Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Lupinus_20angustifolius_20[refseq_20GCF_5F001865875.1_202016-11-16]
13,573 sequences; 609,203,021 total letters
Query= NC_027213.1
Length=214699
Score E
Sequences producing significant alignments: (Bits) Value
seq11 194 2e-44
seq2 178 2e-39
seq9 167 3e-36
seq2896 149 9e-31
seq1 107 3e-18
>seq11
Length=35963958
Score = 194 bits (214), Expect = 2e-44
Identities = 409/602 (68%), Gaps = 10/602 (2%)
Strand=Plus/Minus
Query 39614 AAGCAGGCGAAGTCACAATGTAGGCCCTCATCTCTACTAATTAATTCGTTAGAAAATGTG 39673
||||| ||||| |||||||| || || ||||||| || || ||||| || || ||
Sbjct 2850736 AAGCAAGCGAAATCACAATGAAGCCCTTCATCTCGCGATATCAACTCGTTTGAGAAGGTA 2850677
Query 39674 AGTCCAGGCATTAGACCACGCTTTTTGAGCCAAAATATGGCAGCAAAAG-ATCCAGAAAA 39732
||||||||||| ||||| | ||| || ||||| ||||| ||| || ||| |||||| ||
Sbjct 2850676 AGTCCAGGCATAAGACCTCTCTTCTTAAGCCAGAATATAGCA-CAGAAGCTTCCAGAGAA 2850618
Query 39733 GAAGATGCCTTCTACTGCTGCAAATGCAACAAGTCTCTCTCCGTA--ACT-TGTATCATT 39789
||| || ||||| || ||||| |||||||| | ||| || | | | || | |
Sbjct 2850617 GAAAATTCCTTCAACACAAGCAAACGCAACAAGGCGCTCAGCGAAGGATTCTGAACC--- 2850561
Query 39790 ATGTATCCACTTCTGTGCCCAATCAGCTTTCTTCTTTACACAAGGCATTGTTTCTATAGC 39849
|| ||||| ||||| ||||||||| || |||||||| |||||||| | ||
Sbjct 2850560 ATCGATCCAACGTAACGCCCACTCAGCTTTCCTCGCAACACAAGGGATTGTTTCAACCGC 2850501
Query 39850 ATTAAAGAGATAATGTTTTTCATCACTATCTTTAACATATGTATCTATTAACAGACTATA 39909
| || | | | ||| ||| | ||| || | |||||| || | | ||||| ||
Sbjct 2850500 GTGGAACAAACGGTTTTTATCAGCCGAATCCTTGATATATGTTTCAAGAAGGAGACTGTA 2850441
Query 39910 CATTTCTGAATGGATGTTTTCAATCGCCATCTGAAATCCGTAAAAACATCTTGCTTCAGT 39969
||| || |||||||| |||||||| || || || |||||||| ||| | || ||||
Sbjct 2850440 CATCTCAGAATGGATATTTTCAATAGCAATTTGGAATCCGTAGAAAGCACGCGCCTCAGC 2850381
Query 39970 AATTTGTACCTCTGAACAAAATCTTTCCGCCAA-ATTTTCATTCACTATTCCATCACTAG 40028
| ||| | || | || || | ||||| ||| |||||| || || || ||| |
Sbjct 2850380 GACTTGGATTTCAG-TCATAAACCTTCCGGCAAGGTTTTCAAGAACGATACCGTCAGAGG 2850322
Query 40029 CGGCAAAAAATGCCAATACATGTTTAATAAAATATTTTTCATCGGGTGTCAATTTATTCC 40088
|||| || || || | || ||||| | ||| | ||| || || | || | ||
Sbjct 2850321 CGGCGAAGAAAGCGAGGACGTGTTTGACAAAGTGGCGTTCGCCGTCGGTGAGGTTCTCCC 2850262
Query 40089 AGTCATTGATATCTTTTGATATATCTACTTCTTCAGCTGTCCAAAACGACGCCTCTGCCT 40148
||| || || | || | ||| ||||| || || ||||| || || || || || |
Sbjct 2850261 AGTGGCGGACGTCCTGAGAAAGATCAACTTCCTCGGCGGTCCAGAAAGATGCTTCGGCTT 2850202
Query 40149 TTTTGTACATGTTCCATATATCACGATATTGTATTGGAAAAATAACAAATCTATTTGGAT 40208
| || ||||| | ||| || | | | ||||| |||||||| || ||| | | |||||
Sbjct 2850201 TCTTATACATCTCCCAGATCTGAGGGTATTGAATTGGAAACATGCAAAAACGGTCTGGAT 2850142
Query 40209 TT 40210
||
Sbjct 2850141 TT 2850140
Score = 98.7 bits (108), Expect = 1e-15
Identities = 158/227 (70%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 69991 GTTCCCGCATTAAATAATGTAGGAGATGCGTGAGTGAACCATTTTTCAGAAAGCAGATTG 70050
|| || ||||| || | ||||||||||| |||||||||||| | | || | ||||| |
Sbjct 31406441 GTCCCGGCATTGAACAGAGTAGGAGATGCATGAGTGAACCATCTCTGTGACATCAGATGG 31406382
Query 70051 TATGTTTCAATAGCTGATTCTATATCCCACTGATGAATTCCTATCGCGACACGCATCAAC 70110
||||||| | ||| || ||||| | || |||||||| | | || | |||||||
Sbjct 31406381 TATGTTTTGACAGCAGAATCTATGTTATCCTTGTGAATTCCAACAGAAACCCTCATCAAC 31406322
Query 70111 ATATGCTGAGGTCGTTCTACCGTTTTATTATTTATTTTCAACAGGTATGATTTTTCCAGA 70170
|| |||||||||| ||| || || | | ||||| ||||| || | || ||
Sbjct 31406321 ATGTGCTGAGGTCTTTCAACAACTTGTCCTTCAACCTTCAAGAGGTAGGACCTCTCAAGG 31406262
Query 70171 GTTTTAAACCCAAAATAGTTGTATGAAAAGTCTCTTTCGTAAATAAT 70217
||||| || ||||| || | || |||||| || || || || ||
Sbjct 31406261 GTTTTGAAACCAAAGTAATCATAGTCAAAGTCCCTATCATATATGAT 31406215
>seq2
Length=24697652
Score = 178 bits (196), Expect = 2e-39
Identities = 392/582 (67%), Gaps = 8/582 (1%)
Strand=Plus/Plus
Query 39614 AAGCAGGCGAAGTCACAATGTAGGCCCTCATCTCTACTAATTAATTCGTTAGAAAATGTG 39673
||||| ||||| ||||| |||| |||||||||| ||||| ||||| || || ||
Sbjct 21046910 AAGCACGCGAAATCACAGTGTAAACCCTCATCTCGCGAGATTAACTCGTTTGAGAAGGTA 21046969
Query 39674 AGTCCAGGCATTAGACCACGCTTTTTGAGCCAAAATATGGCAGCAAAAGAT-CCAGAAAA 39732
|| |||||||| || || || || || | ||||||||| ||| || ||| | ||||| ||
Sbjct 21046970 AGACCAGGCATAAGGCCTCGTTTCTTCAACCAAAATATCGCA-CAGAAGCTTCCAGAGAA 21047028
Query 39733 GAAGATGCCTTCTACTGCTGCAAATGCAACAAGTCTCTCTCCGTA--ACT-TGTATCATT 39789
||| || ||||| || ||||| ||||| || | || || | | | || | | |
Sbjct 21047029 GAAAATACCTTCAACACAAGCAAACGCAACGAGACGTTCAGCGAAGGATTCTGAACCGTC 21047088
