Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lupinus_20angustifolius_20[refseq_20GCF_5F001865875.1_202016-11-16] 13,573 sequences; 609,203,021 total letters Query= NC_028092.1 Length=193301 Score E Sequences producing significant alignments: (Bits) Value seq2 118 1e-21 seq16 100 4e-16 seq12 95.1 1e-14 seq11 93.3 5e-14 seq15 87.8 2e-12 seq7 82.4 9e-11 >seq2 Length=24697652 Score = 118 bits (130), Expect = 1e-21 Identities = 116/150 (77%), Gaps = 0/150 (0%) Strand=Plus/Plus Query 130027 GTGGAGACCCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGACCTGGCATGAGACC 130086 ||| | |||||| || || ||||| | || || |||||| ||||| ||||| || || Sbjct 21046927 GTGTAAACCCTCATCTCGCGAGATTAACTCGTTTGAGAAGGTAAGACCAGGCATAAGGCC 21046986 Query 130087 CCGCTTCTTCAACCAGAAAATCGCACAAAATGAGCCAGAGAAGAAGATCCCCTCCACACA 130146 || ||||||||||| || |||||||| || ||||||||||| || || || ||||| Sbjct 21046987 TCGTTTCTTCAACCAAAATATCGCACAGAAGCTTCCAGAGAAGAAAATACCTTCAACACA 21047046 Query 130147 CGCGAACGCAAAGAGACGCTCAGCAAAGGA 130176 || ||||||| |||||| ||||| ||||| Sbjct 21047047 AGCAAACGCAACGAGACGTTCAGCGAAGGA 21047076 >seq16 Length=20786881 Score = 100 bits (110), Expect = 4e-16 Identities = 229/339 (68%), Gaps = 12/339 (4%) Strand=Plus/Plus Query 14095 GTCAAGGATATCAATGCGGTTCGTCGCCGCGATGACAACGATGCCCGTCTCGTTATCAAA 14154 |||||| || ||| | ||| || || || || |||| || || || | ||||| Sbjct 9801843 GTCAAGAATGTCAGCTCTGTTAGTTGCTGCAATCACAATGACACCGGTATTACCCTCAAA 9801902 Query 14155 GCCATCCATCTCAGTCAAGAGTTGATTGATGGTTTGTTCGCGTTCATCATTCGC---AGG 14211 |||||||| || ||||| ||||| || | ||||||||| | |||||| ||| | | Sbjct 9801903 CCCATCCATTTCTGTCAAAAGTTGGTTAAGGGTTTGTTCTCTTTCATCGTTCCCTCCACC 9801962 Query 14212 CATACCACCCGCACTGCGTTGCTTACCGACGGCGTCAATTTCATCGATGAAAACGATACA 14271 ||| ||| | || | |||| | || || |||||||||||||| | ||||| || || Sbjct 9801963 CATTCCA---GTACCTCTTTGCCTTCCAACAGCGTCAATTTCATCAACAAAAACAATGCA 9802019 Query 14272 TGGTTGATTTTCACGGGCAACTTCA--AAGATATCTCGCACTCTCTTGGCACCGACACCC 14329 || ||| || ||| |||| || | ||| || |||| ||||| ||||| Sbjct 9802020 AGGAGAATTCTCTTTGGC--CTTCTTGAATAAATCACGGACTCGAGAAGCACCAACACCA 9802077 Query 14330 ACAAACATCTCCACAAAATTGGCGGCGGAACATTG-GATGAAGGGGACGTTAGATTCACC 14388 ||||||||||| ||||| | | | | | |||| || || ||||| | |||||| Sbjct 9802078 ACAAACATCTCAACAAACTCAGAACCCG-AGATTGAGAAAAAAGGGACACCTGCTTCACC 9802136 Query 14389 CGCGATGGCTCGGGCGAGGAGGGTCTTCCCCGTCCCTGG 14427 || || || || | || |||||||| || ||||| Sbjct 9802137 AGCAATAGCCTTCGCTAATAGCGTCTTCCCAGTTCCTGG 9802175 >seq12 Length=19065701 Score = 95.1 bits (104), Expect = 1e-14 Identities = 245/367 (67%), Gaps = 10/367 (3%) Strand=Plus/Plus Query 14066 TCAAAGCGACCTGGGCGGAGGAGGGCGTCGTCAAGGATATCAATGCGGTTCGTCGCCGCG 14125 ||||| ||||| || | | | ||| |||||| || || | ||| || || || Sbjct 8127039 TCAAACCGACCCGGTCTCAATAAGGCAGAGTCAAGAATGTCGGCTCTGTTAGTTGCTGCA 8127098 Query 14126 ATGACAACGATGCCCGTCTCGTTATCAAAGCCATCCATCTCAGTCAAGAGTTGATTGATG 14185 | |||| ||| || || | ||||| |||||||| || ||||| ||||| |||| | Sbjct 8127099 ACAACAATGATACCAGTATTACCCTCAAACCCATCCATTTCTGTCAAAAGTTGGTTGAGG 8127158 Query 14186 GTTTGTTCGCGTTCATCATTCGCAGGCATACCA--CCCGCACTGCGTTGCTTACCGACGG 14243 || ||||| | |||||||||| | | | | | || | | | ||| | || || | Sbjct 8127159 GTCTGTTCTCTTTCATCATTCCCT--CCTCCAATTCCGGTCCCTCTTTGTCTTCCAACAG 8127216 Query 14244 CGTCAATTTCATCGATGAAAACGATACATGGTTGATTTTCACGGGCAACTTCA--AAGAT 14301 | ||||||||||| | ||| || |||||||| ||| || ||| |||| || | Sbjct 8127217 CATCAATTTCATCAACGAACACAATACATGGGGCATTCTCTTTGGC--CTTCTTGAACAA 8127274 Query 14302 ATCTCGCACTCTCTTGGCACCGACACCCACAAACATCTCCACAAAATTGGCGGCGGAACA 14361 ||| || || | ||||| ||||| ||||||||||| ||||| | | | | | | Sbjct 8127275 ATCACGTACCCGAGAAGCACCAACACCAACAAACATCTCAACAAACTCAGAACCTG-AGA 8127333 Query 14362 TTG-GATGAAGGGGACGTTAGATTCACCCGCGATGGCTCGGGCGAGGAGGGTCTTCCCCG 14420 ||| || || || || || |||||| || || || ||| | || |||||||| | Sbjct 8127334 TTGAGAAAAATGGAACACCAGCTTCACCAGCAATAGCCTTGGCTAACAGTGTCTTCCCTG 8127393 Query 14421 TCCCTGG 14427 | ||||| Sbjct 8127394 TTCCTGG 8127400 >seq11 Length=35963958 Score = 93.3 bits (102), Expect = 5e-14 Identities = 110/149 (74%), Gaps = 0/149 (0%) Strand=Plus/Minus Query 130028 TGGAGACCCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGACCTGGCATGAGACCC 130087 || || || || || || || || | || || |||||| || || ||||| ||||| Sbjct 2850718 TGAAGCCCTTCATCTCGCGATATCAACTCGTTTGAGAAGGTAAGTCCAGGCATAAGACCT 2850659 Query 130088 CGCTTCTTCAACCAGAAAATCGCACAAAATGAGCCAGAGAAGAAGATCCCCTCCACACAC 130147 | |||||| | |||||| || ||||| || ||||||||||| || || || ||||| Sbjct 2850658 CTCTTCTTAAGCCAGAATATAGCACAGAAGCTTCCAGAGAAGAAAATTCCTTCAACACAA 2850599 Query 130148 GCGAACGCAAAGAGACGCTCAGCAAAGGA 130176 || ||||||| || |||||||| ||||| Sbjct 2850598 GCAAACGCAACAAGGCGCTCAGCGAAGGA 2850570 >seq15 Length=20964703 Score = 87.8 bits (96), Expect = 2e-12 Identities = 141/198 (71%), Gaps = 6/198 (3%) Strand=Plus/Minus Query 14152 AAAGCCATCCATCTCAGTCAAGAGTTGATTGATGGTTTGTTCGCGTTCATCATTCGCAGG 14211 ||| ||||||||||| ||||| | || || || |||||||| | ||||||||| || Sbjct 20643967 AAACCCATCCATCTCGGTCAATAACTGGTTAATAGTTTGTTCCCTCTCATCATTCCCA-- 20643910 Query 14212 CATACC--ACCCGCACTGCGTTGCTTACCGACGGCGTCAATTTCATCGATGAAAACGATA 14269 | | || ||| |||| | ||| | || || || ||||||||||| || ||||| || Sbjct 20643909 CCTCCCATACCTGCACCCCTTTGTCTTCCCACAGCATCAATTTCATCTATAAAAACAATG 20643850 Query 14270 CATGGTTGATTTTCAC-GGGCAACTTCAAAGATATCTCGCACTCTCTTGGCACCGACACC 14328 || || | ||| || || |||||| | ||||| || || ||||| ||||| Sbjct 20643849 CAAGG-CGCTTTCGACTTCGCCTTTTCAAACAAATCTCTAACCCTTGAAGCACCAACACC 20643791 Query 14329 CACAAACATCTCCACAAA 14346 ||||||| |||||||| Sbjct 20643790 AACAAACAATTCCACAAA 20643773 >seq7 Length=19782170 Score = 82.4 bits (90), Expect = 9e-11 Identities = 202/301 (67%), Gaps = 9/301 (3%) Strand=Plus/Minus Query 14152 AAAGCCATCCATCTCAGTCAAGAGTTGATTGATGGTTTGTTCGCGTTCATCATTC---GC 14208 ||| || |||||||||||||| || ||||| || || ||||| | ||||||||| | Sbjct 7716243 AAACCCGTCCATCTCAGTCAACAGCTGATTAATAGTCTGTTCCCTCTCATCATTCCCTCC 7716184 Query 14209 AGGCATACCACCCGCACTGCGTTGCTTACCGACGGCGTCAATTTCATCGATGAAAACGAT 14268 ||||||| || | || ||| | || || || ||||| |||||||| || || || Sbjct 7716183 CCCCATACCAGCCCCTCT---CTGCCTCCCAACCGCATCAATCTCATCGATAAACACAAT 7716127 Query 14269 ACATGGTTGATTTTCAC-GGGCAACTTCAAAGATATCTCGCACTCTCTTGGCACCGACAC 14327 || || | ||| || || || || | ||| | ||| ||| ||||| || | Sbjct 7716126 GCAAGG-CGCTTTCGACTTTGCCTTCTCGAACAAATCCCTCACCCTCGAAGCACCCACCC 7716068 Query 14328 CCACAAACATCTCCACAAAATTGGCGGCGGAACATTGGATGAAGGGGACGTTAGATTCAC 14387 | ||||||| ||||||||| | | || | ||| | ||| || ||| || || | Sbjct 7716067 CGACAAACAGCTCCACAAATTCTGAAGCTGCACAGGAAAAGAACGGCACGCCAGCCTCCC 7716008 Query 14388 CCGCGATGGCTCGGGCGAGGAGGGTCTTCCCCGTCCCTGGTTTCCCTGCGAGAAGGGCAC 14447 | || | |||| || | || |||||||| || || ||| || | |||| ||||| Sbjct 7716007 CAGCTACCGCTCTCGCCAAAAGTGTCTTCCCTGTGCCCGGTGGTCCCACCAGAA-GGCAC 7715949 Query 14448 C 14448 | Sbjct 7715948 C 7715948 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 618330274737880