Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Lupinus_20angustifolius_20[refseq_20GCF_5F001865875.1_202016-11-16]
13,573 sequences; 609,203,021 total letters
Query= NC_028093.1
Length=182309
Score E
Sequences producing significant alignments: (Bits) Value
seq16 122 1e-22
seq2 118 1e-21
seq12 116 4e-21
seq15 114 2e-20
seq11 111 2e-19
seq7 96.9 4e-15
seq18 84.2 3e-11
>seq16
Length=20786881
Score = 122 bits (134), Expect = 1e-22
Identities = 233/337 (69%), Gaps = 10/337 (3%)
Strand=Plus/Plus
Query 9557 TCAAGGATATCAACGCGATTCGTCGCGGCGATGACAACAATACCTGTTTCATTATCAAAA 9616
||||| || ||| | | || || || || || |||| | ||| || | | |||||
Sbjct 9801844 TCAAGAATGTCAGCTCTGTTAGTTGCTGCAATCACAATGACACCGGTATTACCCTCAAAC 9801903
Query 9617 CCATCCATCTCTGTCAAAAGTTGGTTAATAGTTTGTTCCCGTTCATCATTCGCTGGCATA 9676
|||||||| ||||||||||||||||||| |||||||| | |||||| ||| || |
Sbjct 9801904 CCATCCATTTCTGTCAAAAGTTGGTTAAGGGTTTGTTCTCTTTCATCGTTCCCT--CCAC 9801961
Query 9677 CCA--CCAGCACTGCGTTGCTTTCCCACGGCATCAATCTCATCAATGAAGACGATGCATG 9734
||| |||| || | |||| |||| || || ||||| ||||||| || || ||||| |
Sbjct 9801962 CCATTCCAGTACCTCTTTGCCTTCCAACAGCGTCAATTTCATCAACAAAAACAATGCAAG 9802021
Query 9735 GTTGATTTTCGCGAGCGACTTC--AAAGAGATCCCGTACACGCTTGGCGCCCACACCAAC 9792
| ||| || || |||| || | ||| || || || || || ||||||||
Sbjct 9802022 GAGAATTCTCTTTGGC--CTTCTTGAATAAATCACGGACTCGAGAAGCACCAACACCAAC 9802079
Query 9793 AAACATCTCCACAAAGTTTGCGGCGGAACATTG-GATGAAGGGGACATTAGATTCACCCG 9851
||||||||| ||||| | | | | | |||| || || |||||| | |||||| |
Sbjct 9802080 AAACATCTCAACAAACTCAGAACCCG-AGATTGAGAAAAAAGGGACACCTGCTTCACCAG 9802138
Query 9852 CAATGGCTCGGGCGAGAAGAGTCTTACCCGTACCTGG 9888
|||| || || | || ||||| || || |||||
Sbjct 9802139 CAATAGCCTTCGCTAATAGCGTCTTCCCAGTTCCTGG 9802175
>seq2
Length=24697652
Score = 118 bits (130), Expect = 1e-21
Identities = 112/143 (78%), Gaps = 0/143 (0%)
Strand=Plus/Minus
Query 94795 TCCTTTGCTGAGCGACTCTTCGCATTTGCGTGTGTTGAGGGTATCTTCTTCTCTGGTTCC 94854
||||| ||||| || ||| | || ||||| |||||||| ||||| ||||||||||| |
Sbjct 21047076 TCCTTCGCTGAACGTCTCGTTGCGTTTGCTTGTGTTGAAGGTATTTTCTTCTCTGGAAGC 21047017
Query 94855 TTCTGCGCTATTTATTGGCTCAAGAAGCGAGGTCTCATGCCAGGTCTCTGCTTCTCCAAC 94914
||||| || || | |||| | ||||| ||||| || ||||| ||||| |||||| |||
Sbjct 21047016 TTCTGTGCGATATTTTGGTTGAAGAAACGAGGCCTTATGCCTGGTCTTACCTTCTCAAAC 21046957
Query 94915 GAGCTTATCTCTCGTGACGAGGG 94937
||| | ||||| || || |||||
Sbjct 21046956 GAGTTAATCTCGCGAGATGAGGG 21046934
>seq12
Length=19065701
Score = 116 bits (128), Expect = 4e-21
Identities = 232/337 (69%), Gaps = 10/337 (3%)
Strand=Plus/Plus
Query 9557 TCAAGGATATCAACGCGATTCGTCGCGGCGATGACAACAATACCTGTTTCATTATCAAAA 9616
||||| || || | | || || || || | |||| ||||| || | | |||||
Sbjct 8127069 TCAAGAATGTCGGCTCTGTTAGTTGCTGCAACAACAATGATACCAGTATTACCCTCAAAC 8127128
Query 9617 CCATCCATCTCTGTCAAAAGTTGGTTAATAGTTTGTTCCCGTTCATCATTCGCTGGCATA 9676
