Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Lupinus_20angustifolius_20[refseq_20GCF_5F001865875.1_202016-11-16]
13,573 sequences; 609,203,021 total letters
Query= NC_026440.1
Length=2243109
Score E
Sequences producing significant alignments: (Bits) Value
seq2 205 1e-46
seq9 201 2e-45
seq13044 163 4e-34
seq11 163 4e-34
>seq2
Length=24697652
Score = 205 bits (226), Expect = 1e-46
Identities = 365/526 (69%), Gaps = 10/526 (2%)
Strand=Plus/Minus
Query 1455753 TGTTCCCCATCCGCTACCAGCGGATATGGGAAATGTACCAAAAAGGCCGAGGCCTCCTTT 1455812
||||||| |||| |||| | ||| |||||||||||| |||||| | || || || ||
Sbjct 21047486 TGTTCCCAATCCAATACCCTCAGATCTGGGAAATGTACAAAAAAG-CAGAAGCTTCATTC 21047428
Query 1455813 TGGACCGCCGAGGAGGTCGACCTCGGCGCCGA-CACGGTCCACTGGGTGTCGCTGAGCGA 1455871
||||||||||| || ||||| ||| || | | | |||||||| || || | |||
Sbjct 21047427 TGGACCGCCGAAGAAGTCGATCTCTCTCAAGATCTCCG-CCACTGGGACTCCCTCACCGA 21047369
Query 1455872 CGACGAGCGCCATTTCATCAAGCACGTCCTCGCCTTTTTTCGCCGCCAGCGATGGCATCG 1455931
|| ||| ||||| |||||||| ||| ||||||| ||| |||||||| ||| || ||||
Sbjct 21047368 CGGCGAACGCCACTTCATCAAACACATCCTCGC-TTTCTTCGCCGCTTCCGACGGAATCG 21047310
Query 1455932 TGGCCGAGAACCTGGCCGGCCGCTTTATGAAAGAGGTCCAATTGCCAGAGGCACGTTTGT 1455991
| || ||||| ||||| | || |||| |||| | ||| | | ||||| ||| |
Sbjct 21047309 TCCTTGAAAACCTCGCCGGAAGGTTCATGACAGAGATACAAGTCGCTGAGGCGCGTGCAT 21047250
Query 1455992 TTTACGGGTTCCAGATCGCCATCGAAAACATCCACTCTGAAACCTACTCGCTCCTGATCG 1456051
| ||||| ||||||||||| ||||| || ||||| ||||| | || ||||| | |
Sbjct 21047249 TCTACGGCTTCCAGATCGCAATCGAGAATATCCATTCTGAGATGTATAGTCTCCTTCTTG 21047190
Query 1456052 ACACCTACGTCAAGGACCCGGTCGAGAAGGACCACCTCTTTCGCGCCATCGACACGGTGC 1456111
| || || |||| || | | || || | | | || | ||| || || ||| | |
Sbjct 21047189 AAACGTATATCAAAGATTCCGCTGATAAAAATCGATTATTCCACGCAATAGAGACGATAC 21047130
Query 1456112 CGTCGGTGAGGAAAAAGGCCGACTGGGCGATGAAGTGGATCAACAAGGAGGGCCTCGACA 1456171
| | || ||||| || || |||||| | |||||| || || | |
Sbjct 21047129 CTTGCGTTGCTAAAAAAGCTGAGTGGGCGCTTCGTTGGATCGAC-----GGTTCAGAATC 21047075
Query 1456172 CTTTGCCGAGCGGCTCGTCGGCTTTGC-CGCGTCGAGGGCATCTTTTTCTCGGGCAGTTT 1456230
||| || || || ||||| | ||||| | || || || || || ||||| || || ||
Sbjct 21047074 CTTCGCTGAACGTCTCGTTGCGTTTGCTTGTGTTGAAGGTATTTTCTTCTCTGGAAGCTT 21047015
Query 1456231 CTGCGCCATCTTTTGGCTCAAGAAGCGCGGCCTCATGCCCGGTCTT 1456276
||| || || |||||| | ||||| || ||||| ||||| ||||||
Sbjct 21047014 CTGTGCGATATTTTGGTTGAAGAAACGAGGCCTTATGCCTGGTCTT 21046969
>seq9
Length=21753712
Score = 201 bits (222), Expect = 2e-45
Identities = 362/525 (69%), Gaps = 8/525 (2%)
Strand=Plus/Minus
Query 1455753 TGTTCCCCATCCGCTACCAGCGGATATGGGAAATGTACCAAAAAGGCCGAGGCCTCCTTT 1455812
|||| || |||| |||| | ||| |||||||||||| | |||| |||| || || ||
Sbjct 19304493 TGTTTCCAATCCAATACCCTCAGATCTGGGAAATGTACAAGAAAG-CCGAAGCTTCATTC 19304435
Query 1455813 TGGACCGCCGAGGAGGTCGACCTCGGCGCCGACACGGTCCACTGGGTGTCGCTGAGCGAC 1455872
||||||||||| || ||||| || || ||| |||| || || | ||||
Sbjct 19304434 TGGACCGCCGAAGAAGTCGATCTTTCTCAAGATCTTCGCCATTGGGATTCTCTCACCGAC 19304375
Query 1455873 GACGAGCGCCATTTCATCAAGCACGTCCTCGCCTTTTTTCGCCGCCAGCGATGGCATCGT 1455932
|| || ||||| |||||||| ||| |||||||||| || ||||||| ||| || |||||
Sbjct 19304374 GATGAACGCCACTTCATCAAACACATCCTCGCCTTCTT-CGCCGCCTCCGACGGAATCGT 19304316
Query 1455933 GGCCGAGAACCTGGCCGGCCGCTTTATGAAAGAGGTCCAATTGCCAGAGGCACGTTTGTT 1455992
|| ||||| ||||| | || |||| | | ||| | | ||||| ||| ||
Sbjct 19304315 TCTTGAAAACCTCGCCGGAAGGTTCATGACTCAAATTCAAGTCGCTGAGGCGCGTGCTTT 19304256
Query 1455993 TTACGGGTTCCAGATCGCCATCGAAAACATCCACTCTGAAACCTACTCGCTCCTGATCGA 1456052
||||| ||||| |||||||| ||||| ||||||||||| | || ||||| ||||
Sbjct 19304255 CTACGGCTTCCAAATCGCCATTGAAAATATCCACTCTGAGATGTATAGCCTCCTTCTCGA 19304196
Query 1456053 CACCTACGTCAAGGACCCGGTCGAGAAGGACCACCTCTTTCGCGCCATCGACACGGTGCC 1456112
|| || |||| ||| | | || || ||| | || | ||| || || || | ||
Sbjct 19304195 AACATATATCAAAGACTCCGCTGATAAAAACCGATTATTCCACGCGATTGAAACCATTCC 19304136
Query 1456113 GTCGGTGAGGAAAAAGGCCGACTGGGCGATGAAGTGGATCAACAAGGAGGGCCTCGACAC 1456172
| || | || || || || |||||| | |||||| || || | | |
Sbjct 19304135 TTGTGTTACAAAGAAAGCTGAATGGGCGTTACGATGGATCGAC-----GGTTCAGAATCC 19304081
Query 1456173 TTTGCCGAGCGGCTCGTCGGCTTTGC-CGCGTCGAGGGCATCTTTTTCTCGGGCAGTTTC 1456231
|| || || || ||||| | ||||| |||| || || || |||||||| || || |||
Sbjct 19304080 TTCGCAGAACGCCTCGTTGCTTTTGCTTGCGTTGAAGGAATATTTTTCTCTGGAAGCTTC 19304021
Query 1456232 TGCGCCATCTTTTGGCTCAAGAAGCGCGGCCTCATGCCCGGTCTT 1456276
|| || || |||||||| || || ||||| | ||||||||||||
Sbjct 19304020 TGTGCGATATTTTGGCTTAAAAAACGCGGGTTAATGCCCGGTCTT 19303976
>seq13044
Length=2634
Score = 163 bits (180), Expect = 4e-34
Identities = 176/232 (76%), Gaps = 6/232 (3%)
Strand=Plus/Plus
Query 724911 ATCTACAAGGTGCTCAAGCAGGTGCACCCCCGAACCGTTGGGCCATCCTCCAACAAGTCC 724970
|||||||| || || ||||| ||||||||| |||| | ||| ||| |||| ||
Sbjct 1102 ATCTACAAAGTACTTAAGCAAGTGCACCCCGACACCGGT-----ATC-TCCTCCAAGGCC 1155
Query 724971 ATGTCGATCATGAACTCGTTTGTCAACGACATGATCGACCGCATCGGCACCGAGGCCGGT 725030
||||| ||||||||||| || || |||||||| |||| | |||| | | |||||| |
Sbjct 1156 ATGTCCATCATGAACTCCTTCGTGAACGACATCTTCGAGAGGATCGCCGCTGAGGCCAGC 1215
Query 725031 CGCCTGGCGCGCTCCAACAAGCGCAACACGATCGGCACGCGCGAGATCCAGACCGCCGTG 725090
||| |||||| || |||||||||| ||| ||| | | || ||||||||||| || ||
Sbjct 1216 CGCTTGGCGCACTACAACAAGCGCTCCACCATCACCTCCCGGGAGATCCAGACTGCTGTC 1275
Query 725091 CGCCTGATCATGCGCGGCGAACTGGCCAGGCACGCCGTCTCCGAGGGCACCA 725142
|| || || ||| ||| ||| |||||| ||||||||| || || |||||||
Sbjct 1276 CGTCTCCTCCTGCCCGGTGAATTGGCCAAGCACGCCGTGTCTGAAGGCACCA 1327
>seq11
Length=35963958
Score = 163 bits (180), Expect = 4e-34
Identities = 368/544 (68%), Gaps = 22/544 (4%)
Strand=Plus/Plus
Query 1455741 ACCGCTTTGTCCTGTTCCCCATCCGCTACCAGCGGATATGGGAAATGTACCAAAAAGGCC 1455800
|||| ||| | |||| || || | |||| | ||| ||||| ||||| | |||| ||
Sbjct 2850148 ACCGTTTTTGCATGTTTCCAATTCAATACCCTCAGATCTGGGAGATGTATAAGAAAG-CC 2850206
Query 1455801 GAGGCCTCCTTTTGGACCGCCGAGGAGGTCGACCT----CGGCGCCGACACGGTCCACTG 1455856
|| || || || |||||||||||||| || || || | | | || | || ||||||
Sbjct 2850207 GAAGCATCTTTCTGGACCGCCGAGGAAGTTGATCTTTCTCAG-GACGTC-CG--CCACTG 2850262
Query 1455857 GGTGTCGCTGAGCGACGACGAGCGCCATTTCATCAAGCACGTCCTCGCCTTTTTTCGCCG 1455916
|| | || | ||||| ||| ||||| || |||| |||||||||| |||| |||||||
Sbjct 2850263 GGAGAACCTCACCGACGGCGAACGCCACTTTGTCAAACACGTCCTCG-CTTTCTTCGCCG 2850321
Query 1455917 CCAGCGATGGCATCGTGGCCGAGAACCTGGCCGGCCGCTTTATGAAAGAGGTCCAATTGC 1455976
|| || || ||||| || ||||| ||||| | ||||||| || ||||| |
Sbjct 2850322 CCTCTGACGGTATCGTTCTTGAAAACCTTGCCGGAAGGTTTATGACTGAAATCCAAGTCG 2850381
Query 1455977 CAGAGGCACGTTTGTTTTACGGGTTCCAGATCGCCATCGAAAACATCCACTCTGAAACCT 1456036
| ||||| ||| || ||||| ||||| || || || ||||| ||||| ||||| | |
Sbjct 2850382 CTGAGGCGCGTGCTTTCTACGGATTCCAAATTGCTATTGAAAATATCCATTCTGAGATGT 2850441
Query 1456037 ACTCGCTCCTGATCGACACCTACGTCAAGGACCCGGTCGAGAAGGACCACCTCTTTCGCG 1456096
|| ||||| | || || || ||||||| ||| || || ||| | || | ||
Sbjct 2850442 ACAGTCTCCTTCTTGAAACATATATCAAGGATTCGGCTGATAAAAACCGTTTGTTCCACG 2850501
Query 1456097 CCATCGACACGGTGCCGTCGGT---GAGGAAAAAGGCCGACTGGGCGATGAAGTGGATCA 1456153
| | || || | || | || ||||||| || || |||||| | ||||||
Sbjct 2850502 CGGTTGAAACAATCCCTTGTGTTGCGAGGAAA---GCTGAGTGGGCGTTACGTTGGATC- 2850557
Query 1456154 ACAAGGAGGGCCTCGACACTTTGCCGAGCGGCTCGTCGGCTTTGC-CGCGTCGAGGGCAT 1456212
| || | | ||| || ||||| || || | ||||| | || || || ||
Sbjct 2850558 ----GATGGTTCAGAATCCTTCGCTGAGCGCCTTGTTGCGTTTGCTTGTGTTGAAGGAAT 2850613
Query 1456213 CTTTTTCTCGGGCAGTTTCTGCGCCATCTTTTGGCTCAAGAAGCGCGGCCTCATGCCCGG 1456272
|| ||||| || || ||||| || || || ||||| |||||| | || || ||||| ||
Sbjct 2850614 TTTCTTCTCTGGAAGCTTCTGTGCTATATTCTGGCTTAAGAAGAGAGGTCTTATGCCTGG 2850673
Query 1456273 TCTT 1456276
|||
Sbjct 2850674 ACTT 2850677
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 7176502059202826
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |