Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lupinus_20angustifolius_20[refseq_20GCF_5F001865875.1_202016-11-16] 13,573 sequences; 609,203,021 total letters Query= NC_028091.1 Length=196300 Score E Sequences producing significant alignments: (Bits) Value seq2 122 1e-22 seq15 118 1e-21 seq12 109 7e-19 seq12587 105 8e-18 seq1 98.7 1e-15 seq16 96.9 4e-15 seq11 95.1 2e-14 seq7 89.7 6e-13 >seq2 Length=24697652 Score = 122 bits (134), Expect = 1e-22 Identities = 117/150 (78%), Gaps = 0/150 (0%) Strand=Plus/Plus Query 122670 GTGGAGACCCTCATCTCGGGAAATAAGTTCATTTGAGAAGCATAGACCTGGCATGAGACC 122729 ||| | |||||||||||| || || | || ||||||||| ||||| ||||| || || Sbjct 21046927 GTGTAAACCCTCATCTCGCGAGATTAACTCGTTTGAGAAGGTAAGACCAGGCATAAGGCC 21046986 Query 122730 CCGCTTCTTCAACCAATAAATAGCGCAGAATGACCCGGAGAAGAAGATACCCTCCACACA 122789 || |||||||||||| | || || ||||| || |||||||| ||||| || ||||| Sbjct 21046987 TCGTTTCTTCAACCAAAATATCGCACAGAAGCTTCCAGAGAAGAAAATACCTTCAACACA 21047046 Query 122790 CGCAAACGCAAAAAGGCGTTCGGCGAAGGA 122819 |||||||||| || ||||| |||||||| Sbjct 21047047 AGCAAACGCAACGAGACGTTCAGCGAAGGA 21047076 >seq15 Length=20964703 Score = 118 bits (130), Expect = 1e-21 Identities = 200/285 (70%), Gaps = 6/285 (2%) Strand=Plus/Minus Query 11452 ATCAAAACGACCCGGGCGAAGGAGGGCGTCATCAAGGATATCCACGCGATTAGTGGCCGC 11511 |||||| |||||||| | | | |||| |||||| | ||| | || || || || Sbjct 20644054 ATCAAATCGACCCGGCCTTAACAAGGCGGAATCAAGAACATCAGGTCTGTTGGTCGCAGC 20643995 Query 11512 AATAACCACAATGCCAGTCTCATTGTCAAAGCCATCCATCTCGGTGAGTAATTGATTAAT 11571 | ||| | || |||| | | ||| |||||||||||||| | ||| || ||||| Sbjct 20643994 CAAAACTATAACACCAGAATTACCAGAAAACCCATCCATCTCGGTCAATAACTGGTTAAT 20643935 Query 11572 TGTTTGTTCTCTCTCATCATTTGCTGGCATACC--ACCAGCACTGCGTTGCTTGCCCACC 11629 |||||||| ||||||||||| | | | || ||| |||| | ||| | ||||| Sbjct 20643934 AGTTTGTTCCCTCTCATCATT--CCCACCTCCCATACCTGCACCCCTTTGTCTTCCCACA 20643877 Query 11630 GCATCAATCTCATCAATGAAGACAATACATGGTTGATTTTCGC-GGGCGATTTCAAAGAG 11688 |||||||| ||||| || || ||||| || || | ||| | || ||||||| | Sbjct 20643876 GCATCAATTTCATCTATAAAAACAATGCAAGG-CGCTTTCGACTTCGCCTTTTCAAACAA 20643818 Query 11689 ATCGCGAACCCTTTTGGCACCCACACCAACAAACATCTCCACAAA 11733 ||| | ||||||| ||||| ||||||||||||| |||||||| Sbjct 20643817 ATCTCTAACCCTTGAAGCACCAACACCAACAAACAATTCCACAAA 20643773 >seq12 Length=19065701 Score = 109 bits (120), Expect = 7e-19 Identities = 246/365 (67%), Gaps = 6/365 (2%) Strand=Plus/Plus Query 11453 TCAAAACGACCCGGGCGAAGGAGGGCGTCATCAAGGATATCCACGCGATTAGTGGCCGCA 11512 ||||| |||||||| | | | ||| ||||| || || | | ||||| || ||| Sbjct 8127039 TCAAACCGACCCGGTCTCAATAAGGCAGAGTCAAGAATGTCGGCTCTGTTAGTTGCTGCA 8127098 Query 11513 ATAACCACAATGCCAGTCTCATTGTCAAAGCCATCCATCTCGGTGAGTAATTGATTAATT 11572 | ||| | || ||||| | | ||||| |||||||| || || | | ||| || | Sbjct 8127099 ACAACAATGATACCAGTATTACCCTCAAACCCATCCATTTCTGTCAAAAGTTGGTTGAGG 8127158 Query 11573 GTTTGTTCTCTCTCATCATTTGCTGGCATACCA--CCAGCACTGCGTTGCTTGCCCACCG 11630 || |||||||| |||||||| || | | | | || | | | ||| | || || | Sbjct 8127159 GTCTGTTCTCTTTCATCATTCCCT--CCTCCAATTCCGGTCCCTCTTTGTCTTCCAACAG 8127216 Query 11631 CATCAATCTCATCAATGAAGACAATACATGGTTGATTTTCGCGGGCGATTTCAAAGAGAT 11690 ||||||| ||||||| ||| ||||||||||| ||| || ||| | | || | || Sbjct 8127217 CATCAATTTCATCAACGAACACAATACATGGGGCATTCTCTTTGGCCTTCTTGAACAAAT 8127276 Query 11691 CGCGAACCCTTTTGGCACCCACACCAACAAACATCTCCACAAAGTTTGCGGCAGAGCACT 11750 | || |||| ||||| ||||||||||||||||| ||||| | | | ||| | | Sbjct 8127277 CACGTACCCGAGAAGCACCAACACCAACAAACATCTCAACAAACTCAGAACCTGAG-ATT 8127335 Query 11751 G-GATGAATGGGACATTTGATTCACCCGCGATGGCTCGGGCGAGGAGGGTCTTTCCCGTA 11809 | || ||||| ||| | |||||| || || || ||| | || ||||| || || Sbjct 8127336 GAGAAAAATGGAACACCAGCTTCACCAGCAATAGCCTTGGCTAACAGTGTCTTCCCTGTT 8127395 Query 11810 CCTGG 11814 ||||| Sbjct 8127396 CCTGG 8127400 >seq12587 Length=87510 Score = 105 bits (116), Expect = 8e-18 Identities = 249/364 (68%), Gaps = 19/364 (5%) Strand=Plus/Minus Query 27662 CACTTTGCCGCACAAAGTCATGTAGACAATTCATTTAC-AAGTCCTCTTGGGTTTACTTT 27720 |||||||| ||||||| |||||||| ||||| ||| || ||| | | || || | Sbjct 86929 CACTTTGCTGCACAAACCCATGTAGATAATTCCTTTGGTAACTCCA-TGGAATTCACCTA 86871 Query 27721 AGACAATACATATGGTACACATACACTCATTGAAGTCTGTAGGCGTCACATACCAAATGT 27780 |||||| ||||||||||||| || |||||| |||||| ||||| |||| ||| Sbjct 86870 CAACAATATATATGGTACACATGTTCTTCTTGAAGGTTGTAGG-GTCACTGACCA--TGT 86814 Query 27781 TGAA---TTTATACATTTTAGTACAGATGAAGTATACGGTGAATCAAAAACAGGT--GAA 27835 | || || || ||| |||| || ||||||||||| |||||| | || || | || Sbjct 86813 TAAAAGATTCATCCATGTTAGCACTGATGAAGTATATGGTGAAACTAAGTTAGATACTAA 86754 Query 27836 CCTT--TCACC--GAAGACACTGGGGTACTTAGACCAACAAATCCATATTCAGCATCAAA 27891 || | ||| || | || | | ||| |||||||| || || |||||| |||| Sbjct 86753 TGTTGGTAACCATGAGGCTTCTCAGCTTCTT---CCAACAAACCCTTACTCAGCAACAAA 86697 Query 27892 AGCGGCGGCCGAAATGATAGTCCGTTCATA-TATAGAATCATTTGATATGAATATCAAAA 27950 ||| | || |||||| | | | |||| |||| || | || | | || | || Sbjct 86696 AGCAGGTGCAGAAATGTTGGCCATGGCATACCATAG-GTCCTATGGTCTTCCAATTATAA 86638 Query 27951 TAATTCGCTGTAATAATGTTTATGGTCCAAATCAATACCCGGAGAAACTCATTCCAAAGT 28010 | | | ||||||||||||||||| || |||||||| || || || |||| |||| Sbjct 86637 CCTCTAGAGGAAATAATGTTTATGGTCCTAACCAATACCCAGAAAAGCTTGTTCCTAAGT 86578 Query 28011 TTAT 28014 | || Sbjct 86577 TAAT 86574 >seq1 Length=36457581 Score = 98.7 bits (108), Expect = 1e-15 Identities = 160/228 (70%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 111940 CTGCGGTCTTGGTGTACCAGCATTGAAGAGGGTTGGTGTTGCGTGAATGAACATACCTTG 111999 ||| || || ||||| || |||||||| || || || | ||| ||| ||||| | || Sbjct 33689431 CTGAGGCCTAGGTGTTCCGGCATTGAATAGAGTAGGAGATGCATGAGTGAACCATCTCTG 33689490 Query 112000 GGACATCTTGTCGTATGTCTCCAAGACAGAATCAATGTCTTCCCCGTGGATGCCGATTGC 112059 ||||| || ||| || | | ||||||||||||| ||| ||| || || | | Sbjct 33689491 AGACATTAGGTGGTAAGTTTTGACAGCAGAATCAATGTCATCCTTGTGAATTCCAACAGA 33689550 Query 112060 GACCCGCATGAACATGTACTGTGGGGTTTCCATGAGGATGCCATCGAGCCGTTGA-AGAT 112118 |||| ||| ||||||| ||| || |||| | | | || || | || | | || | Sbjct 33689551 AACCCTCATCAACATGTGCTGAGGTCTTTCAACAACTTTTCCTTC-AACCTTCAACAGGT 33689609 Query 112119 AGCTCTTCTCAAGGGTTTTGAGACCAAAGTAACCAAAATCATAGTCCC 112166 || | ||||||||||||||| |||||||||| || | ||| |||||| Sbjct 33689610 AGGACCTCTCAAGGGTTTTGAAACCAAAGTAATCATAGTCAAAGTCCC 33689657 >seq16 Length=20786881 Score = 96.9 bits (106), Expect = 4e-15 Identities = 278/422 (66%), Gaps = 12/422 (3%) Strand=Plus/Plus Query 11483 TCAAGGATATCCACGCGATTAGTGGCCGCAATAACCACAATGCCA---GTCTCATTGTCA 11539 ||||| || || | | ||||| || ||||| ||||||| || || | | ||| Sbjct 9801844 TCAAGAATGTCAGCTCTGTTAGTTGCTGCAAT---CACAATGACACCGGTATTACCCTCA 9801900 Query 11540 AAGCCATCCATCTCGGTGAGTAATTGATTAATTGTTTGTTCTCTCTCATCATTTGCTGGC 11599 || |||||||| || || | | ||| |||| ||||||||||| ||||| || || | Sbjct 9801901 AACCCATCCATTTCTGTCAAAAGTTGGTTAAGGGTTTGTTCTCTTTCATCGTTCCCT--C 9801958 Query 11600 ATACCA--CCAGCACTGCGTTGCTTGCCCACCGCATCAATCTCATCAATGAAGACAATAC 11657 ||| |||| || | |||| | || || || ||||| ||||||| || ||||| | Sbjct 9801959 CACCCATTCCAGTACCTCTTTGCCTTCCAACAGCGTCAATTTCATCAACAAAAACAATGC 9802018 Query 11658 ATGGTTGATTTTCGCGGGCGATTTCAAAGAGATCGCGAACCCTTTTGGCACCCACACCAA 11717 | || ||| || ||| | | || | ||| || || | ||||| ||||||| Sbjct 9802019 AAGGAGAATTCTCTTTGGCCTTCTTGAATAAATCACGGACTCGAGAAGCACCAACACCAA 9802078 Query 11718 CAAACATCTCCACAAAGTTTGCGGCAGAGCACTG-GATGAATGGGACATTTGATTCACCC 11776 |||||||||| ||||| | | | ||| | || || || |||||| || |||||| Sbjct 9802079 CAAACATCTCAACAAACTCAGAACCCGAG-ATTGAGAAAAAAGGGACACCTGCTTCACCA 9802137 Query 11777 GCGATGGCTCGGGCGAGGAGGGTCTTTCCCGTACCTGGCTTACCCGCGAGAAGGGCGCCT 11836 || || || || | || ||||| || || ||||| ||| | ||||| | ||| Sbjct 9802138 GCAATAGCCTTCGCTAATAGCGTCTTCCCAGTTCCTGGAGGACCAACAAGAAGAACTCCT 9802197 Query 11837 CGGGGGATCTTGGCACCACTTCCAAAATATCTCTCGGGTTGCTTGAGAAAATCCACAATC 11896 ||| || || || || |||||||||| | ||| ||||| || || | | Sbjct 9802198 TTGGGTATGCGAGCCCCGACAGCAGTGAATCTCTCGGGCTTCTTCAGAAACTCGACCACC 9802257 Query 11897 TC 11898 || Sbjct 9802258 TC 9802259 >seq11 Length=35963958 Score = 95.1 bits (104), Expect = 2e-14 Identities = 168/242 (69%), Gaps = 6/242 (2%) Strand=Plus/Minus Query 111927 AGCAACTGGACATCTGCGGTCTTGGTGTACCAGCATTGAAGAGGGTTGGTGTTGCGTGAA 111986 |||||| | || ||| || || ||||| || |||||||| || || || | ||| ||| Sbjct 31406465 AGCAACCGTAC--CTGAGGCCTAGGTGTCCCGGCATTGAACAGAGTAGGAGATGCATGAG 31406408 Query 111987 TGAACATACCTTGGGACATCTTGTCGTATGTCTCCAAGACAGAATCAATGTCTTCCCCGT 112046 ||||| | || |||||| | |||||| | | ||||||| |||| ||| || Sbjct 31406407 TGAACCATCTCTGTGACATCAGATGGTATGTTTTGACAGCAGAATCTATGTTATCCTTGT 31406348 Query 112047 GGATGCCGATTGCGACCCGCATGAACATGTACTGTGGGGTTTCCATGAGGATGCCATCGA 112106 | || || | | |||| ||| ||||||| ||| || |||| | | || || | Sbjct 31406347 GAATTCCAACAGAAACCCTCATCAACATGTGCTGAGGTCTTTCAACAACTTGTCCTTCAA 31406288 Query 112107 GCCGTTGAAGA--TAGCTCTTCTCAAGGGTTTTGAGACCAAAGTAACCAAAATCATAGTC 112164 | || |||| ||| | ||||||||||||||| |||||||||| || | ||| |||| Sbjct 31406287 CC--TTCAAGAGGTAGGACCTCTCAAGGGTTTTGAAACCAAAGTAATCATAGTCAAAGTC 31406230 Query 112165 CC 112166 || Sbjct 31406229 CC 31406228 >seq7 Length=19782170 Score = 89.7 bits (98), Expect = 6e-13 Identities = 241/367 (66%), Gaps = 14/367 (4%) Strand=Plus/Minus Query 11539 AAAGCCATCCATCTCGGTGAGTAATTGATTAATTGTTTGTTCTCTCTCATCATTTGCTGG 11598 ||| || |||||||| || | | |||||||| || ||||| ||||||||||| || Sbjct 7716243 AAACCCGTCCATCTCAGTCAACAGCTGATTAATAGTCTGTTCCCTCTCATCATTCCCTCC 7716184 Query 11599 CATACCACCAGCACTGCGTTGCTTGCCCACCGCATCAATCTCATCAATGAAGACAATACA 11658 | |||||| | | ||| | || ||||||||||||||||| || || ||||| || Sbjct 7716183 CCCCATACCAGCCCCTCTCTGCCTCCCAACCGCATCAATCTCATCGATAAACACAATGCA 7716124 Query 11659 TGG-----TTGATTTTCGCGGGCGATTTCAAAGAGATCGCGAACCCTTTTGGCACCCACA 11713 || | || ||| || | || || | ||| | ||||| |||||||| Sbjct 7716123 AGGCGCTTTCGACTTT-----GCCTTCTCGAACAAATCCCTCACCCTCGAAGCACCCACC 7716069 Query 11714 CCAACAAACATCTCCACAAAGTTTGCGGCAGAGCACTGG--ATGAATGGGACATTTGATT 11771 || ||||||| ||||||||| | || || |||| || | ||| || || | | Sbjct 7716068 CCGACAAACAGCTCCACAAATTCTGAAGC--TGCACAGGAAAAGAACGGCACGCCAGCCT 7716011 Query 11772 CACCCGCGATGGCTCGGGCGAGGAGGGTCTTTCCCGTACCTGGCTTACCCGCGAGAAGGG 11831 | || || | |||| || | || ||||| || || || || ||| | |||||| Sbjct 7716010 CCCCAGCTACCGCTCTCGCCAAAAGTGTCTTCCCTGTGCCCGGTGGTCCCACCAGAAGGC 7715951 Query 11832 CGCCTCGGGGGATCTTGGCACCACTTCCAAAATATCTCTCGGGTTGCTTGAGAAAATCCA 11891 ||| || ||||| ||||| || ||| | || || | ||| |||||||| | Sbjct 7715950 ACCCTTTCGGAATCTTAGCACCCAAGGCAGTATACTTATCAGGATTCTTCAGAAAATCAA 7715891 Query 11892 CAATCTC 11898 | | ||| Sbjct 7715890 CCACCTC 7715884 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 627925446520800