Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Lupinus_20angustifolius_20[refseq_20GCF_5F001865875.1_202016-11-16]
13,573 sequences; 609,203,021 total letters
Query= NC_028092.1
Length=193301
Score E
Sequences producing significant alignments: (Bits) Value
seq2 118 1e-21
seq16 100 4e-16
seq12 95.1 1e-14
seq11 93.3 5e-14
seq15 87.8 2e-12
seq7 82.4 9e-11
>seq2
Length=24697652
Score = 118 bits (130), Expect = 1e-21
Identities = 116/150 (77%), Gaps = 0/150 (0%)
Strand=Plus/Plus
Query 130027 GTGGAGACCCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGACCTGGCATGAGACC 130086
||| | |||||| || || ||||| | || || |||||| ||||| ||||| || ||
Sbjct 21046927 GTGTAAACCCTCATCTCGCGAGATTAACTCGTTTGAGAAGGTAAGACCAGGCATAAGGCC 21046986
Query 130087 CCGCTTCTTCAACCAGAAAATCGCACAAAATGAGCCAGAGAAGAAGATCCCCTCCACACA 130146
|| ||||||||||| || |||||||| || ||||||||||| || || || |||||
Sbjct 21046987 TCGTTTCTTCAACCAAAATATCGCACAGAAGCTTCCAGAGAAGAAAATACCTTCAACACA 21047046
Query 130147 CGCGAACGCAAAGAGACGCTCAGCAAAGGA 130176
|| ||||||| |||||| ||||| |||||
Sbjct 21047047 AGCAAACGCAACGAGACGTTCAGCGAAGGA 21047076
>seq16
Length=20786881
Score = 100 bits (110), Expect = 4e-16
Identities = 229/339 (68%), Gaps = 12/339 (4%)
Strand=Plus/Plus
Query 14095 GTCAAGGATATCAATGCGGTTCGTCGCCGCGATGACAACGATGCCCGTCTCGTTATCAAA 14154
|||||| || ||| | ||| || || || || |||| || || || | |||||
Sbjct 9801843 GTCAAGAATGTCAGCTCTGTTAGTTGCTGCAATCACAATGACACCGGTATTACCCTCAAA 9801902
Query 14155 GCCATCCATCTCAGTCAAGAGTTGATTGATGGTTTGTTCGCGTTCATCATTCGC---AGG 14211
|||||||| || ||||| ||||| || | ||||||||| | |||||| ||| | |
Sbjct 9801903 CCCATCCATTTCTGTCAAAAGTTGGTTAAGGGTTTGTTCTCTTTCATCGTTCCCTCCACC 9801962
Query 14212 CATACCACCCGCACTGCGTTGCTTACCGACGGCGTCAATTTCATCGATGAAAACGATACA 14271
||| ||| | || | |||| | || || |||||||||||||| | ||||| || ||
Sbjct 9801963 CATTCCA---GTACCTCTTTGCCTTCCAACAGCGTCAATTTCATCAACAAAAACAATGCA 9802019
Query 14272 TGGTTGATTTTCACGGGCAACTTCA--AAGATATCTCGCACTCTCTTGGCACCGACACCC 14329
|| ||| || ||| |||| || | ||| || |||| ||||| |||||
Sbjct 9802020 AGGAGAATTCTCTTTGGC--CTTCTTGAATAAATCACGGACTCGAGAAGCACCAACACCA 9802077
Query 14330 ACAAACATCTCCACAAAATTGGCGGCGGAACATTG-GATGAAGGGGACGTTAGATTCACC 14388
||||||||||| ||||| | | | | | |||| || || ||||| | ||||||
Sbjct 9802078 ACAAACATCTCAACAAACTCAGAACCCG-AGATTGAGAAAAAAGGGACACCTGCTTCACC 9802136
Query 14389 CGCGATGGCTCGGGCGAGGAGGGTCTTCCCCGTCCCTGG 14427
|| || || || | || |||||||| || |||||
Sbjct 9802137 AGCAATAGCCTTCGCTAATAGCGTCTTCCCAGTTCCTGG 9802175
>seq12
Length=19065701
Score = 95.1 bits (104), Expect = 1e-14
Identities = 245/367 (67%), Gaps = 10/367 (3%)
Strand=Plus/Plus
Query 14066 TCAAAGCGACCTGGGCGGAGGAGGGCGTCGTCAAGGATATCAATGCGGTTCGTCGCCGCG 14125
||||| ||||| || | | | ||| |||||| || || | ||| || || ||
Sbjct 8127039 TCAAACCGACCCGGTCTCAATAAGGCAGAGTCAAGAATGTCGGCTCTGTTAGTTGCTGCA 8127098
Query 14126 ATGACAACGATGCCCGTCTCGTTATCAAAGCCATCCATCTCAGTCAAGAGTTGATTGATG 14185
| |||| ||| || || | ||||| |||||||| || ||||| ||||| |||| |
Sbjct 8127099 ACAACAATGATACCAGTATTACCCTCAAACCCATCCATTTCTGTCAAAAGTTGGTTGAGG 8127158
Query 14186 GTTTGTTCGCGTTCATCATTCGCAGGCATACCA--CCCGCACTGCGTTGCTTACCGACGG 14243
|| ||||| | |||||||||| | | | | | || | | | ||| | || || |
Sbjct 8127159 GTCTGTTCTCTTTCATCATTCCCT--CCTCCAATTCCGGTCCCTCTTTGTCTTCCAACAG 8127216
Query 14244 CGTCAATTTCATCGATGAAAACGATACATGGTTGATTTTCACGGGCAACTTCA--AAGAT 14301
| ||||||||||| | ||| || |||||||| ||| || ||| |||| || |
Sbjct 8127217 CATCAATTTCATCAACGAACACAATACATGGGGCATTCTCTTTGGC--CTTCTTGAACAA 8127274
Query 14302 ATCTCGCACTCTCTTGGCACCGACACCCACAAACATCTCCACAAAATTGGCGGCGGAACA 14361
||| || || | ||||| ||||| ||||||||||| ||||| | | | | | |
Sbjct 8127275 ATCACGTACCCGAGAAGCACCAACACCAACAAACATCTCAACAAACTCAGAACCTG-AGA 8127333
Query 14362 TTG-GATGAAGGGGACGTTAGATTCACCCGCGATGGCTCGGGCGAGGAGGGTCTTCCCCG 14420
||| || || || || || |||||| || || || ||| | || |||||||| |
Sbjct 8127334 TTGAGAAAAATGGAACACCAGCTTCACCAGCAATAGCCTTGGCTAACAGTGTCTTCCCTG 8127393
Query 14421 TCCCTGG 14427
| |||||
Sbjct 8127394 TTCCTGG 8127400
>seq11
Length=35963958
Score = 93.3 bits (102), Expect = 5e-14
Identities = 110/149 (74%), Gaps = 0/149 (0%)
Strand=Plus/Minus
Query 130028 TGGAGACCCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGACCTGGCATGAGACCC 130087
|| || || || || || || || | || || |||||| || || ||||| |||||
Sbjct 2850718 TGAAGCCCTTCATCTCGCGATATCAACTCGTTTGAGAAGGTAAGTCCAGGCATAAGACCT 2850659
Query 130088 CGCTTCTTCAACCAGAAAATCGCACAAAATGAGCCAGAGAAGAAGATCCCCTCCACACAC 130147
| |||||| | |||||| || ||||| || ||||||||||| || || || |||||
Sbjct 2850658 CTCTTCTTAAGCCAGAATATAGCACAGAAGCTTCCAGAGAAGAAAATTCCTTCAACACAA 2850599
Query 130148 GCGAACGCAAAGAGACGCTCAGCAAAGGA 130176
|| ||||||| || |||||||| |||||
Sbjct 2850598 GCAAACGCAACAAGGCGCTCAGCGAAGGA 2850570
>seq15
Length=20964703
Score = 87.8 bits (96), Expect = 2e-12
Identities = 141/198 (71%), Gaps = 6/198 (3%)
Strand=Plus/Minus
Query 14152 AAAGCCATCCATCTCAGTCAAGAGTTGATTGATGGTTTGTTCGCGTTCATCATTCGCAGG 14211
||| ||||||||||| ||||| | || || || |||||||| | ||||||||| ||
Sbjct 20643967 AAACCCATCCATCTCGGTCAATAACTGGTTAATAGTTTGTTCCCTCTCATCATTCCCA-- 20643910
Query 14212 CATACC--ACCCGCACTGCGTTGCTTACCGACGGCGTCAATTTCATCGATGAAAACGATA 14269
| | || ||| |||| | ||| | || || || ||||||||||| || ||||| ||
Sbjct 20643909 CCTCCCATACCTGCACCCCTTTGTCTTCCCACAGCATCAATTTCATCTATAAAAACAATG 20643850
Query 14270 CATGGTTGATTTTCAC-GGGCAACTTCAAAGATATCTCGCACTCTCTTGGCACCGACACC 14328
|| || | ||| || || |||||| | ||||| || || ||||| |||||
Sbjct 20643849 CAAGG-CGCTTTCGACTTCGCCTTTTCAAACAAATCTCTAACCCTTGAAGCACCAACACC 20643791
Query 14329 CACAAACATCTCCACAAA 14346
||||||| ||||||||
Sbjct 20643790 AACAAACAATTCCACAAA 20643773
>seq7
Length=19782170
Score = 82.4 bits (90), Expect = 9e-11
Identities = 202/301 (67%), Gaps = 9/301 (3%)
Strand=Plus/Minus
Query 14152 AAAGCCATCCATCTCAGTCAAGAGTTGATTGATGGTTTGTTCGCGTTCATCATTC---GC 14208
||| || |||||||||||||| || ||||| || || ||||| | ||||||||| |
Sbjct 7716243 AAACCCGTCCATCTCAGTCAACAGCTGATTAATAGTCTGTTCCCTCTCATCATTCCCTCC 7716184
Query 14209 AGGCATACCACCCGCACTGCGTTGCTTACCGACGGCGTCAATTTCATCGATGAAAACGAT 14268
||||||| || | || ||| | || || || ||||| |||||||| || || ||
Sbjct 7716183 CCCCATACCAGCCCCTCT---CTGCCTCCCAACCGCATCAATCTCATCGATAAACACAAT 7716127
Query 14269 ACATGGTTGATTTTCAC-GGGCAACTTCAAAGATATCTCGCACTCTCTTGGCACCGACAC 14327
|| || | ||| || || || || | ||| | ||| ||| ||||| || |
Sbjct 7716126 GCAAGG-CGCTTTCGACTTTGCCTTCTCGAACAAATCCCTCACCCTCGAAGCACCCACCC 7716068
Query 14328 CCACAAACATCTCCACAAAATTGGCGGCGGAACATTGGATGAAGGGGACGTTAGATTCAC 14387
| ||||||| ||||||||| | | || | ||| | ||| || ||| || || |
Sbjct 7716067 CGACAAACAGCTCCACAAATTCTGAAGCTGCACAGGAAAAGAACGGCACGCCAGCCTCCC 7716008
Query 14388 CCGCGATGGCTCGGGCGAGGAGGGTCTTCCCCGTCCCTGGTTTCCCTGCGAGAAGGGCAC 14447
| || | |||| || | || |||||||| || || ||| || | |||| |||||
Sbjct 7716007 CAGCTACCGCTCTCGCCAAAAGTGTCTTCCCTGTGCCCGGTGGTCCCACCAGAA-GGCAC 7715949
Query 14448 C 14448
|
Sbjct 7715948 C 7715948
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 618330274737880
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |