460 Query 20417 CTCAATCGTGCTAATCTCGGGTTTGAGGTGATGCATGAACGGAATGCTCATAACTTCCCA 20476 | || || ||||| || || | || || || |||||||| |||||||||||||||| Sbjct 18376459 ATTAACCGAGCTAACCTTGGTATGGAAGTTATACATGAACGTAATGCTCATAACTTCCAT 18376400 Query 20477 CTTGACCTTGC 20487 || ||||| || Sbjct 18376399 CTAGACCTAGC 18376389 >seq3 Length=30153019 Score = 96.9 bits (106), Expect = 1e-15 Identities = 82/101 (81%), Gaps = 0/101 (0%) Strand=Plus/Minus Query 20387 GGTCGTGTCATTGATACTTGGGCTGACATTCTCAATCGTGCTAATCTCGGGTTTGAGGTG 20446 |||||||| ||| ||||||||||||| ||| | || || ||||| | || | || || Sbjct 15965371 GGTCGTGTAATTAATACTTGGGCTGATATTATTAACCGAGCTAACATTGGTATGGAAGTT 15965312 Query 20447 ATGCATGAACGGAATGCTCATAACTTCCCACTTGACCTTGC 20487 ||||||||||| ||||||||||||||||| || ||||| || Sbjct 15965311 ATGCATGAACGTAATGCTCATAACTTCCCTCTAGACCTCGC 15965271 Score = 89.7 bits (98), Expect = 2e-13 Identities = 157/224 (70%), Gaps = 6/224 (3%) Strand=Plus/Plus Query 19532 AACCGTCTTTATGTTGGGTGGTTTGGAACACTGATGATTCCGTGTCTCCTTGCAGCCACC 19591 ||||||||||| | || |||||||| |||||| ||| | || ||| || | Sbjct 19659753 AACCGTCTTTACATCGGATGGTTTGGTGTTTTGATGA-TCCCTACCTTATTGACCGCAAC 19659811 Query 19592 ATCTG-CTTCATTATTGCATTCATTGCGGCTCCACCAGTTGACATTGATGGCATCCGCGA 19650 |||| || ||||| || |||||||| || || ||||| || |||||||| || || || Sbjct 19659812 TTCTGTATTTATTATCGCTTTCATTGCTGCCCCTCCAGTAGATATTGATGGTATTCGTGA 19659871 Query 19651 ACCCGTATCCGGTAGCCTTCTTTATGGAAACAACATCATATCGGGAGCCGTCGTTCCGA- 19709 || || || || || ||||| |||||||| || || ||||| || | |||| | Sbjct 19659872 GCCTGTTTCTGGATCTCTACTTTACGGAAACAATATTATTTCGGGTGCTATTATTCCTAC 19659931 Query 19710 -GCAGCAATGCCATCGGACTACACTTCTACCCAATTTGGGAAGC 19752 | || || ||||| | ||||| ||||| || |||||||| Sbjct 19659932 TTCTGC--GGCTATCGGTTTGCACTTTTACCCGATATGGGAAGC 19659973 >seq11 Length=35963958 Score = 91.5 bits (100), Expect = 4e-14 Identities = 83/105 (79%), Gaps = 0/105 (0%) Strand=Plus/Minus Query 20162 GGTTACAAGTTTGGGCAAGAAGAAGAGACCTATAACATCGTAGCCGCTCATGGTTACTTT 20221 ||||||| |||| |||| ||||| |||||||| || |||| |||||||||| ||| Sbjct 32634539 GGTTACAGATTTGATTAAGAGGAAGAAACCTATAATATTGTAGTTTCTCATGGTTATTTT 32634480 Query 20222 GGACGTTTGATCTTCCAATACGCTTCTTTCAACAATAGCCGTTCT 20266 || || |||||||||||||| ||| |||||| ||| |||||| Sbjct 32634479 GGCCGATTGATCTTCCAATATGCTAGTTTCAATAATTCTCGTTCT 32634435 >seq8 Length=25521646 Score = 91.5 bits (100), Expect = 4e-14 Identities = 199/294 (68%), Gaps = 3/294 (1%) Strand=Plus/Plus Query 19622 CCACCAGTTGACATTGATGGCATCCGCGAACCCGTATCCGGTAGCCTTCTTTATGGAAAC 19681 || ||||| || |||||||| || || || || | || || || ||||| |||||| Sbjct 14924682 CCTCCAGTAGATATTGATGGTATTCGTGAGCCTTT-TCTGGATCTCTACTTTACGGAAAC 14924740 Query 19682 AACATCATATCGGGAGCCGTCGTTCCGAGCAGCAATGCCATCGGACTACACTTCTACCCA 19741 || || || ||||| || | |||| | || || || ||||| ||| | Sbjct 14924741 AATATTATTTCGGGTGCTATTATTCCTACTTATGCGGCTATAGGTTAGCACTTTTACTCG 14924800 Query 19742 ATTTGGGAAGCTAGTTCAC-TTGATGAATGGCTCTACAACGGGGGACCGTTCCAACTTGT 19800 || ||||||| | | || ||||||||||| | ||||| || || || | |||| | Sbjct 14924801 ATATGGGAAG-TGGCATACGTTGATGAATGGTTATACAATGGCGGTCCTTATTAACTAAT 14924859 Query 19801 GGTCTTCCACTTCCTCATTGGCATCTATGCTTACATGGGACGAGAGTGGGAACTTAGCTA 19860 || | |||||| | |||| | | |||||| || || |||||||||||||| | Sbjct 14924860 TGTTCTACACTTCTTACTTGGTGTAGCTTGTTACATAGGTCGCGAGTGGGAACTTAGTTT 14924919 Query 19861 TCGACTAGGAATGAGGCCTTGGATTTGTGTTGCCTACTCTGCTCCGGTTGCAGC 19914 ||| | || ||| ||||||||| ||||| || || |||| |||||||| Sbjct 14924920 TCGTTTGGGTATGCACCCTTGGATTGCGGTTGCATATTCAGCTCTTGTTGCAGC 14924973 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 148804811867034