|||||||| ||||||||||||||||| | || ||||| | |||||||||| || | |
Sbjct 8127129 CCATCCATTTCTGTCAAAAGTTGGTTGAGGGTCTGTTCTCTTTCATCATTCCCT--CCTC 8127186
Query 9677 CCA--CCAGCACTGCGTTGCTTTCCCACGGCATCAATCTCATCAATGAAGACGATGCATG 9734
| | || | | | ||| |||| || |||||||| ||||||| ||| || || ||||
Sbjct 8127187 CAATTCCGGTCCCTCTTTGTCTTCCAACAGCATCAATTTCATCAACGAACACAATACATG 8127246
Query 9735 GTTGATTTTCGCGAGCGACTTC--AAAGAGATCCCGTACACGCTTGGCGCCCACACCAAC 9792
| ||| || || |||| || | ||| ||||| || || || ||||||||
Sbjct 8127247 GGGCATTCTCTTTGGC--CTTCTTGAACAAATCACGTACCCGAGAAGCACCAACACCAAC 8127304
Query 9793 AAACATCTCCACAAAGTTTGCGGCGGAACATTG-GATGAAGGGGACATTAGATTCACCCG 9851
||||||||| ||||| | | | | | |||| || || || ||| || |||||| |
Sbjct 8127305 AAACATCTCAACAAACTCAGAACCTG-AGATTGAGAAAAATGGAACACCAGCTTCACCAG 8127363
Query 9852 CAATGGCTCGGGCGAGAAGAGTCTTACCCGTACCTGG 9888
|||| || ||| | || ||||| || || |||||
Sbjct 8127364 CAATAGCCTTGGCTAACAGTGTCTTCCCTGTTCCTGG 8127400
>seq15
Length=20964703
Score = 114 bits (126), Expect = 2e-20
Identities = 307/462 (66%), Gaps = 12/462 (3%)
Strand=Plus/Minus
Query 9526 ATCAAAGCGACCTGGACGAAGGAGCGCGTCATCAAGGATATCAACGCGATTCGTCGCGGC 9585
|||||| ||||| || | | | ||| |||||| | |||| | || ||||| ||
Sbjct 20644054 ATCAAATCGACCCGGCCTTAACAAGGCGGAATCAAGAACATCAGGTCTGTTGGTCGCAGC 20643995
Query 9586 GATGACAACAATACCTGTTTCATTATCAAAACCATCCATCTCTGTCAAAAGTTGGTTAAT 9645
| || | || ||| | | | | ||| ||||||||||| ||||| | ||||||||
Sbjct 20643994 CAAAACTATAACACCAGAATTACCAGAAAACCCATCCATCTCGGTCAATAACTGGTTAAT 20643935
Query 9646 AGTTTGTTCCCGTTCATCATTCGCTGGCATACC--ACCAGCACTGCGTTGCTTTCCCACG 9703
||||||||||| ||||||||| | | | || ||| |||| | ||| |||||||
Sbjct 20643934 AGTTTGTTCCCTCTCATCATTCCC--ACCTCCCATACCTGCACCCCTTTGTCTTCCCACA 20643877
Query 9704 GCATCAATCTCATCAATGAAGACGATGCATGGTTGATTTTCGCGAGCGAC--TTCAAAGA 9761
|||||||| ||||| || || || ||||| || ||||| || | |||||| |
Sbjct 20643876 GCATCAATTTCATCTATAAAAACAATGCAAGG--CGCTTTCGACTTCGCCTTTTCAAACA 20643819
Query 9762 GATCCCGTACACGCTTG--GCGCCCACACCAACAAACATCTCCACAAAGTTTGCGGCGGA 9819
||| | || || |||| || || ||||||||||||| |||||||| | | || |
Sbjct 20643818 AATCTC-TA-ACCCTTGAAGCACCAACACCAACAAACAATTCCACAAATTCGGAAGCCGC 20643761
Query 9820 ACATTGGATGAAGGGGACATTAGATTCACCCGCAATGGCTCGGGCGAGAAGAGTCTTACC 9879
||| | ||| || || |||||| || | |||| || | | || || ||
Sbjct 20643760 GCATGAAAAGAAAGGAGTCCCAGCTTCACCGGCTACTGCTCTTGCCAATAAGGTTTTCCC 20643701
Query 9880 CGTACCTGGCTTACCCGCGAGGAGGGCACCTCGTGGAATCTTGGCGCCACTTCCAAAGTA 9939
|| || || || | ||||| ||| ||||| ||||||||| | |||
Sbjct 20643700 GGTTCCCGGTGGTCCAACTAGGAGACACCCTTTCGGAATTTTGGCGCCAAGAGCTGTGTA 20643641
Query 9940 TCTCTCAGGTTGCTTAAGAAAATCCACAATTTCTTCCAATTC 9981
| ||||| | |||||| ||||| || | ||||| |||||
Sbjct 20643640 CTTATCAGGGTTCTTAAGGAAATCAACTACTTCTTGTAATTC 20643599
>seq11
Length=35963958
Score = 111 bits (122), Expect = 2e-19
Identities = 114/149 (77%), Gaps = 0/149 (0%)
Strand=Plus/Plus
Query 94795 TCCTTTGCTGAGCGACTCTTCGCATTTGCGTGTGTTGAGGGTATCTTCTTCTCTGGTTCC 94854
||||| |||||||| || | || ||||| |||||||| || || ||||||||||| |
Sbjct 2850570 TCCTTCGCTGAGCGCCTTGTTGCGTTTGCTTGTGTTGAAGGAATTTTCTTCTCTGGAAGC 2850629
Query 94855 TTCTGCGCTATTTATTGGCTCAAGAAGCGAGGTCTCATGCCAGGTCTCTGCTTCTCCAAC 94914
||||| ||||| | ||||| |||||| ||||||| ||||| || || |||||| |||
Sbjct 2850630 TTCTGTGCTATATTCTGGCTTAAGAAGAGAGGTCTTATGCCTGGACTTACCTTCTCAAAC 2850689
Query 94915 GAGCTTATCTCTCGTGACGAGGGACTCCA 94943
||| | || || || || || || || ||
Sbjct 2850690 GAGTTGATATCGCGAGATGAAGGGCTTCA 2850718
>seq7
Length=19782170
Score = 96.9 bits (106), Expect = 4e-15
Identities = 236/356 (66%), Gaps = 4/356 (1%)
Strand=Plus/Minus
Query 9613 AAAACCATCCATCTCTGTCAAAAGTTGGTTAATAGTTTGTTCCCGTTCATCATTCGCTGG 9672
||| || |||||||| ||||| || || |||||||| ||||||| ||||||||| ||
Sbjct 7716243 AAACCCGTCCATCTCAGTCAACAGCTGATTAATAGTCTGTTCCCTCTCATCATTCCCTCC 7716184
Query 9673 CATACCACCAGCACTGCGTTGCTTTCCCACGGCATCAATCTCATCAATGAAGACGATGCA 9732
| |||||| | | ||| | || || |||||||||||||| || || || |||||
Sbjct 7716183 CCCCATACCAGCCCCTCTCTGCCTCCCAACCGCATCAATCTCATCGATAAACACAATGCA 7716124
Query 9733 TGGTTGATTTTCGCGAGCGACT--TCAAAGAGATCCCGTACACGCTTGGCGCCCACACCA 9790
|| ||||| | || || || | ||||| || | | || ||||| ||
Sbjct 7716123 AGG--CGCTTTCGACTTTGCCTTCTCGAACAAATCCCTCACCCTCGAAGCACCCACCCCG 7716066
Query 9791 ACAAACATCTCCACAAAGTTTGCGGCGGAACATTGGATGAAGGGGACATTAGATTCACCC 9850
||||||| ||||||||| | || || | ||| | ||| || || || || ||
Sbjct 7716065 ACAAACAGCTCCACAAATTCTGAAGCTGCACAGGAAAAGAACGGCACGCCAGCCTCCCCA 7716006
Query 9851 GCAATGGCTCGGGCGAGAAGAGTCTTACCCGTACCTGGCTTACCCGCGAGGAGGGCACCT 9910
|| | |||| || | ||| ||||| || || || || ||| | || ||| |||
Sbjct 7716005 GCTACCGCTCTCGCCAAAAGTGTCTTCCCTGTGCCCGGTGGTCCCACCAGAAGGCACCCT 7715946
Query 9911 CGTGGAATCTTGGCGCCACTTCCAAAGTATCTCTCAGGTTGCTTAAGAAAATCCAC 9966
|||||||| || || || || | ||||| | ||| |||||||| ||
Sbjct 7715945 TTCGGAATCTTAGCACCCAAGGCAGTATACTTATCAGGATTCTTCAGAAAATCAAC 7715890
>seq18
Length=16588007
Score = 84.2 bits (92), Expect = 3e-11
Identities = 94/126 (75%), Gaps = 0/126 (0%)
Strand=Plus/Minus
Query 7505 TTGGGTAACATAAACGCGGCGAGAGATTGGGGTCACGCGAAGGACTATGTTGAAGCTATG 7564
||||| ||| | | || | || ||||||||| ||| ||| |||||||||||||||
Sbjct 15825528 TTGGGGAACCTTCAGGCTTCAAGGGATTGGGGTTTCGCTGGGGATTATGTTGAAGCTATG 15825469
Query 7565 TGGCTCATGCTTCAACAAGAGGAAGCCGACGAATATGTAGTAGCAACGGGTGAGACCCAT 7624
||| | ||||| || ||||| |||| || || ||||| || ||||| | ||| | ||
Sbjct 15825468 TGGTTGATGCTGCAGCAAGAAAAAGCTGATGATTATGTTGTTGCAACAGAGGAGTCACAC 15825409
Query 7625 ACAGTG 7630
||||||
Sbjct 15825408 ACAGTG 15825403
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 583161842514520
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |