Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lupinus_20angustifolius_20[refseq_20GCF_5F001865875.1_202016-11-16] 13,573 sequences; 609,203,021 total letters Query= NC_028093.1 Length=182309 Score E Sequences producing significant alignments: (Bits) Value seq16 122 1e-22 seq2 118 1e-21 seq12 116 4e-21 seq15 114 2e-20 seq11 111 2e-19 seq7 96.9 4e-15 seq18 84.2 3e-11 >seq16 Length=20786881 Score = 122 bits (134), Expect = 1e-22 Identities = 233/337 (69%), Gaps = 10/337 (3%) Strand=Plus/Plus Query 9557 TCAAGGATATCAACGCGATTCGTCGCGGCGATGACAACAATACCTGTTTCATTATCAAAA 9616 ||||| || ||| | | || || || || || |||| | ||| || | | ||||| Sbjct 9801844 TCAAGAATGTCAGCTCTGTTAGTTGCTGCAATCACAATGACACCGGTATTACCCTCAAAC 9801903 Query 9617 CCATCCATCTCTGTCAAAAGTTGGTTAATAGTTTGTTCCCGTTCATCATTCGCTGGCATA 9676 |||||||| ||||||||||||||||||| |||||||| | |||||| ||| || | Sbjct 9801904 CCATCCATTTCTGTCAAAAGTTGGTTAAGGGTTTGTTCTCTTTCATCGTTCCCT--CCAC 9801961 Query 9677 CCA--CCAGCACTGCGTTGCTTTCCCACGGCATCAATCTCATCAATGAAGACGATGCATG 9734 ||| |||| || | |||| |||| || || ||||| ||||||| || || ||||| | Sbjct 9801962 CCATTCCAGTACCTCTTTGCCTTCCAACAGCGTCAATTTCATCAACAAAAACAATGCAAG 9802021 Query 9735 GTTGATTTTCGCGAGCGACTTC--AAAGAGATCCCGTACACGCTTGGCGCCCACACCAAC 9792 | ||| || || |||| || | ||| || || || || || |||||||| Sbjct 9802022 GAGAATTCTCTTTGGC--CTTCTTGAATAAATCACGGACTCGAGAAGCACCAACACCAAC 9802079 Query 9793 AAACATCTCCACAAAGTTTGCGGCGGAACATTG-GATGAAGGGGACATTAGATTCACCCG 9851 ||||||||| ||||| | | | | | |||| || || |||||| | |||||| | Sbjct 9802080 AAACATCTCAACAAACTCAGAACCCG-AGATTGAGAAAAAAGGGACACCTGCTTCACCAG 9802138 Query 9852 CAATGGCTCGGGCGAGAAGAGTCTTACCCGTACCTGG 9888 |||| || || | || ||||| || || ||||| Sbjct 9802139 CAATAGCCTTCGCTAATAGCGTCTTCCCAGTTCCTGG 9802175 >seq2 Length=24697652 Score = 118 bits (130), Expect = 1e-21 Identities = 112/143 (78%), Gaps = 0/143 (0%) Strand=Plus/Minus Query 94795 TCCTTTGCTGAGCGACTCTTCGCATTTGCGTGTGTTGAGGGTATCTTCTTCTCTGGTTCC 94854 ||||| ||||| || ||| | || ||||| |||||||| ||||| ||||||||||| | Sbjct 21047076 TCCTTCGCTGAACGTCTCGTTGCGTTTGCTTGTGTTGAAGGTATTTTCTTCTCTGGAAGC 21047017 Query 94855 TTCTGCGCTATTTATTGGCTCAAGAAGCGAGGTCTCATGCCAGGTCTCTGCTTCTCCAAC 94914 ||||| || || | |||| | ||||| ||||| || ||||| ||||| |||||| ||| Sbjct 21047016 TTCTGTGCGATATTTTGGTTGAAGAAACGAGGCCTTATGCCTGGTCTTACCTTCTCAAAC 21046957 Query 94915 GAGCTTATCTCTCGTGACGAGGG 94937 ||| | ||||| || || ||||| Sbjct 21046956 GAGTTAATCTCGCGAGATGAGGG 21046934 >seq12 Length=19065701 Score = 116 bits (128), Expect = 4e-21 Identities = 232/337 (69%), Gaps = 10/337 (3%) Strand=Plus/Plus Query 9557 TCAAGGATATCAACGCGATTCGTCGCGGCGATGACAACAATACCTGTTTCATTATCAAAA 9616 ||||| || || | | || || || || | |||| ||||| || | | ||||| Sbjct 8127069 TCAAGAATGTCGGCTCTGTTAGTTGCTGCAACAACAATGATACCAGTATTACCCTCAAAC 8127128 Query 9617 CCATCCATCTCTGTCAAAAGTTGGTTAATAGTTTGTTCCCGTTCATCATTCGCTGGCATA 9676 |||||||| ||||||||||||||||| | || ||||| | |||||||||| || | | Sbjct 8127129 CCATCCATTTCTGTCAAAAGTTGGTTGAGGGTCTGTTCTCTTTCATCATTCCCT--CCTC 8127186 Query 9677 CCA--CCAGCACTGCGTTGCTTTCCCACGGCATCAATCTCATCAATGAAGACGATGCATG 9734 | | || | | | ||| |||| || |||||||| ||||||| ||| || || |||| Sbjct 8127187 CAATTCCGGTCCCTCTTTGTCTTCCAACAGCATCAATTTCATCAACGAACACAATACATG 8127246 Query 9735 GTTGATTTTCGCGAGCGACTTC--AAAGAGATCCCGTACACGCTTGGCGCCCACACCAAC 9792 | ||| || || |||| || | ||| ||||| || || || |||||||| Sbjct 8127247 GGGCATTCTCTTTGGC--CTTCTTGAACAAATCACGTACCCGAGAAGCACCAACACCAAC 8127304 Query 9793 AAACATCTCCACAAAGTTTGCGGCGGAACATTG-GATGAAGGGGACATTAGATTCACCCG 9851 ||||||||| ||||| | | | | | |||| || || || ||| || |||||| | Sbjct 8127305 AAACATCTCAACAAACTCAGAACCTG-AGATTGAGAAAAATGGAACACCAGCTTCACCAG 8127363 Query 9852 CAATGGCTCGGGCGAGAAGAGTCTTACCCGTACCTGG 9888 |||| || ||| | || ||||| || || ||||| Sbjct 8127364 CAATAGCCTTGGCTAACAGTGTCTTCCCTGTTCCTGG 8127400 >seq15 Length=20964703 Score = 114 bits (126), Expect = 2e-20 Identities = 307/462 (66%), Gaps = 12/462 (3%) Strand=Plus/Minus Query 9526 ATCAAAGCGACCTGGACGAAGGAGCGCGTCATCAAGGATATCAACGCGATTCGTCGCGGC 9585 |||||| ||||| || | | | ||| |||||| | |||| | || ||||| || Sbjct 20644054 ATCAAATCGACCCGGCCTTAACAAGGCGGAATCAAGAACATCAGGTCTGTTGGTCGCAGC 20643995 Query 9586 GATGACAACAATACCTGTTTCATTATCAAAACCATCCATCTCTGTCAAAAGTTGGTTAAT 9645 | || | || ||| | | | | ||| ||||||||||| ||||| | |||||||| Sbjct 20643994 CAAAACTATAACACCAGAATTACCAGAAAACCCATCCATCTCGGTCAATAACTGGTTAAT 20643935 Query 9646 AGTTTGTTCCCGTTCATCATTCGCTGGCATACC--ACCAGCACTGCGTTGCTTTCCCACG 9703 ||||||||||| ||||||||| | | | || ||| |||| | ||| ||||||| Sbjct 20643934 AGTTTGTTCCCTCTCATCATTCCC--ACCTCCCATACCTGCACCCCTTTGTCTTCCCACA 20643877 Query 9704 GCATCAATCTCATCAATGAAGACGATGCATGGTTGATTTTCGCGAGCGAC--TTCAAAGA 9761 |||||||| ||||| || || || ||||| || ||||| || | |||||| | Sbjct 20643876 GCATCAATTTCATCTATAAAAACAATGCAAGG--CGCTTTCGACTTCGCCTTTTCAAACA 20643819 Query 9762 GATCCCGTACACGCTTG--GCGCCCACACCAACAAACATCTCCACAAAGTTTGCGGCGGA 9819 ||| | || || |||| || || ||||||||||||| |||||||| | | || | Sbjct 20643818 AATCTC-TA-ACCCTTGAAGCACCAACACCAACAAACAATTCCACAAATTCGGAAGCCGC 20643761 Query 9820 ACATTGGATGAAGGGGACATTAGATTCACCCGCAATGGCTCGGGCGAGAAGAGTCTTACC 9879 ||| | ||| || || |||||| || | |||| || | | || || || Sbjct 20643760 GCATGAAAAGAAAGGAGTCCCAGCTTCACCGGCTACTGCTCTTGCCAATAAGGTTTTCCC 20643701 Query 9880 CGTACCTGGCTTACCCGCGAGGAGGGCACCTCGTGGAATCTTGGCGCCACTTCCAAAGTA 9939 || || || || | ||||| ||| ||||| ||||||||| | ||| Sbjct 20643700 GGTTCCCGGTGGTCCAACTAGGAGACACCCTTTCGGAATTTTGGCGCCAAGAGCTGTGTA 20643641 Query 9940 TCTCTCAGGTTGCTTAAGAAAATCCACAATTTCTTCCAATTC 9981 | ||||| | |||||| ||||| || | ||||| ||||| Sbjct 20643640 CTTATCAGGGTTCTTAAGGAAATCAACTACTTCTTGTAATTC 20643599 >seq11 Length=35963958 Score = 111 bits (122), Expect = 2e-19 Identities = 114/149 (77%), Gaps = 0/149 (0%) Strand=Plus/Plus Query 94795 TCCTTTGCTGAGCGACTCTTCGCATTTGCGTGTGTTGAGGGTATCTTCTTCTCTGGTTCC 94854 ||||| |||||||| || | || ||||| |||||||| || || ||||||||||| | Sbjct 2850570 TCCTTCGCTGAGCGCCTTGTTGCGTTTGCTTGTGTTGAAGGAATTTTCTTCTCTGGAAGC 2850629 Query 94855 TTCTGCGCTATTTATTGGCTCAAGAAGCGAGGTCTCATGCCAGGTCTCTGCTTCTCCAAC 94914 ||||| ||||| | ||||| |||||| ||||||| ||||| || || |||||| ||| Sbjct 2850630 TTCTGTGCTATATTCTGGCTTAAGAAGAGAGGTCTTATGCCTGGACTTACCTTCTCAAAC 2850689 Query 94915 GAGCTTATCTCTCGTGACGAGGGACTCCA 94943 ||| | || || || || || || || || Sbjct 2850690 GAGTTGATATCGCGAGATGAAGGGCTTCA 2850718 >seq7 Length=19782170 Score = 96.9 bits (106), Expect = 4e-15 Identities = 236/356 (66%), Gaps = 4/356 (1%) Strand=Plus/Minus Query 9613 AAAACCATCCATCTCTGTCAAAAGTTGGTTAATAGTTTGTTCCCGTTCATCATTCGCTGG 9672 ||| || |||||||| ||||| || || |||||||| ||||||| ||||||||| || Sbjct 7716243 AAACCCGTCCATCTCAGTCAACAGCTGATTAATAGTCTGTTCCCTCTCATCATTCCCTCC 7716184 Query 9673 CATACCACCAGCACTGCGTTGCTTTCCCACGGCATCAATCTCATCAATGAAGACGATGCA 9732 | |||||| | | ||| | || || |||||||||||||| || || || ||||| Sbjct 7716183 CCCCATACCAGCCCCTCTCTGCCTCCCAACCGCATCAATCTCATCGATAAACACAATGCA 7716124 Query 9733 TGGTTGATTTTCGCGAGCGACT--TCAAAGAGATCCCGTACACGCTTGGCGCCCACACCA 9790 || ||||| | || || || | ||||| || | | || ||||| || Sbjct 7716123 AGG--CGCTTTCGACTTTGCCTTCTCGAACAAATCCCTCACCCTCGAAGCACCCACCCCG 7716066 Query 9791 ACAAACATCTCCACAAAGTTTGCGGCGGAACATTGGATGAAGGGGACATTAGATTCACCC 9850 ||||||| ||||||||| | || || | ||| | ||| || || || || || Sbjct 7716065 ACAAACAGCTCCACAAATTCTGAAGCTGCACAGGAAAAGAACGGCACGCCAGCCTCCCCA 7716006 Query 9851 GCAATGGCTCGGGCGAGAAGAGTCTTACCCGTACCTGGCTTACCCGCGAGGAGGGCACCT 9910 || | |||| || | ||| ||||| || || || || ||| | || ||| ||| Sbjct 7716005 GCTACCGCTCTCGCCAAAAGTGTCTTCCCTGTGCCCGGTGGTCCCACCAGAAGGCACCCT 7715946 Query 9911 CGTGGAATCTTGGCGCCACTTCCAAAGTATCTCTCAGGTTGCTTAAGAAAATCCAC 9966 |||||||| || || || || | ||||| | ||| |||||||| || Sbjct 7715945 TTCGGAATCTTAGCACCCAAGGCAGTATACTTATCAGGATTCTTCAGAAAATCAAC 7715890 >seq18 Length=16588007 Score = 84.2 bits (92), Expect = 3e-11 Identities = 94/126 (75%), Gaps = 0/126 (0%) Strand=Plus/Minus Query 7505 TTGGGTAACATAAACGCGGCGAGAGATTGGGGTCACGCGAAGGACTATGTTGAAGCTATG 7564 ||||| ||| | | || | || ||||||||| ||| ||| ||||||||||||||| Sbjct 15825528 TTGGGGAACCTTCAGGCTTCAAGGGATTGGGGTTTCGCTGGGGATTATGTTGAAGCTATG 15825469 Query 7565 TGGCTCATGCTTCAACAAGAGGAAGCCGACGAATATGTAGTAGCAACGGGTGAGACCCAT 7624 ||| | ||||| || ||||| |||| || || ||||| || ||||| | ||| | || Sbjct 15825468 TGGTTGATGCTGCAGCAAGAAAAAGCTGATGATTATGTTGTTGCAACAGAGGAGTCACAC 15825409 Query 7625 ACAGTG 7630 |||||| Sbjct 15825408 ACAGTG 15825403 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 583161842514520