Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lupinus_20angustifolius_20[refseq_20GCF_5F001865875.1_202016-11-16] 13,573 sequences; 609,203,021 total letters Query= NC_027923.1 Length=132831 Score E Sequences producing significant alignments: (Bits) Value seq19 134 1e-26 seq17 113 4e-20 seq3 113 4e-20 seq4 104 2e-17 seq18 98.7 8e-16 seq6 95.1 1e-14 seq12525 89.7 4e-13 >seq19 Length=18159812 Score = 134 bits (148), Expect = 1e-26 Identities = 150/198 (76%), Gaps = 2/198 (1%) Strand=Plus/Minus Query 27051 GTAGAGTCTTTTTGAATATTGTAGTC-GCTCATGTTGCGCTCGTCTTCGAGCTGTTTACC 27109 ||||| || |||||||||||||| || ||| ||| | | ||||| || |||||||| Sbjct 4557344 GTAGATTCCTTTTGAATATTGTAATCAGCTAGGGTTCTTC-CATCTTCAAGTTGTTTACC 4557286 Query 27110 GGCGTAAATGAGACGCTGTTGATCCGGCGGCACACCCTCTTTATCGGCGATCTTGTTTTT 27169 ||| |||| | ||| |||||||| || || || || |||||||| ||||||| ||| Sbjct 4557285 AGCGAAAATCAAACGTTGTTGATCTGGTGGAACTCCTTCTTTATCTTGGATCTTGGCTTT 4557226 Query 27170 CAGGGTTTCTACAGTGTCTGTGGCTTCAACTTCTAGAGTTATAGATTTGCCCGTCAGAGT 27229 || | || | ||||| || |||||||||||| ||||| | ||| ||||| || || Sbjct 4557225 CACATTGTCGATTGTGTCACTGCTTTCAACTTCTAGGGTTATTGTTTTACCCGTTAGGGT 4557166 Query 27230 TTTCACAAAGATTTGCAT 27247 |||||| ||||| ||||| Sbjct 4557165 TTTCACGAAGATCTGCAT 4557148 Score = 102 bits (112), Expect = 7e-17 Identities = 148/209 (71%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 27039 ACCAAATGTAACGTAGAGTCTTTTTGAATATTGTAGTCGCTCATGTTGCGCTCGTCTTCG 27098 |||||||| | || || || ||||| || || ||||| || | | ||| | || || Sbjct 4940870 ACCAAATGAAGGGTGGACTCCTTTTGGATGTTATAGTCTGCCAGGGTACGCCCATCCTCA 4940811 Query 27099 AGCTGTTTACCGGCGTAAATGAGACGCTGTTGATCCGGCGGCACACCCTCTTTATCGGCG 27158 ||||| || || ||| | ||||||||||| ||||| || || | ||| || ||||| | Sbjct 4940810 AGCTGCTTTCCAGCGAAGATGAGACGCTGCTGATCTGGTGGGATACCTTCCTTATCCTGG 4940751 Query 27159 ATCTTGTTTTTCAGGGTTTCTACAGTGTCTGTGGCTTCAACTTCTAGAGTTATAGATTTG 27218 ||||| |||| | |||| || |||| |||||||| ||||| || | ||| Sbjct 4940750 ATCTTAGCCTTCACATTATCTATGGTATCTGAACTCTCAACTTCGAGAGTGATGGTCTTG 4940691 Query 27219 CCCGTCAGAGTTTTCACAAAGATTTGCAT 27247 || || || || || || ||||||||||| Sbjct 4940690 CCAGTAAGGGTCTTAACGAAGATTTGCAT 4940662 Score = 95.1 bits (104), Expect = 1e-14 Identities = 149/211 (71%), Gaps = 2/211 (1%) Strand=Plus/Minus Query 27039 ACCAAATGTAACGTAGAGTCTTTTTGAATATTGTAGTC-GCTCATGTTGCGCTCGTCTTC 27097 |||||||| | || || || ||||| || || ||||| ||| | | | ||| | || || Sbjct 4941326 ACCAAATGAAGGGTGGACTCCTTTTGGATGTTATAGTCTGCT-AGGGTACGCCCATCCTC 4941268 Query 27098 GAGCTGTTTACCGGCGTAAATGAGACGCTGTTGATCCGGCGGCACACCCTCTTTATCGGC 27157 ||||| || || ||| | ||||||||||| || ||||| || | ||| || ||||| Sbjct 4941267 AAGCTGCTTGCCAGCGAAGATGAGACGCTGCTGGTCCGGAGGGATACCTTCCTTATCCTG 4941208 Query 27158 GATCTTGTTTTTCAGGGTTTCTACAGTGTCTGTGGCTTCAACTTCTAGAGTTATAGATTT 27217 ||||||| |||| | || | ||||| | || || || | ||| || | || Sbjct 4941207 GATCTTGGCCTTCACATTGTCGATTGTGTCCGAACTCTCTACCTCCAAAGTGATTGTCTT 4941148 Query 27218 GCCCGTCAGAGTTTTCACAAAGATTTGCATA 27248 ||| || ||||| |||||||| || |||||| Sbjct 4941147 GCCAGTAAGAGTCTTCACAAAAATCTGCATA 4941117 >seq17 Length=21299880 Score = 113 bits (124), Expect = 4e-20 Identities = 143/197 (73%), Gaps = 0/197 (0%) Strand=Plus/Minus Query 27051 GTAGAGTCTTTTTGAATATTGTAGTCGCTCATGTTGCGCTCGTCTTCGAGCTGTTTACCG 27110 || || || || || || ||||||||| | | |||| ||||||| |||||||| ||| Sbjct 4985011 GTTGATTCCTTCTGGATGTTGTAGTCGGCGAGGGTGCGACCGTCTTCAAGCTGTTTTCCG 4984952 Query 27111 GCGTAAATGAGACGCTGTTGATCCGGCGGCACACCCTCTTTATCGGCGATCTTGTTTTTC 27170 ||| | ||||||||||| || ||||| || | || || || || ||||||| || Sbjct 4984951 GCGAAGATGAGACGCTGCTGGTCCGGTGGGATTCCTTCCTTGTCTTGGATCTTGGCCTTG 4984892 Query 27171 AGGGTTTCTACAGTGTCTGTGGCTTCAACTTCTAGAGTTATAGATTTGCCCGTCAGAGTT 27230 | | || | || || | || ||||||||| || || || | ||| ||||| || ||| Sbjct 4984891 ACATTGTCGATGGTATCGGAGGATTCAACTTCGAGGGTGATGGTTTTCCCCGTTAGGGTT 4984832 Query 27231 TTCACAAAGATTTGCAT 27247 ||||| ||||| ||||| Sbjct 4984831 TTCACGAAGATCTGCAT 4984815 >seq3 Length=30153019 Score = 113 bits (124), Expect = 4e-20 Identities = 143/197 (73%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 27051 GTAGAGTCTTTTTGAATATTGTAGTCGCTCATGTTGCGCTCGTCTTCGAGCTGTTTACCG 27110 || || || || || || ||||||||| | | |||| ||||||| |||||||| ||| Sbjct 15142523 GTTGATTCCTTCTGGATGTTGTAGTCGGCGAGGGTGCGACCGTCTTCAAGCTGTTTTCCG 15142582 Query 27111 GCGTAAATGAGACGCTGTTGATCCGGCGGCACACCCTCTTTATCGGCGATCTTGTTTTTC 27170 ||| | ||||||||||| || ||||| || | || || || || ||||||| || Sbjct 15142583 GCGAAGATGAGACGCTGCTGGTCCGGTGGGATTCCTTCCTTGTCTTGGATCTTGGCCTTG 15142642 Query 27171 AGGGTTTCTACAGTGTCTGTGGCTTCAACTTCTAGAGTTATAGATTTGCCCGTCAGAGTT 27230 | | || | || || | || ||||||||| || || || | ||| ||||| || ||| Sbjct 15142643 ACATTGTCGATGGTATCGGAGGATTCAACTTCGAGGGTGATGGTTTTCCCCGTTAGGGTT 15142702 Query 27231 TTCACAAAGATTTGCAT 27247 ||||| ||||| ||||| Sbjct 15142703 TTCACGAAGATCTGCAT 15142719 >seq4 Length=27333975 Score = 104 bits (114), Expect = 2e-17 Identities = 141/197 (72%), Gaps = 0/197 (0%) Strand=Plus/Minus Query 27051 GTAGAGTCTTTTTGAATATTGTAGTCGCTCATGTTGCGCTCGTCTTCGAGCTGTTTACCG 27110 || || || || || || ||||||||| | | |||| |||||||||||||||| ||| Sbjct 22406907 GTGGACTCCTTCTGGATGTTGTAGTCGGCGAGGGTGCGACCGTCTTCGAGCTGTTTTCCG 22406848 Query 27111 GCGTAAATGAGACGCTGTTGATCCGGCGGCACACCCTCTTTATCGGCGATCTTGTTTTTC 27170 ||| | ||||| || || || ||||| || | || || || || ||||||| ||| Sbjct 22406847 GCGAAGATGAGGCGTTGCTGGTCCGGTGGAATTCCTTCCTTGTCTTGGATCTTGGCCTTC 22406788 Query 27171 AGGGTTTCTACAGTGTCTGTGGCTTCAACTTCTAGAGTTATAGATTTGCCCGTCAGAGTT 27230 | | || | ||||| | | |||||| || || ||||| | || ||||| || ||| Sbjct 22406787 ACATTGTCGATTGTGTCGGAAGATTCAACCTCAAGGGTTATCGTCTTACCCGTTAGGGTT 22406728 Query 27231 TTCACAAAGATTTGCAT 27247 ||||| || || ||||| Sbjct 22406727 TTCACGAAAATCTGCAT 22406711 Score = 95.1 bits (104), Expect = 1e-14 Identities = 139/197 (71%), Gaps = 0/197 (0%) Strand=Plus/Minus Query 27051 GTAGAGTCTTTTTGAATATTGTAGTCGCTCATGTTGCGCTCGTCTTCGAGCTGTTTACCG 27110 || || ||||| || |||||||||||| | | |||| |||| || |||||||| ||| Sbjct 24477358 GTTGATTCTTTCTGGATATTGTAGTCGGCGAGGGTGCGACCGTCCTCTAGCTGTTTTCCG 24477299 Query 27111 GCGTAAATGAGACGCTGTTGATCCGGCGGCACACCCTCTTTATCGGCGATCTTGTTTTTC 27170 ||| | || |||||||| || || || || | || || || || ||||| ||| Sbjct 24477298 GCGAAGATCAGACGCTGCTGGTCAGGTGGAATTCCTTCCTTGTCCTGAATCTTAGCTTTT 24477239 Query 27171 AGGGTTTCTACAGTGTCTGTGGCTTCAACTTCTAGAGTTATAGATTTGCCCGTCAGAGTT 27230 | | | || | ||||| | | || || ||||| || || | || || || || ||| Sbjct 24477238 ACGTTATCGATTGTGTCGGAGCTCTCCACCTCTAGGGTGATGGTCTTTCCGGTTAGGGTT 24477179 Query 27231 TTCACAAAGATTTGCAT 27247 ||||| ||||||||||| Sbjct 24477178 TTCACGAAGATTTGCAT 24477162 >seq18 Length=16588007 Score = 98.7 bits (108), Expect = 8e-16 Identities = 140/197 (71%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 27051 GTAGAGTCTTTTTGAATATTGTAGTCGCTCATGTTGCGCTCGTCTTCGAGCTGTTTACCG 27110 || || || || ||||||||||| ||| | |||| |||||||||| ||||| ||| Sbjct 12189697 GTCGACTCCTTCTGAATATTGTAATCGGCGAGAGTGCGACCGTCTTCGAGTTGTTTTCCG 12189756 Query 27111 GCGTAAATGAGACGCTGTTGATCCGGCGGCACACCCTCTTTATCGGCGATCTTGTTTTTC 27170 ||| | || | |||||| || ||||| || | || || || || ||||||| || Sbjct 12189757 GCGAAGATCAAACGCTGCTGGTCCGGTGGAATTCCTTCCTTGTCTTGGATCTTGGCCTTG 12189816 Query 27171 AGGGTTTCTACAGTGTCTGTGGCTTCAACTTCTAGAGTTATAGATTTGCCCGTCAGAGTT 27230 | | || | || || | || |||||| || || || || | ||| ||||| || ||| Sbjct 12189817 ACATTGTCGATGGTATCGGAGGATTCAACCTCGAGGGTAATGGTTTTACCCGTTAGGGTT 12189876 Query 27231 TTCACAAAGATTTGCAT 27247 ||||| ||||| ||||| Sbjct 12189877 TTCACGAAGATCTGCAT 12189893 >seq6 Length=33111450 Score = 95.1 bits (104), Expect = 1e-14 Identities = 139/197 (71%), Gaps = 0/197 (0%) Strand=Plus/Minus Query 27051 GTAGAGTCTTTTTGAATATTGTAGTCGCTCATGTTGCGCTCGTCTTCGAGCTGTTTACCG 27110 || || || || || |||||||| ||| | | |||| |||| || || || || ||| Sbjct 5099842 GTTGATTCCTTCTGGATATTGTAATCGGCGAGGGTGCGGCCGTCCTCAAGTTGCTTTCCG 5099783 Query 27111 GCGTAAATGAGACGCTGTTGATCCGGCGGCACACCCTCTTTATCGGCGATCTTGTTTTTC 27170 ||| | || || ||||| || ||||| || | || || || || ||||||| || Sbjct 5099782 GCGAAGATCAGTCGCTGCTGGTCCGGTGGGATTCCTTCCTTGTCCTGGATCTTGGCCTTG 5099723 Query 27171 AGGGTTTCTACAGTGTCTGTGGCTTCAACTTCTAGAGTTATAGATTTGCCCGTCAGAGTT 27230 | | || | ||||| | || ||||| || || ||||| | ||| ||||| || ||| Sbjct 5099722 ACATTGTCGATGGTGTCAGAGGACTCAACCTCGAGGGTTATGGTTTTACCCGTTAGGGTT 5099663 Query 27231 TTCACAAAGATTTGCAT 27247 ||||||||||| ||||| Sbjct 5099662 TTCACAAAGATCTGCAT 5099646 Score = 89.7 bits (98), Expect = 4e-13 Identities = 156/227 (69%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 27021 CCTCCGCGCAACCGCAATACCAAATGTAACGTAGAGTCTTTTTGAATATTGTAGTCGCTC 27080 ||||| | ||| |||| ||||||||| | ||||| || || || || || || || | Sbjct 6669104 CCTCCCCTCAAACGCAGTACCAAATGAAGAGTAGACTCCTTCTGGATGTTATAATCTGCC 6669045 Query 27081 ATGTTGCGCTCGTCTTCGAGCTGTTTACCGGCGTAAATGAGACGCTGTTGATCCGGCGGC 27140 | | | | ||||| || || || || || | || || | ||||||||| || || Sbjct 6669044 AAAGTCCTTCCATCTTCAAGTTGCTTTCCAGCAAATATAAGCCTCTGTTGATCTGGTGGA 6668985 Query 27141 ACACCCTCTTTATCGGCGATCTTGTTTTTCAGGGTTTCTACAGTGTCTGTGGCTTCAACT 27200 | |||||| ||||| ||||||| || | | || | ||||| | ||| || Sbjct 6668984 ATACCCTCCTTATCTTGGATCTTGGCCTTAACATTGTCAATGGTGTCAGAACTTTCCACC 6668925 Query 27201 TCTAGAGTTATAGATTTGCCCGTCAGAGTTTTCACAAAGATTTGCAT 27247 || || || || | ||||| || || |||||||||||||||||||| Sbjct 6668924 TCAAGGGTGATGGTCTTGCCAGTTAGGGTTTTCACAAAGATTTGCAT 6668878 >seq12525 Length=279716 Score = 89.7 bits (98), Expect = 4e-13 Identities = 138/197 (70%), Gaps = 0/197 (0%) Strand=Plus/Minus Query 27051 GTAGAGTCTTTTTGAATATTGTAGTCGCTCATGTTGCGCTCGTCTTCGAGCTGTTTACCG 27110 || || || ||||| || ||||||||| | | |||| | ||||| || ||||| || Sbjct 229761 GTGGACTCCTTTTGGATGTTGTAGTCGGCGAGGGTGCGGCCATCTTCAAGTTGTTTTCCA 229702 Query 27111 GCGTAAATGAGACGCTGTTGATCCGGCGGCACACCCTCTTTATCGGCGATCTTGTTTTTC 27170 || | |||||||| || |||||||| || | || || || || |||||| || Sbjct 229701 GCAAAGATGAGACGTTGCTGATCCGGTGGGATCCCTTCCTTGTCTTGGATCTTAGCCTTA 229642 Query 27171 AGGGTTTCTACAGTGTCTGTGGCTTCAACTTCTAGAGTTATAGATTTGCCCGTCAGAGTT 27230 | | | || | ||||| | |||||||| ||||| || | ||||| || || || Sbjct 229641 ACGTTGTCAATGGTGTCAGAACTCTCAACTTCGAGAGTAATGGTCTTGCCGGTGAGGGTC 229582 Query 27231 TTCACAAAGATTTGCAT 27247 || |||||||||||||| Sbjct 229581 TTGACAAAGATTTGCAT 229565 Score = 89.7 bits (98), Expect = 4e-13 Identities = 139/199 (70%), Gaps = 0/199 (0%) Strand=Plus/Minus Query 27050 CGTAGAGTCTTTTTGAATATTGTAGTCGCTCATGTTGCGCTCGTCTTCGAGCTGTTTACC 27109 ||| || || ||||| || |||||||| | | |||| | || ||||||||||| || Sbjct 229990 CGTGGACTCCTTTTGGATGTTGTAGTCTGCAAGGGTGCGGCCATCCTCGAGCTGTTTTCC 229931 Query 27110 GGCGTAAATGAGACGCTGTTGATCCGGCGGCACACCCTCTTTATCGGCGATCTTGTTTTT 27169 || | || || | ||| || || || || | ||||| ||||| ||||||| || Sbjct 229930 AGCAAAGATCAGCCTCTGCTGGTCTGGTGGAATTCCCTCCTTATCCTGGATCTTGGCCTT 229871 Query 27170 CAGGGTTTCTACAGTGTCTGTGGCTTCAACTTCTAGAGTTATAGATTTGCCCGTCAGAGT 27229 | | |||| |||||| | | ||||| || || || || | ||||| || || || Sbjct 229870 AACATTATCTATAGTGTCAGAGCTCTCAACCTCAAGGGTGATGGTCTTGCCAGTGAGGGT 229811 Query 27230 TTTCACAAAGATTTGCATA 27248 ||||||||||| |||||| Sbjct 229810 CTTCACAAAGATCTGCATA 229792 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 424864106953176