Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Lupinus_20angustifolius_20[refseq_20GCF_5F001865875.1_202016-11-16]
13,573 sequences; 609,203,021 total letters
Query= NC_028108.1
Length=171454
Score E
Sequences producing significant alignments: (Bits) Value
seq2 105 7e-18
seq11 98.7 1e-15
seq1 87.8 2e-12
>seq2
Length=24697652
Score = 105 bits (116), Expect = 7e-18
Identities = 348/529 (66%), Gaps = 18/529 (3%)
Strand=Plus/Minus
Query 59593 TGTATAAGAAAGCGATCGGTTCATTCTGGTCCGTCGAGGAGATTGACCTCGCCGGAGACC 59652
|||| || ||||| | |||||||||| ||| ||| || | || ||| | ||| |
Sbjct 21047453 TGTACAAAAAAGCAGAAGCTTCATTCTGGACCGCCGAAGAAGTCGATCTCTCTCAAGATC 21047394
Query 59653 TGAAGGATTGGGACAAGCTCAATTACGACGAGCAGCATTTCATCAAGATGGTCCTGGCCT 59712
| | |||||| |||| ||| ||| | || |||||||| |||| || |
Sbjct 21047393 TCCGCCACTGGGACTCCCTCACCGACGGCGAACGCCACTTCATCAAACACATCCTCGCTT 21047334
Query 59713 TCTTCGCGGCGAGTGATGGAATTGTGATGGAAAATATAGACATGAACTTTTCCAAG---G 59769
||||||| || || ||||| || | ||||| | | | ||| || || | |
Sbjct 21047333 TCTTCGCCGCTTCCGACGGAATCGTCCTTGAAAACCTCGCCG-GAAGGTT--CATGACAG 21047277
Query 59770 ATGTCCAGATTGCCGAGGCCCGGTCGTTCTACGCGTATCAG-TCGTTCAA-CGAGTCTAT 59827
| | || | || ||||| || | ||||||| | ||| ||| ||| |||| |||
Sbjct 21047276 AGATACAAGTCGCTGAGGCGCGTGCATTCTACGGCTTCCAGATCG--CAATCGAGAATAT 21047219
Query 59828 CCACTCCGAGACGTACTCGCTCATGATCGATAAGTTGGTCAAGGATCCGGAAGAGAAGGC 59887
||| || |||| ||| ||| | | || | || |||| ||| | | || ||
Sbjct 21047218 CCATTCTGAGATGTATAGTCTCCTTCTTGAAACGTATATCAAAGATTCCGCTGATAAAAA 21047159
Query 59888 TGGTCTGTTCCGTGCCATAGAGACG-TCCCCCGCAGTTAAACAAAAAGCAGAATGGGCCA 59946
| | | |||| || ||||||||| | || || ||| ||||||| || |||||
Sbjct 21047158 TCGATTATTCCACGCAATAGAGACGATACCTTGC-GTTGCTAAAAAAGCTGAGTGGGCGC 21047100
Query 59947 TGCAGTGGAT-GA--GTCCTGGAGCATCATTTGCACAACGTCTCATAGCTTTTGCATGCG 60003
| | ||||| || || | || ||| || || |||||||| | || ||||| || |
Sbjct 21047099 TTCGTTGGATCGACGGTTC---AGAATCCTTCGCTGAACGTCTCGTTGCGTTTGCTTGTG 21047043
Query 60004 TGGAAGGAATCTTCTTCTCTGGCTCGTTCTGTGCTATTTTCTGGCTCAAAAAGCGTGGCC 60063
| ||||| || ||||||||||| |||||||| || || ||| | || || || ||||
Sbjct 21047042 TTGAAGGTATTTTCTTCTCTGGAAGCTTCTGTGCGATATTTTGGTTGAAGAAACGAGGCC 21046983
Query 60064 TCATGCCGGGCCTGAGTTTCTCCAACGAGCTGATTTCCCGGGACGAGGG 60112
| ||||| || || | ||||| |||||| | || || || || |||||
Sbjct 21046982 TTATGCCTGGTCTTACCTTCTCAAACGAGTTAATCTCGCGAGATGAGGG 21046934
>seq11
Length=35963958
Score = 98.7 bits (108), Expect = 1e-15
Identities = 99/129 (77%), Gaps = 0/129 (0%)
Strand=Plus/Plus
Query 59991 GCTTTTGCATGCGTGGAAGGAATCTTCTTCTCTGGCTCGTTCTGTGCTATTTTCTGGCTC 60050
|| ||||| || || |||||||| ||||||||||| ||||||||||| ||||||||
Sbjct 2850591 GCGTTTGCTTGTGTTGAAGGAATTTTCTTCTCTGGAAGCTTCTGTGCTATATTCTGGCTT 2850650
Query 60051 AAAAAGCGTGGCCTCATGCCGGGCCTGAGTTTCTCCAACGAGCTGATTTCCCGGGACGAG 60110
|| ||| | || || ||||| || || | ||||| |||||| |||| || || || ||
Sbjct 2850651 AAGAAGAGAGGTCTTATGCCTGGACTTACCTTCTCAAACGAGTTGATATCGCGAGATGAA 2850710
Query 60111 GGCCTCCAT 60119
|| || |||
Sbjct 2850711 GGGCTTCAT 2850719
>seq1
Length=36457581
Score = 87.8 bits (96), Expect = 2e-12
Identities = 92/121 (76%), Gaps = 0/121 (0%)
Strand=Plus/Plus
Query 79057 GATGCCAGGTTGCACACGGCCGTCTCGTCCGGGCTAGAAACCTCGATGATTTCTGTGCAC 79116
||||||||||||||||| ||||| || ||| || | | ||| || || || ||||||
Sbjct 33688210 GATGCCAGGTTGCACACAGCCGTTTCTGTCGGACTTGTATACTCAATTATCTCAGTGCAC 33688269
Query 79117 AAATTAGACGACTTGATGGTGCCGATGTTCTTCTGGTTGCTCTTCTCGTTACAGGCGTCC 79176
|| || || ||||| || ||||| | |||| ||||||||| ||| ||| || | ||||
Sbjct 33688270 AAGTTTGATGACTTAATTGTGCCAAGATTCTGCTGGTTGCTTTTCCTGTTGCAAGAGTCC 33688329
Query 79177 T 79177
|
Sbjct 33688330 T 33688330
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 548431735911120
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |