Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lupinus_20angustifolius_20[refseq_20GCF_5F001865875.1_202016-11-16] 13,573 sequences; 609,203,021 total letters Query= NC_026440.1 Length=2243109 Score E Sequences producing significant alignments: (Bits) Value seq2 205 1e-46 seq9 201 2e-45 seq13044 163 4e-34 seq11 163 4e-34 >seq2 Length=24697652 Score = 205 bits (226), Expect = 1e-46 Identities = 365/526 (69%), Gaps = 10/526 (2%) Strand=Plus/Minus Query 1455753 TGTTCCCCATCCGCTACCAGCGGATATGGGAAATGTACCAAAAAGGCCGAGGCCTCCTTT 1455812 ||||||| |||| |||| | ||| |||||||||||| |||||| | || || || || Sbjct 21047486 TGTTCCCAATCCAATACCCTCAGATCTGGGAAATGTACAAAAAAG-CAGAAGCTTCATTC 21047428 Query 1455813 TGGACCGCCGAGGAGGTCGACCTCGGCGCCGA-CACGGTCCACTGGGTGTCGCTGAGCGA 1455871 ||||||||||| || ||||| ||| || | | | |||||||| || || | ||| Sbjct 21047427 TGGACCGCCGAAGAAGTCGATCTCTCTCAAGATCTCCG-CCACTGGGACTCCCTCACCGA 21047369 Query 1455872 CGACGAGCGCCATTTCATCAAGCACGTCCTCGCCTTTTTTCGCCGCCAGCGATGGCATCG 1455931 || ||| ||||| |||||||| ||| ||||||| ||| |||||||| ||| || |||| Sbjct 21047368 CGGCGAACGCCACTTCATCAAACACATCCTCGC-TTTCTTCGCCGCTTCCGACGGAATCG 21047310 Query 1455932 TGGCCGAGAACCTGGCCGGCCGCTTTATGAAAGAGGTCCAATTGCCAGAGGCACGTTTGT 1455991 | || ||||| ||||| | || |||| |||| | ||| | | ||||| ||| | Sbjct 21047309 TCCTTGAAAACCTCGCCGGAAGGTTCATGACAGAGATACAAGTCGCTGAGGCGCGTGCAT 21047250 Query 1455992 TTTACGGGTTCCAGATCGCCATCGAAAACATCCACTCTGAAACCTACTCGCTCCTGATCG 1456051 | ||||| ||||||||||| ||||| || ||||| ||||| | || ||||| | | Sbjct 21047249 TCTACGGCTTCCAGATCGCAATCGAGAATATCCATTCTGAGATGTATAGTCTCCTTCTTG 21047190 Query 1456052 ACACCTACGTCAAGGACCCGGTCGAGAAGGACCACCTCTTTCGCGCCATCGACACGGTGC 1456111 | || || |||| || | | || || | | | || | ||| || || ||| | | Sbjct 21047189 AAACGTATATCAAAGATTCCGCTGATAAAAATCGATTATTCCACGCAATAGAGACGATAC 21047130 Query 1456112 CGTCGGTGAGGAAAAAGGCCGACTGGGCGATGAAGTGGATCAACAAGGAGGGCCTCGACA 1456171 | | || ||||| || || |||||| | |||||| || || | | Sbjct 21047129 CTTGCGTTGCTAAAAAAGCTGAGTGGGCGCTTCGTTGGATCGAC-----GGTTCAGAATC 21047075 Query 1456172 CTTTGCCGAGCGGCTCGTCGGCTTTGC-CGCGTCGAGGGCATCTTTTTCTCGGGCAGTTT 1456230 ||| || || || ||||| | ||||| | || || || || || ||||| || || || Sbjct 21047074 CTTCGCTGAACGTCTCGTTGCGTTTGCTTGTGTTGAAGGTATTTTCTTCTCTGGAAGCTT 21047015 Query 1456231 CTGCGCCATCTTTTGGCTCAAGAAGCGCGGCCTCATGCCCGGTCTT 1456276 ||| || || |||||| | ||||| || ||||| ||||| |||||| Sbjct 21047014 CTGTGCGATATTTTGGTTGAAGAAACGAGGCCTTATGCCTGGTCTT 21046969 >seq9 Length=21753712 Score = 201 bits (222), Expect = 2e-45 Identities = 362/525 (69%), Gaps = 8/525 (2%) Strand=Plus/Minus Query 1455753 TGTTCCCCATCCGCTACCAGCGGATATGGGAAATGTACCAAAAAGGCCGAGGCCTCCTTT 1455812 |||| || |||| |||| | ||| |||||||||||| | |||| |||| || || || Sbjct 19304493 TGTTTCCAATCCAATACCCTCAGATCTGGGAAATGTACAAGAAAG-CCGAAGCTTCATTC 19304435 Query 1455813 TGGACCGCCGAGGAGGTCGACCTCGGCGCCGACACGGTCCACTGGGTGTCGCTGAGCGAC 1455872 ||||||||||| || ||||| || || ||| |||| || || | |||| Sbjct 19304434 TGGACCGCCGAAGAAGTCGATCTTTCTCAAGATCTTCGCCATTGGGATTCTCTCACCGAC 19304375 Query 1455873 GACGAGCGCCATTTCATCAAGCACGTCCTCGCCTTTTTTCGCCGCCAGCGATGGCATCGT 1455932 || || ||||| |||||||| ||| |||||||||| || ||||||| ||| || ||||| Sbjct 19304374 GATGAACGCCACTTCATCAAACACATCCTCGCCTTCTT-CGCCGCCTCCGACGGAATCGT 19304316 Query 1455933 GGCCGAGAACCTGGCCGGCCGCTTTATGAAAGAGGTCCAATTGCCAGAGGCACGTTTGTT 1455992 || ||||| ||||| | || |||| | | ||| | | ||||| ||| || Sbjct 19304315 TCTTGAAAACCTCGCCGGAAGGTTCATGACTCAAATTCAAGTCGCTGAGGCGCGTGCTTT 19304256 Query 1455993 TTACGGGTTCCAGATCGCCATCGAAAACATCCACTCTGAAACCTACTCGCTCCTGATCGA 1456052 ||||| ||||| |||||||| ||||| ||||||||||| | || ||||| |||| Sbjct 19304255 CTACGGCTTCCAAATCGCCATTGAAAATATCCACTCTGAGATGTATAGCCTCCTTCTCGA 19304196 Query 1456053 CACCTACGTCAAGGACCCGGTCGAGAAGGACCACCTCTTTCGCGCCATCGACACGGTGCC 1456112 || || |||| ||| | | || || ||| | || | ||| || || || | || Sbjct 19304195 AACATATATCAAAGACTCCGCTGATAAAAACCGATTATTCCACGCGATTGAAACCATTCC 19304136 Query 1456113 GTCGGTGAGGAAAAAGGCCGACTGGGCGATGAAGTGGATCAACAAGGAGGGCCTCGACAC 1456172 | || | || || || || |||||| | |||||| || || | | | Sbjct 19304135 TTGTGTTACAAAGAAAGCTGAATGGGCGTTACGATGGATCGAC-----GGTTCAGAATCC 19304081 Query 1456173 TTTGCCGAGCGGCTCGTCGGCTTTGC-CGCGTCGAGGGCATCTTTTTCTCGGGCAGTTTC 1456231 || || || || ||||| | ||||| |||| || || || |||||||| || || ||| Sbjct 19304080 TTCGCAGAACGCCTCGTTGCTTTTGCTTGCGTTGAAGGAATATTTTTCTCTGGAAGCTTC 19304021 Query 1456232 TGCGCCATCTTTTGGCTCAAGAAGCGCGGCCTCATGCCCGGTCTT 1456276 || || || |||||||| || || ||||| | |||||||||||| Sbjct 19304020 TGTGCGATATTTTGGCTTAAAAAACGCGGGTTAATGCCCGGTCTT 19303976 >seq13044 Length=2634 Score = 163 bits (180), Expect = 4e-34 Identities = 176/232 (76%), Gaps = 6/232 (3%) Strand=Plus/Plus Query 724911 ATCTACAAGGTGCTCAAGCAGGTGCACCCCCGAACCGTTGGGCCATCCTCCAACAAGTCC 724970 |||||||| || || ||||| ||||||||| |||| | ||| ||| |||| || Sbjct 1102 ATCTACAAAGTACTTAAGCAAGTGCACCCCGACACCGGT-----ATC-TCCTCCAAGGCC 1155 Query 724971 ATGTCGATCATGAACTCGTTTGTCAACGACATGATCGACCGCATCGGCACCGAGGCCGGT 725030 ||||| ||||||||||| || || |||||||| |||| | |||| | | |||||| | Sbjct 1156 ATGTCCATCATGAACTCCTTCGTGAACGACATCTTCGAGAGGATCGCCGCTGAGGCCAGC 1215 Query 725031 CGCCTGGCGCGCTCCAACAAGCGCAACACGATCGGCACGCGCGAGATCCAGACCGCCGTG 725090 ||| |||||| || |||||||||| ||| ||| | | || ||||||||||| || || Sbjct 1216 CGCTTGGCGCACTACAACAAGCGCTCCACCATCACCTCCCGGGAGATCCAGACTGCTGTC 1275 Query 725091 CGCCTGATCATGCGCGGCGAACTGGCCAGGCACGCCGTCTCCGAGGGCACCA 725142 || || || ||| ||| ||| |||||| ||||||||| || || ||||||| Sbjct 1276 CGTCTCCTCCTGCCCGGTGAATTGGCCAAGCACGCCGTGTCTGAAGGCACCA 1327 >seq11 Length=35963958 Score = 163 bits (180), Expect = 4e-34 Identities = 368/544 (68%), Gaps = 22/544 (4%) Strand=Plus/Plus Query 1455741 ACCGCTTTGTCCTGTTCCCCATCCGCTACCAGCGGATATGGGAAATGTACCAAAAAGGCC 1455800 |||| ||| | |||| || || | |||| | ||| ||||| ||||| | |||| || Sbjct 2850148 ACCGTTTTTGCATGTTTCCAATTCAATACCCTCAGATCTGGGAGATGTATAAGAAAG-CC 2850206 Query 1455801 GAGGCCTCCTTTTGGACCGCCGAGGAGGTCGACCT----CGGCGCCGACACGGTCCACTG 1455856 || || || || |||||||||||||| || || || | | | || | || |||||| Sbjct 2850207 GAAGCATCTTTCTGGACCGCCGAGGAAGTTGATCTTTCTCAG-GACGTC-CG--CCACTG 2850262 Query 1455857 GGTGTCGCTGAGCGACGACGAGCGCCATTTCATCAAGCACGTCCTCGCCTTTTTTCGCCG 1455916 || | || | ||||| ||| ||||| || |||| |||||||||| |||| ||||||| Sbjct 2850263 GGAGAACCTCACCGACGGCGAACGCCACTTTGTCAAACACGTCCTCG-CTTTCTTCGCCG 2850321 Query 1455917 CCAGCGATGGCATCGTGGCCGAGAACCTGGCCGGCCGCTTTATGAAAGAGGTCCAATTGC 1455976 || || || ||||| || ||||| ||||| | ||||||| || ||||| | Sbjct 2850322 CCTCTGACGGTATCGTTCTTGAAAACCTTGCCGGAAGGTTTATGACTGAAATCCAAGTCG 2850381 Query 1455977 CAGAGGCACGTTTGTTTTACGGGTTCCAGATCGCCATCGAAAACATCCACTCTGAAACCT 1456036 | ||||| ||| || ||||| ||||| || || || ||||| ||||| ||||| | | Sbjct 2850382 CTGAGGCGCGTGCTTTCTACGGATTCCAAATTGCTATTGAAAATATCCATTCTGAGATGT 2850441 Query 1456037 ACTCGCTCCTGATCGACACCTACGTCAAGGACCCGGTCGAGAAGGACCACCTCTTTCGCG 1456096 || ||||| | || || || ||||||| ||| || || ||| | || | || Sbjct 2850442 ACAGTCTCCTTCTTGAAACATATATCAAGGATTCGGCTGATAAAAACCGTTTGTTCCACG 2850501 Query 1456097 CCATCGACACGGTGCCGTCGGT---GAGGAAAAAGGCCGACTGGGCGATGAAGTGGATCA 1456153 | | || || | || | || ||||||| || || |||||| | |||||| Sbjct 2850502 CGGTTGAAACAATCCCTTGTGTTGCGAGGAAA---GCTGAGTGGGCGTTACGTTGGATC- 2850557 Query 1456154 ACAAGGAGGGCCTCGACACTTTGCCGAGCGGCTCGTCGGCTTTGC-CGCGTCGAGGGCAT 1456212 | || | | ||| || ||||| || || | ||||| | || || || || Sbjct 2850558 ----GATGGTTCAGAATCCTTCGCTGAGCGCCTTGTTGCGTTTGCTTGTGTTGAAGGAAT 2850613 Query 1456213 CTTTTTCTCGGGCAGTTTCTGCGCCATCTTTTGGCTCAAGAAGCGCGGCCTCATGCCCGG 1456272 || ||||| || || ||||| || || || ||||| |||||| | || || ||||| || Sbjct 2850614 TTTCTTCTCTGGAAGCTTCTGTGCTATATTCTGGCTTAAGAAGAGAGGTCTTATGCCTGG 2850673 Query 1456273 TCTT 1456276 ||| Sbjct 2850674 ACTT 2850677 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 7176502059202826