Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lupinus_20angustifolius_20[refseq_20GCF_5F001865875.1_202016-11-16] 13,573 sequences; 609,203,021 total letters Query= NC_028110.1 Length=171045 Score E Sequences producing significant alignments: (Bits) Value seq2 145 8e-30 seq11 134 2e-26 seq9 102 9e-17 seq18 89.7 6e-13 seq15 89.7 6e-13 seq13 89.7 6e-13 seq12 89.7 6e-13 seq6 89.7 6e-13 seq4 87.8 2e-12 seq20 86.0 7e-12 seq19 86.0 7e-12 seq17 86.0 7e-12 seq16 86.0 7e-12 seq7 86.0 7e-12 seq1 86.0 7e-12 >seq2 Length=24697652 Score = 145 bits (160), Expect = 8e-30 Identities = 308/446 (69%), Gaps = 18/446 (4%) Strand=Plus/Plus Query 74784 ATCAATTCATTCGAAAACGAAAGGCCAGGCATAAGTCCACGCTTCTTCAACCAAAAGATG 74843 || || || || || || | ||| ||||||||||| || || |||||||||||||| || Sbjct 21046949 ATTAACTCGTTTGAGAAGGTAAGACCAGGCATAAGGCCTCGTTTCTTCAACCAAAATATC 21047008 Query 74844 GCACAGAAGGAACCACTGAAGAAGATGCCTTCGACACACGCAAAGGCGACAAGGCGTTGC 74903 ||||||||| ||| |||||| || ||||| ||||| ||||| || || || |||| Sbjct 21047009 GCACAGAAGCTTCCAGAGAAGAAAATACCTTCAACACAAGCAAACGCAACGAGACGTTCA 21047068 Query 74904 GCGAACGGTGCATCGGAA--GTC-ATCCAAGTCTGAGCCCATTCAGCTTTTCGTTTG-AC 74959 ||||| | | || ||| ||| |||||| | ||||| ||||||||| || | | Sbjct 21047069 GCGAAGGAT---TCTGAACCGTCGATCCAACGAAGCGCCCACTCAGCTTTT--TTAGCAA 21047123 Query 74960 CGC-AGGGACAGTATCGATCGCTTGGAAGAGGCTTGCCTTCTCTTCGGGATCCTTGACGA 75018 ||| ||| | || || || || ||||| | | || || ||| ||| |||| Sbjct 21047124 CGCAAGGTATCGTCTCTATTGCGTGGAATAATCGATTTTTATCAGCGGAATCTTTGATAT 21047183 Query 75019 GCTTGTCAATCATAAGTGAGTACGTCTCCGAATGAATCGACTCG-TTGAACGA-CTGGTA 75076 | | |||| | || ||| |||| ||||| || |||| ||| ||| |||| | Sbjct 21047184 ACGTTTCAAGAAGGAGACTATACATCTCAGAATGGATATTCTCGATTG--CGATCTGGAA 21047241 Query 75077 CGCGTAGAAAGACCGCGCCTCTGCAATCTGTACATCCTT--TGAAAAATTCATGTCGATA 75134 ||||||| | |||||||| || | |||| || | || || ||| | ||| Sbjct 21047242 GCCGTAGAATGCACGCGCCTCAGCGACTTGTATCTCTGTCATG-AACCTTC-CGGCGAGG 21047299 Query 75135 TTCTCCATGACGATGCCGTCCGAGGCGGCGAAAAAAGCCAGTACCATTTTGATAAAGTGG 75194 || || | |||||| ||||| || |||||||| ||||| || | |||||| |||||| Sbjct 21047300 TTTTCAAGGACGATTCCGTCGGAAGCGGCGAAGAAAGCGAGGATGTGTTTGATGAAGTGG 21047359 Query 75195 CGCTCATCGTCAGTGAGTTTGTCCCA 75220 || || |||| ||||| |||||| Sbjct 21047360 CGTTCGCCGTCGGTGAGGGAGTCCCA 21047385 Score = 86.0 bits (94), Expect = 7e-12 Identities = 64/74 (86%), Gaps = 1/74 (1%) Strand=Plus/Plus Query 79625 TGCTTTCGATGAGCTTTGATCTCATTACCTCCCGCTTACTAAACGGGTGCTCT-ACCAAT 79683 ||||||| |||| |||| |||| ||||||||||||||||||||||||||| ||||| Sbjct 2292319 TGCTTTCATTGAGAGTTGAACTCAAGACCTCCCGCTTACTAAACGGGTGCTCTAACCAAC 2292378 Query 79684 TGAGCTACGAAAGC 79697 ||||||| |||||| Sbjct 2292379 TGAGCTATGAAAGC 2292392 Score = 86.0 bits (94), Expect = 7e-12 Identities = 64/74 (86%), Gaps = 1/74 (1%) Strand=Plus/Plus Query 79625 TGCTTTCGATGAGCTTTGATCTCATTACCTCCCGCTTACTAAACGGGTGCTCT-ACCAAT 79683 |||| ||| |||| |||| |||| ||||||||||||||||||||||||||| ||||| Sbjct 3306098 TGCTCTCGTTGAGAGTTGAACTCAAGACCTCCCGCTTACTAAACGGGTGCTCTAACCAAC 3306157 Query 79684 TGAGCTACGAAAGC 79697 |||||||||| ||| Sbjct 3306158 TGAGCTACGAGAGC 3306171 >seq11 Length=35963958 Score = 134 bits (148), Expect = 2e-26 Identities = 337/505 (67%), Gaps = 14/505 (3%) Strand=Plus/Minus Query 74769 CCTTCATCTCTGCTTATCAATTCATTCGAAAACGAAAGGCCAGGCATAAGTCCACGCTTC 74828 |||||||||| |||||| || || || || | ||| ||||||||||| || | |||| Sbjct 2850712 CCTTCATCTCGCGATATCAACTCGTTTGAGAAGGTAAGTCCAGGCATAAGACCTCTCTTC 2850653 Query 74829 TTCAACCAAAAGATGGCACAGAAGGAACCACTGAAGAAGATGCCTTCGACACACGCAAAG 74888 || | ||| || || ||||||||| ||| |||||| || ||||| ||||| ||||| Sbjct 2850652 TTAAGCCAGAATATAGCACAGAAGCTTCCAGAGAAGAAAATTCCTTCAACACAAGCAAAC 2850593 Query 74889 GCGACAAGGCGTTGCGCGAACGGTGCATCGGAA--GTC-ATCCAAGTCTGAGCCCATTCA 74945 || |||||||| | ||||| | | || ||| || |||||| ||||| ||| Sbjct 2850592 GCAACAAGGCGCTCAGCGAAGGAT---TCTGAACCATCGATCCAACGTAACGCCCACTCA 2850536 Query 74946 GCTTTTCGTTTGACCGCAGGGACAGTATCGATCGCTTGGAAGA---GGCTTGCCTTCTCT 75002 ||||| | || ||||| || || | ||| ||||| | || || || || Sbjct 2850535 GCTTTCCTCGCAACACAAGGGATTGTTTCAACCGCGTGGAACAAACGGTTT---TTATCA 2850479 Query 75003 TCGGGATCCTTGACGAGCTTGTCAATCATAAGTGAGTACGTCTCCGAATGAATCGACTCG 75062 | | |||||||| | |||| | || |||| |||| ||||| || || Sbjct 2850478 GCCGAATCCTTGATATATGTTTCAAGAAGGAGACTGTACATCTCAGAATGGATATTTTCA 2850419 Query 75063 TTGAACGA-CTGGTACGCGTAGAAAGACCGCGCCTCTGCAATCTGTACATCCTTTGAAAA 75121 | | | | ||| | ||||||||| |||||||| || | || | || | ||| Sbjct 2850418 AT-AGCAATTTGGAATCCGTAGAAAGCACGCGCCTCAGCGACTTGGATTTCAGTCATAAA 2850360 Query 75122 ATTCATGTCGATATTCTCCATGACGATGCCGTCCGAGGCGGCGAAAAAAGCCAGTACCAT 75181 | | | | || || | ||||| ||||| ||||||||||| ||||| || || Sbjct 2850359 CCTTCCGGCAAGGTTTTCAAGAACGATACCGTCAGAGGCGGCGAAGAAAGCGAGGACGTG 2850300 Query 75182 TTTGATAAAGTGGCGCTCATCGTCAGTGAGTTTGTCCCAATCCTTCAGGTCCCCCGCCAA 75241 ||||| ||||||||| || |||| ||||| || ||||| | | |||| | | Sbjct 2850299 TTTGACAAAGTGGCGTTCGCCGTCGGTGAGGTTCTCCCAGTGGCGGACGTCCTGAGAAAG 2850240 Query 75242 ATCAATCTCCTCGACCGTCCAGAAA 75266 ||||| |||||| | ||||||||| Sbjct 2850239 ATCAACTTCCTCGGCGGTCCAGAAA 2850215 >seq9 Length=21753712 Score = 102 bits (112), Expect = 9e-17 Identities = 310/469 (66%), Gaps = 30/469 (6%) Strand=Plus/Plus Query 74769 CCTTCATCTCTGCTTATCAATTCATTCGAAAACGAAAGGCCAGGCATAAGTCCACGCTTC 74828 |||||||||| |||||| || ||||| || | ||| || ||||| | || || || Sbjct 19303941 CCTTCATCTCGCGATATCAACTCGTTCGAGAATGTAAGACCGGGCATTAACCCGCGTTTT 19304000 Query 74829 TTCAACCAAAAGATGGCACAGAAGGAACCACTGAAGAAGATGCCTTCGACACACGCAAAG 74888 || | |||||| || ||||||||| ||| ||| || || ||||| || || ||||| Sbjct 19304001 TTAAGCCAAAATATCGCACAGAAGCTTCCAGAGAAAAATATTCCTTCAACGCAAGCAAAA 19304060 Query 74889 GCGACAAGGCGTTGCGCGAACGGTGCATCGGAA--GTC-ATCCAAGTCTGA--GCCCATT 74943 || || ||||||| ||||| | | || ||| ||| ||||| || | ||||||| Sbjct 19304061 GCAACGAGGCGTTCTGCGAAGGAT---TCTGAACCGTCGATCCA--TCGTAACGCCCATT 19304115 Query 74944 CAGCTTTTCGTTTGACCGCAGGGACAGTATCGATCGCTTGGAAGA---GGCTTGCCTTCT 75000 ||||||| | | || ||| | || || ||||| ||||| | || || || | Sbjct 19304116 CAGCTTTCTTTGTAACACAAGGAATGGTTTCAATCGCGTGGAATAATCGGTTT---TTAT 19304172 Query 75001 CTTCGGGATCCTTGACGAGCTTGTCAATCATAAGTGAGTACGTCTCCGAATGAATCGACT 75060 | ||| || |||| | || | | || ||| |||| || || || | Sbjct 19304173 CAGCGGAGTCTTTGATATATGTTTCGAGAAGGAGGCTATACATCTCAGAGTGGATATTTT 19304232 Query 75061 CGTTGAACGA-CTGGTACGCGTAGAAAGACCGCGCCTCTGCAATCTGTACATCCTTTGA- 75118 | || ||| ||| | ||||||||| |||||||| || | || | ||||| Sbjct 19304233 CAATG-GCGATTTGGAAGCCGTAGAAAGCACGCGCCTCAGCGACTTGAA-----TTTGAG 19304286 Query 75119 -----AAAATTCATGTCGATATTCTCCATGACGATGCCGTCCGAGGCGGCGAAAAAAGCC 75173 || ||| | ||| || || | ||||| ||||| ||||||||||| || || Sbjct 19304287 TCATGAACCTTC-CGGCGAGGTTTTCAAGAACGATTCCGTCGGAGGCGGCGAAGAAGGCG 19304345 Query 75174 AGTACCATTTTGATAAAGTGGCGCTCATCGTCAGTGAGTTTGTCCCAAT 75222 || | |||||| |||||||| |||||||| ||||| ||||||| Sbjct 19304346 AGGATGTGTTTGATGAAGTGGCGTTCATCGTCGGTGAGAGAATCCCAAT 19304394 >seq18 Length=16588007 Score = 89.7 bits (98), Expect = 6e-13 Identities = 66/76 (87%), Gaps = 1/76 (1%) Strand=Plus/Minus Query 79625 TGCTTTCGATGAGCTTTGATCTCATTACCTCCCGCTTACTAAACGGGTGCTCT-ACCAAT 79683 ||||||| |||| |||| |||| ||||||||||||||||||||||||||| ||||| Sbjct 10974827 TGCTTTCATTGAGAGTTGAACTCAAGACCTCCCGCTTACTAAACGGGTGCTCTAACCAAC 10974768 Query 79684 TGAGCTACGAAAGCAA 79699 ||||||| |||||||| Sbjct 10974767 TGAGCTATGAAAGCAA 10974752 Score = 86.0 bits (94), Expect = 7e-12 Identities = 64/74 (86%), Gaps = 1/74 (1%) Strand=Plus/Plus Query 79625 TGCTTTCGATGAGCTTTGATCTCATTACCTCCCGCTTACTAAACGGGTGCTCT-ACCAAT 79683 |||| ||| |||| |||| |||| ||||||||||||||||||||||||||| ||||| Sbjct 16343539 TGCTCTCGTTGAGAGTTGAACTCAAGACCTCCCGCTTACTAAACGGGTGCTCTAACCAAC 16343598 Query 79684 TGAGCTACGAAAGC 79697 |||||||||| ||| Sbjct 16343599 TGAGCTACGAGAGC 16343612 >seq15 Length=20964703 Score = 89.7 bits (98), Expect = 6e-13 Identities = 66/76 (87%), Gaps = 1/76 (1%) Strand=Plus/Minus Query 79625 TGCTTTCGATGAGCTTTGATCTCATTACCTCCCGCTTACTAAACGGGTGCTCT-ACCAAT 79683 ||||||| |||| |||| |||| ||||||||||||||||||||||||||| ||||| Sbjct 19607461 TGCTTTCATTGAGAGTTGAACTCAAGACCTCCCGCTTACTAAACGGGTGCTCTAACCAAC 19607402 Query 79684 TGAGCTACGAAAGCAA 79699 ||||||| |||||||| Sbjct 19607401 TGAGCTATGAAAGCAA 19607386 >seq13 Length=17820680 Score = 89.7 bits (98), Expect = 6e-13 Identities = 66/76 (87%), Gaps = 1/76 (1%) Strand=Plus/Minus Query 79625 TGCTTTCGATGAGCTTTGATCTCATTACCTCCCGCTTACTAAACGGGTGCTCT-ACCAAT 79683 ||||||| |||| |||| |||| ||||||||||||||||||||||||||| ||||| Sbjct 4464143 TGCTTTCATTGAGAGTTGAACTCAAGACCTCCCGCTTACTAAACGGGTGCTCTAACCAAC 4464084 Query 79684 TGAGCTACGAAAGCAA 79699 ||||||| |||||||| Sbjct 4464083 TGAGCTATGAAAGCAA 4464068 Score = 86.0 bits (94), Expect = 7e-12 Identities = 64/74 (86%), Gaps = 1/74 (1%) Strand=Plus/Plus Query 79625 TGCTTTCGATGAGCTTTGATCTCATTACCTCCCGCTTACTAAACGGGTGCTCT-ACCAAT 79683 ||||||| |||| |||| |||| ||||||||||||||||||||||||||| ||||| Sbjct 1393417 TGCTTTCATTGAGAGTTGAACTCAAGACCTCCCGCTTACTAAACGGGTGCTCTAACCAAC 1393476 Query 79684 TGAGCTACGAAAGC 79697 ||||||| |||||| Sbjct 1393477 TGAGCTATGAAAGC 1393490 >seq12 Length=19065701 Score = 89.7 bits (98), Expect = 6e-13 Identities = 66/76 (87%), Gaps = 1/76 (1%) Strand=Plus/Minus Query 79624 CTGCTTTCGATGAGCTTTGATCTCATTACCTCCCGCTTACTAAACGGGTGCTCT-ACCAA 79682 |||||||| |||| |||| |||| ||||||||||||||||||||||||||| ||||| Sbjct 18925534 CTGCTTTCATTGAGAGTTGAACTCAAGACCTCCCGCTTACTAAACGGGTGCTCTAACCAA 18925475 Query 79683 TTGAGCTACGAAAGCA 79698 ||||||| ||||||| Sbjct 18925474 CTGAGCTATGAAAGCA 18925459 >seq6 Length=33111450 Score = 89.7 bits (98), Expect = 6e-13 Identities = 66/76 (87%), Gaps = 1/76 (1%) Strand=Plus/Plus Query 79625 TGCTTTCGATGAGCTTTGATCTCATTACCTCCCGCTTACTAAACGGGTGCTCT-ACCAAT 79683 ||||||| |||| |||| |||| ||||||||||||||||||||||||||| ||||| Sbjct 6188784 TGCTTTCATTGAGAGTTGAACTCAAGACCTCCCGCTTACTAAACGGGTGCTCTAACCAAC 6188843 Query 79684 TGAGCTACGAAAGCAA 79699 ||||||| |||||||| Sbjct 6188844 TGAGCTATGAAAGCAA 6188859 >seq4 Length=27333975 Score = 87.8 bits (96), Expect = 2e-12 Identities = 65/75 (87%), Gaps = 1/75 (1%) Strand=Plus/Minus Query 79625 TGCTTTCGATGAGCTTTGATCTCATTACCTCCCGCTTACTAAACGGGTGCTCT-ACCAAT 79683 ||||||| |||| |||| |||| ||||||||||||||||||||||||||| ||||| Sbjct 11042939 TGCTTTCATTGAGAGTTGAACTCAAGACCTCCCGCTTACTAAACGGGTGCTCTAACCAAC 11042880 Query 79684 TGAGCTACGAAAGCA 79698 ||||||| ||||||| Sbjct 11042879 TGAGCTATGAAAGCA 11042865 >seq20 Length=21988590 Score = 86.0 bits (94), Expect = 7e-12 Identities = 64/74 (86%), Gaps = 1/74 (1%) Strand=Plus/Plus Query 79625 TGCTTTCGATGAGCTTTGATCTCATTACCTCCCGCTTACTAAACGGGTGCTCT-ACCAAT 79683 ||||||| |||| |||| |||| ||||||||||||||||||||||||||| ||||| Sbjct 4972352 TGCTTTCATTGAGAGTTGAACTCAAGACCTCCCGCTTACTAAACGGGTGCTCTAACCAAC 4972411 Query 79684 TGAGCTACGAAAGC 79697 ||||||| |||||| Sbjct 4972412 TGAGCTATGAAAGC 4972425 >seq19 Length=18159812 Score = 86.0 bits (94), Expect = 7e-12 Identities = 64/74 (86%), Gaps = 1/74 (1%) Strand=Plus/Plus Query 79625 TGCTTTCGATGAGCTTTGATCTCATTACCTCCCGCTTACTAAACGGGTGCTCT-ACCAAT 79683 |||| ||| |||| |||| |||| ||||||||||||||||||||||||||| ||||| Sbjct 591077 TGCTCTCGTTGAGAGTTGAACTCAAGACCTCCCGCTTACTAAACGGGTGCTCTAACCAAC 591136 Query 79684 TGAGCTACGAAAGC 79697 |||||||||| ||| Sbjct 591137 TGAGCTACGAGAGC 591150 >seq17 Length=21299880 Score = 86.0 bits (94), Expect = 7e-12 Identities = 64/74 (86%), Gaps = 1/74 (1%) Strand=Plus/Plus Query 79625 TGCTTTCGATGAGCTTTGATCTCATTACCTCCCGCTTACTAAACGGGTGCTCT-ACCAAT 79683 ||||||| |||| |||| |||| ||||||||||||||||||||||||||| ||||| Sbjct 5885085 TGCTTTCATTGAGAGTTGAACTCAAGACCTCCCGCTTACTAAACGGGTGCTCTAACCAAC 5885144 Query 79684 TGAGCTACGAAAGC 79697 ||||||| |||||| Sbjct 5885145 TGAGCTATGAAAGC 5885158 Score = 86.0 bits (94), Expect = 7e-12 Identities = 64/74 (86%), Gaps = 1/74 (1%) Strand=Plus/Plus Query 79625 TGCTTTCGATGAGCTTTGATCTCATTACCTCCCGCTTACTAAACGGGTGCTCT-ACCAAT 79683 ||||||| |||| |||| |||| ||||||||||||||||||||||||||| ||||| Sbjct 5945647 TGCTTTCATTGAGAGTTGAACTCAAGACCTCCCGCTTACTAAACGGGTGCTCTAACCAAC 5945706 Query 79684 TGAGCTACGAAAGC 79697 ||||||| |||||| Sbjct 5945707 TGAGCTATGAAAGC 5945720 >seq16 Length=20786881 Score = 86.0 bits (94), Expect = 7e-12 Identities = 64/74 (86%), Gaps = 1/74 (1%) Strand=Plus/Plus Query 79625 TGCTTTCGATGAGCTTTGATCTCATTACCTCCCGCTTACTAAACGGGTGCTCT-ACCAAT 79683 ||||||| |||| |||| |||| ||||||||||||||||||||||||||| ||||| Sbjct 17569300 TGCTTTCATTGAGAGTTGAACTCAAGACCTCCCGCTTACTAAACGGGTGCTCTAACCAAC 17569359 Query 79684 TGAGCTACGAAAGC 79697 ||||||| |||||| Sbjct 17569360 TGAGCTATGAAAGC 17569373 >seq7 Length=19782170 Score = 86.0 bits (94), Expect = 7e-12 Identities = 64/74 (86%), Gaps = 1/74 (1%) Strand=Plus/Minus Query 79625 TGCTTTCGATGAGCTTTGATCTCATTACCTCCCGCTTACTAAACGGGTGCTCT-ACCAAT 79683 ||||||| |||| |||| |||| ||||||||||||||||||||||||||| ||||| Sbjct 9491174 TGCTTTCATTGAGAGTTGAACTCAAGACCTCCCGCTTACTAAACGGGTGCTCTAACCAAC 9491115 Query 79684 TGAGCTACGAAAGC 79697 ||||||| |||||| Sbjct 9491114 TGAGCTATGAAAGC 9491101 >seq1 Length=36457581 Score = 86.0 bits (94), Expect = 7e-12 Identities = 64/74 (86%), Gaps = 1/74 (1%) Strand=Plus/Minus Query 79625 TGCTTTCGATGAGCTTTGATCTCATTACCTCCCGCTTACTAAACGGGTGCTCT-ACCAAT 79683 |||| ||| |||| |||| |||| ||||||||||||||||||||||||||| ||||| Sbjct 35216539 TGCTCTCGTTGAGAGTTGAACTCAAGACCTCCCGCTTACTAAACGGGTGCTCTAACCAAC 35216480 Query 79684 TGAGCTACGAAAGC 79697 |||||||||| ||| Sbjct 35216479 TGAGCTACGAGAGC 35216466 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 547123157965400