Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Lupinus_20angustifolius_20[refseq_20GCF_5F001865875.1_202016-11-16]
13,573 sequences; 609,203,021 total letters
Query= NC_027778.1
Length=124244
Score E
Sequences producing significant alignments: (Bits) Value
seq2 178 1e-39
seq11 167 2e-36
seq8 84.2 2e-11
>seq2
Length=24697652
Score = 178 bits (196), Expect = 1e-39
Identities = 397/588 (68%), Gaps = 16/588 (3%)
Strand=Plus/Minus
Query 43707 TGTTTCCAATTCAATATCATGACATATGGCAAATGTACAAAAAAGCACAGGCGTCATTTT 43766
|||| ||||| ||||| | | | || ||| ||||||||||||||||| | || ||||| |
Sbjct 21047486 TGTTCCCAATCCAATACCCTCAGATCTGGGAAATGTACAAAAAAGCAGAAGCTTCATTCT 21047427
Query 43767 GGACAGCAGAAGAAGTTGATTTGACTAAAGA-CTTAGCACATTGGATTGCATTAAA-ACC 43824
|||| || |||||||| ||| | || |||| || || | ||| | | | | ||
Sbjct 21047426 GGACCGCCGAAGAAGTCGATCTCTCTCAAGATCTCCGCCACTGGGACTCCCTCACCGACG 21047367
Query 43825 ACAAGAAAAACATTTTATATCTTTGGTTTTGGCGTTTTTTGCTGCGAGCGACGGGATAGT 43884
| ||| || || || | | || || || || || |||||| || ||
Sbjct 21047366 GC--GAACGCCACTTCATCAAACACATCCTCGCTTTCTTCGCCGCTTCCGACGGAATCGT 21047309
Query 43885 CAATGAAAATTTGGTTAGTCGGTTTGCGCAAGAAGTTCAATTACCAGAAGCACGATGTTT 43944
| |||||| | | | |||| | ||| | ||| | | || || || ||
Sbjct 21047308 CCTTGAAAACCTCGCCGGAAGGTTCATGACAGAGATACAAGTCGCTGAGGCGCGTGCATT 21047249
Query 43945 TTATGGGTTTCAAATTGCCATAGAAAATATTCATTCGGAAATGTACAGTCTTCTGATAGA 44004
|| || || || || || || || ||||| ||||| || ||||| ||||| || | ||
Sbjct 21047248 CTACGGCTTCCAGATCGCAATCGAGAATATCCATTCTGAGATGTATAGTCTCCTTCTTGA 21047189
Query 44005 TACGTACATCAAAGATGGGCACGAGAAGCATCGATTGTTTAATGCGATAGAAACAGTACC 44064
||||| ||||||||| || || ||||||| || | || ||||| || ||||
Sbjct 21047188 AACGTATATCAAAGATTCCGCTGATAAAAATCGATTATTCCACGCAATAGAGACGATACC 21047129
Query 44065 T-GCGAT--TAAACATAAAGCAGACTGGGCCCTTAAATGGATAAA---TTCAAATGATTC 44118
| ||| | |||| ||||| || ||||| ||| ||||| | |||| || ||
Sbjct 21047128 TTGCGTTGCTAAA---AAAGCTGAGTGGGCGCTTCGTTGGATCGACGGTTCA---GAATC 21047075
Query 44119 TTTTGGAGAACGACTTGTCGCGTTTGCAGTTGTGGAAGGCATTTTCTTTTCAGGATCGTT 44178
|| | ||||| || || |||||||| ||| ||||| |||||||| || ||| ||
Sbjct 21047074 CTTCGCTGAACGTCTCGTTGCGTTTGCTTGTGTTGAAGGTATTTTCTTCTCTGGAAGCTT 21047015
Query 44179 TGCGGCCATATTTTGGTTAAAGAAACGAGGTTTGATGCCTGGGTTGACGTTTTCAAATGA 44238
|| ||||||||||| ||||||||||| | |||||||| | || || ||||| ||
Sbjct 21047014 CTGTGCGATATTTTGGTTGAAGAAACGAGGCCTTATGCCTGGTCTTACCTTCTCAAACGA 21046955
Query 44239 GTTAATAAGTCGTGATGAAGGCTTACATTGCGATTTTGCTTGCTTGTT 44286
|||||| || ||||| || ||||| || ||||| || ||||||||
Sbjct 21046954 GTTAATCTCGCGAGATGAGGGTTTACACTGTGATTTCGCGTGCTTGTT 21046907
>seq11
Length=35963958
Score = 167 bits (184), Expect = 2e-36
Identities = 427/642 (67%), Gaps = 25/642 (4%)
Strand=Plus/Plus
Query 43942 TTTTTATGGGTTTCAAATTGCCATAGAAAATATTCATTCGGAAATGTACAGTCTTCTGAT 44001
||| || || || |||||||| || |||||||| ||||| || ||||||||||| || |
Sbjct 2850395 TTTCTACGGATTCCAAATTGCTATTGAAAATATCCATTCTGAGATGTACAGTCTCCTTCT 2850454