Query 39790 ATGTATCCACTTCTGTGCCCAATCAGCTTTCTTCTTTACACAAGGCATTGTTTCTATAGC 39849
||||| | ||||| |||||||| || || ||||| || || ||||| ||
Sbjct 21047089 G---ATCCAACGAAGCGCCCACTCAGCTTTTTTAGCAACGCAAGGTATCGTCTCTATTGC 21047145
Query 39850 ATTAAAGAGATAATGTTTTTCATCACTATCTTTAACATATGTATCTATTAACAGACTATA 39909
| || | || ||| ||| | |||||| | ||| || || | | ||||||||
Sbjct 21047146 GTGGAATAATCGATTTTTATCAGCGGAATCTTTGATATACGTTTCAAGAAGGAGACTATA 21047205
Query 39910 CATTTCTGAATGGATGTTTTCAATCGCCATCTGAAATCCGTAAAAACATCTTGCTTCAGT 39969
||| || |||||||| || || || || ||||| || ||||| || | || ||||
Sbjct 21047206 CATCTCAGAATGGATATTCTCGATTGCGATCTGGAAGCCGTAGAATGCACGCGCCTCAGC 21047265
Query 39970 AATTTGTACCTCTGAACAAAATCTTTCCGCCAAATTTTCATTCACTATTCCATCACTAGC 40029
| ||||| ||||| || ||| | || | |||||| || ||||| || |||
Sbjct 21047266 GACTTGTATCTCTGTCATGAACCTTCCGGCGAGGTTTTCAAGGACGATTCCGTCGGAAGC 21047325
Query 40030 GGCAAAAAATGCCAATACATGTTTAATAAAATATTTTTCATCGGGTGTCAATTTATTCCA 40089
||| || || || | | ||||| || || | ||| || || | | |||
Sbjct 21047326 GGCGAAGAAAGCGAGGATGTGTTTGATGAAGTGGCGTTCGCCGTCGGTGAGGGAGTCCCA 21047385
Query 40090 GTCATTGATATCTTTTGATATATCTACTTCTTCAGCTGTCCAAAACGACGCCTCTGCCTT 40149
|| || ||||| || | ||| |||||||| || ||||| || || || ||||| ||
Sbjct 21047386 GTGGCGGAGATCTTGAGAGAGATCGACTTCTTCGGCGGTCCAGAATGAAGCTTCTGCTTT 21047445
Query 40150 TTTGTACATGTTCCATATATCACGATATTGTATTGGAAAAAT 40191
||||||||| | ||| || | | | ||||| ||||| || ||
Sbjct 21047446 TTTGTACATTTCCCAGATCTGAGGGTATTGGATTGGGAACAT 21047487
>seq9
Length=21753712
Score = 167 bits (184), Expect = 3e-36
Identities = 401/592 (68%), Gaps = 26/592 (4%)
Strand=Plus/Plus
Query 39613 TAAGCAGGCGAAGTCACAATGTAGGCCCTCATCTCTACTAATTAATTCGTTAGAAAATGT 39672
||| || ||||| |||||||| || || ||||||| || || ||||| || |||||
Sbjct 19303916 TAAACAAGCGAAATCACAATGAAGCCCTTCATCTCGCGATATCAACTCGTTCGAGAATGT 19303975
Query 39673 GAGTCCAGGCATTAGACCACGCTTTTTGAGCCAAAATATGGCAGCAAAAG-ATCCAGAAA 39731
|| || ||||||| || || ||||| ||||||||||| ||| || ||| |||||| |
Sbjct 19303976 AAGACCGGGCATTAACCCGCGTTTTTTAAGCCAAAATATCGCA-CAGAAGCTTCCAGAGA 19304034
Query 39732 AGAAGATGCCTTCTACTGCTGCAAATGCAACAAGTCTCTCTCCGTA--ACT-TGTATCAT 39788
| || || ||||| || ||||| ||||| || | ||| || | | | || | |
Sbjct 19304035 AAAATATTCCTTCAACGCAAGCAAAAGCAACGAGGCGTTCTGCGAAGGATTCTGAACC-- 19304092
Query 39789 TATGTATCCACTTCTGT---GCCCAATCAGCTTTCTTCTTTACACAAGGCATTGTTTCTA 39845
| ||||| || || ||||| ||||||||||| | |||||||| || ||||| |
Sbjct 19304093 -GTCGATCCA--TC-GTAACGCCCATTCAGCTTTCTTTGTAACACAAGGAATGGTTTCAA 19304148
Query 39846 TAGCATTAAAGAGATAAT--GTTTT--TCATCACTATCTTTAACATATGTATCTATTAAC 39901
| || | | ||||| ||||| ||| | ||||| | |||||| || | |
Sbjct 19304149 TCGCGT----GGAATAATCGGTTTTTATCAGCGGAGTCTTTGATATATGTTTCGAGAAGG 19304204
Query 39902 AGACTATACATTTCTGAATGGATGTTTTCAATCGCCATCTGAAATCCGTAAAAACATCTT 39961
|| |||||||| || || ||||| |||||||| || || || || ||||| ||| |
Sbjct 19304205 AGGCTATACATCTCAGAGTGGATATTTTCAATGGCGATTTGGAAGCCGTAGAAAGCACGC 19304264
Query 39962 GCTTCAGTAATTTGTACCTCTGA-ACA-AAATCTTTCCGCCAAATTTTCATTCACTATTC 40019
|| |||| | ||| | | ||| || || ||| | || | |||||| || ||||
Sbjct 19304265 GCCTCAGCGACTTGAA--TTTGAGTCATGAACCTTCCGGCGAGGTTTTCAAGAACGATTC 19304322
Query 40020 CATCACTAGCGGCAAAAAATGCCAATACATGTTTAATAAAATATTTTTCATCGGGTGTCA 40079
| || ||||| || || || | | ||||| || || | ||||||| || |
Sbjct 19304323 CGTCGGAGGCGGCGAAGAAGGCGAGGATGTGTTTGATGAAGTGGCGTTCATCGTCGGTGA 19304382
Query 40080 ATTTATTCCAGTCATTGATATCTTTTGATATATCTACTTCTTCAGCTGTCCAAAACGACG 40139
|| ||| | | ||||| || | ||| |||||||| || ||||| || || |
Sbjct 19304383 GAGAATCCCAATGGCGAAGATCTTGAGAAAGATCGACTTCTTCGGCGGTCCAGAATGAAG 19304442
Query 40140 CCTCTGCCTTTTTGTACATGTTCCATATATCACGATATTGTATTGGAAAAAT 40191
| || || || |||||||| | ||| || | | | ||||| |||||||| ||
Sbjct 19304443 CTTCGGCTTTCTTGTACATTTCCCAGATCTGAGGGTATTGGATTGGAAACAT 19304494
>seq2896
Length=25968
Score = 149 bits (164), Expect = 9e-31
Identities = 172/232 (74%), Gaps = 0/232 (0%)
Strand=Plus/Minus
Query 69750 TCCTCCCTGATCTATGTATCTGGCAGTGTTATTATAGACTCTCAGCATCGGAATAATACC 69809
||| || ||||| | || | ||||| | ||| | || | |||||| |||||||| ||
Sbjct 4779 TCCACCTTGATCAACATAGCGCGCAGTATCATTGAACACACGCAGCATTGGAATAATGCC 4720
Query 69810 ATTAGATTTACCATTTGTTCCAGAAATATAACTTCCTCTTGCGCGAATATTACTAATAGA 69869
||| ||| | |||||||| ||| ||| ||||| ||| | || |||||||| || |||
Sbjct 4719 ATTGGATGTCCCATTTGTCCCACGAATGTAACTGCCTGTGGCACGAATATTGTGAACAGA 4660
Query 69870 TAGACCTATTCCTCCTGCCATTTTAGAGATTAGAGCACAACGTTTCAATGTGTCATATAT 69929
| ||| |||||||| || |||| ||| | |||||| |||||| || ||||||||
Sbjct 4659 GACACCAATTCCTCCAGCTGATTTACTGATGACAGCACACTCTTTCAAAGTTTCATATAT 4600
Query 69930 ACCCTCTATGCTATCATCTATCATGTTAAGAAGAAAACAGCTAGACATTTGA 69981
||||||||| ||||||||| ||||| | ||| || || ||| ||| |||
Sbjct 4599 ACCCTCTATACTATCATCTTTCATGCACACAAGGAAGCAACTACTCATCTGA 4548
Score = 95.1 bits (104), Expect = 2e-14
Identities = 139/197 (71%), Gaps = 0/197 (0%)
Strand=Plus/Minus
Query 68737 ACTCTACGAGTGTAAATATTACTGGTATATGGTTCCACAGATTCATTATTTCCCAGAATT 68796
||||||||| |||| ||||| ||||||||||| | | | |||||||| || |||||
Sbjct 6753 ACTCTACGACTGTAGATATTTGAAGTATATGGTTCAAAACACTCATTATTACCAAGAATC 6694
Query 68797 TGAGCAGTTGATGCAGTTGGCATAGGTGCCACCAATAAACTATTTCTAAGACCATGTGTT 68856
|| ||| |||||||| |||||||| || || | | |||||| | ||||| | ||
Sbjct 6693 TGGCTAGTAGATGCAGTAGGCATAGGGGCAACAAGAAGTGAATTTCTCACACCATTTTTT 6634
Query 68857 ATGATTTTATCTTTTAGATGTTTCCAATCCCAAAGATCAGATGGTACAACATTCCAAAGA 68916
| || | || |||| |||||||||||| ||| || ||| ||| ||| |
Sbjct 6633 AATATCCTCTCCCTTAGTGCATTCCAATCCCAACGATTTGAGGGTGTCACACCCCACATG 6574
Query 68917 TCGTATTGTAGAATTCC 68933
|| ||| ||||||||
Sbjct 6573 TCTGGTTGAAGAATTCC 6557
>seq1
Length=36457581
Score = 107 bits (118), Expect = 3e-18
Identities = 160/227 (70%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 69991 GTTCCCGCATTAAATAATGTAGGAGATGCGTGAGTGAACCATTTTTCAGAAAGCAGATTG 70050
||||| ||||| |||| ||||||||||| |||||||||||| | | ||| | || | |
Sbjct 33689444 GTTCCGGCATTGAATAGAGTAGGAGATGCATGAGTGAACCATCTCTGAGACATTAGGTGG 33689503
Query 70051 TATGTTTCAATAGCTGATTCTATATCCCACTGATGAATTCCTATCGCGACACGCATCAAC 70110
|| |||| | ||| || || || || || |||||||| | | || | |||||||
Sbjct 33689504 TAAGTTTTGACAGCAGAATCAATGTCATCCTTGTGAATTCCAACAGAAACCCTCATCAAC 33689563
Query 70111 ATATGCTGAGGTCGTTCTACCGTTTTATTATTTATTTTCAACAGGTATGATTTTTCCAGA 70170
|| |||||||||| ||| || ||| | | ||||||||||| || | || ||
Sbjct 33689564 ATGTGCTGAGGTCTTTCAACAACTTTTCCTTCAACCTTCAACAGGTAGGACCTCTCAAGG 33689623
Query 70171 GTTTTAAACCCAAAATAGTTGTATGAAAAGTCTCTTTCGTAAATAAT 70217
||||| || ||||| || | || |||||| || || || || ||
Sbjct 33689624 GTTTTGAAACCAAAGTAATCATAGTCAAAGTCCCTATCATATATGAT 33689670
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 686792257335720
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