Query 44002 AGATACGTACATCAAAGATGGGCACGAGAAGCATCGATTGTTTAATGCGATAGAAACAGT 44061
|| || || ||||| ||| | || || | || ||||| | ||| | |||||| |
Sbjct 2850455 TGAAACATATATCAAGGATTCGGCTGATAAAAACCGTTTGTTCCACGCGGTTGAAACAAT 2850514
Query 44062 ACCTGCGATTAAACATAAAGCAGACTGGGCCCTTAAATGGATAAAT---TCAAATGATTC 44118
||| || ||||| || ||||| | ||||| || ||| || ||
Sbjct 2850515 CCCTTGTGTTGCGAGGAAAGCTGAGTGGGCGTTACGTTGGATCGATGGTTCA---GAATC 2850571
Query 44119 TTTTGGAGAACGACTTGTCGCGTTTGCAGTTGTGGAAGGCATTTTCTTTTCAGGATCGTT 44178
|| | || || ||||| |||||||| ||| ||||| |||||||| || ||| ||
Sbjct 2850572 CTTCGCTGAGCGCCTTGTTGCGTTTGCTTGTGTTGAAGGAATTTTCTTCTCTGGAAGCTT 2850631
Query 44179 TGCGGCCATATTTTGGTTAAAGAAACGAGGTTTGATGCCTGGGTTGACGTTTTCAAATGA 44238
|| ||||| ||| | ||||| ||||| | |||||||| | || || ||||| ||
Sbjct 2850632 CTGTGCTATATTCTGGCTTAAGAAGAGAGGTCTTATGCCTGGACTTACCTTCTCAAACGA 2850691
Query 44239 GTTAATAAGTCGTGATGAAGGCTTACATTGCGATTTTGCTTGCTTGTTACTTGGA-TATC 44297
||| ||| || |||||||| | ||||| ||||| ||||||||| ||| | | ||
Sbjct 2850692 GTTGATATCGCGAGATGAAGGGCTTCATTGTGATTTCGCTTGCTTG----TTGTACTCTC 2850747
Query 44298 TA--GGAGACGATAAGCCTTCATGTAAGACAATTACAGATATTGTTGTAGAGGCAGTAAA 44355
|| | ||| |||||| |||| || | | | ||||| || || || |
Sbjct 2850748 TAATGAAGA--ATAAGCTTTCAGAGGAGCGTGTGAAGGGGATTGTGCGTGATGCTGTGGA 2850805
Query 44356 GATAGAACAAGA----ATTTATGACAACAGCA-TTACCTGTAAATTTAATAGGAATGAAT 44410
|||||| || ||| |||| ||| || | ||| || | || ||||||
Sbjct 2850806 GATAGAGAGGGAGTTTGTTTGTGAC----GCACTTCCATGT-GCGTTGGTTGGGATGAAT 2850860
Query 44411 GAACTTTTGATGAACCAATATATTGAATACATTGCAGATCGTTTACTTTTGGAACTGGGT 44470
| ||||||||| ||||||||||| | |||| ||| | ||| | | || ||
Sbjct 2850861 GGGGTTTTGATGAGTCAATATATTGAGTTTGTTGCGGATAGGTTATTGGGTGCGCTTGGG 2850920
Query 44471 TGCGATAAACACTATATTGTACAAAACCCGTTTGATTTTATGGAAAATATTTCGTTGGAA 44530
|| | ||| ||| ||| || ||||||||||||| |||||| |||||| | ||
Sbjct 2850921 TGTGGTAAGGTGTATGATGTGCAGAACCCGTTTGATTGGATGGAACTAATTTCGCTTCAA 2850980
Query 44531 GGCAAAACAAACTTTTTTGAAAAACGCGTTGGAGAATATCAG 44572
|| || || || || ||||| || | ||||| || ||||||
Sbjct 2850981 GGGAAGACTAATTTCTTTGAGAAGAGGGTTGGTGATTATCAG 2851022
>seq8
Length=25521646
Score = 84.2 bits (92), Expect = 2e-11
Identities = 99/133 (74%), Gaps = 1/133 (1%)
Strand=Plus/Minus
Query 41069 TTTGTTATGTCAGTTTTACGTTTGCAATGGTGAACTGTCATGTCAATTGTATCAAAGATC 41128
||| || || ||||| || || ||||| || | || || ||| |||||||| ||||
Sbjct 24540641 TTTATTTTG-CAGTTCTATGTAGCAAATGGGGAGTTATCCTGCCAAATGTATCAACGATC 24540583
Query 41129 AGGTGACATGGGACTAGGGGTCCCGTTTAACATAGCGAGTTATGCTCTGCTCACGTATAT 41188
| ||||||||| || || || ||||||||||| || |||||| ||||| || | ||
Sbjct 24540582 TGCTGACATGGGCCTGGGTGTGCCGTTTAACATTGCATCTTATGCGCTGCTGACATGCAT 24540523
Query 41189 GATTGCACACGTT 41201
|||||| || |||
Sbjct 24540522 GATTGCTCATGTT 24540510
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 397390252455865
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |