Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lupinus_20angustifolius_20[refseq_20GCF_5F001865875.1_202016-11-16] 13,573 sequences; 609,203,021 total letters Query= NC_029996.1 Length=134272 Score E Sequences producing significant alignments: (Bits) Value seq19 100 2e-16 seq4 93.3 4e-14 seq9 86.0 5e-12 seq17 84.2 2e-11 seq6 84.2 2e-11 seq3 84.2 2e-11 >seq19 Length=18159812 Score = 100 bits (110), Expect = 2e-16 Identities = 144/203 (71%), Gaps = 0/203 (0%) Strand=Plus/Minus Query 39082 TGTAGCGTGCTCTCTTTTTGTATATTATAATCGGCAAGTGTTCGTTCGTCATCAAGCTGT 39141 || || ||| ||| || || || ||||||||||| | ||||| |||| |||||||| Sbjct 4941092 TGAAGAGTGGACTCCTTCTGGATGTTATAATCGGCCAAAGTTCGACCGTCCTCAAGCTGC 4941033 Query 39142 TTGCCCGCAAATATAAGACGCTGCTGGTCGGTGGGCACGCTCTCTTTGTCCATGATTTTC 39201 ||||| ||||| ||||| | |||||| |||| || | | ||| ||||| ||| || Sbjct 4941032 TTGCCAGCAAAGATAAGCCTCTGCTGATCGGGTGGGATACCCTCCTTGTCTTGGATCTTT 4940973 Query 39202 TGTTTGAGCGTCGCCACCGTATCGCTCGACTCCACGTCCACCGTGATACTTTTTCCCGTC 39261 ||||| | | | || ||| |||||| || | ||||| | ||||| ||| Sbjct 4940972 GCTTTGACATTGTCAATGGTGTCGGAACTCTCCACCTCAAGGGTGATGGTCTTTCCGGTC 4940913 Query 39262 AGCGTTTTAACAAAGATTTGCAT 39284 | || ||||||||||||||||| Sbjct 4940912 AAGGTCTTAACAAAGATTTGCAT 4940890 Score = 82.4 bits (90), Expect = 7e-11 Identities = 147/215 (68%), Gaps = 0/215 (0%) Strand=Plus/Minus Query 39070 CGTAACACCAAATGTAGCGTGCTCTCTTTTTGTATATTATAATCGGCAAGTGTTCGTTCG 39129 || || || | ||| || ||| ||| || || || |||||||| || | ||||| | Sbjct 4941560 CGCAAGACAAGATGGAGGGTGGACTCCTTCTGGATGTTATAATCAGCCAAAGTTCGACCA 4941501 Query 39130 TCATCAAGCTGTTTGCCCGCAAATATAAGACGCTGCTGGTCGGTGGGCACGCTCTCTTTG 39189 || |||||||| ||||| ||||| ||||| | |||||| || | || | | ||| ||| Sbjct 4941500 TCCTCAAGCTGCTTGCCAGCAAAGATAAGCCTCTGCTGATCTGGTGGAATACCCTCCTTG 4941441 Query 39190 TCCATGATTTTCTGTTTGAGCGTCGCCACCGTATCGCTCGACTCCACGTCCACCGTGATA 39249 || ||| || ||||| | | | || || |||||| || | ||||| Sbjct 4941440 TCTTGGATCTTTGCTTTGACATTGTCGATGGTGTCAGAACTCTCCACCTCAAGGGTGATT 4941381 Query 39250 CTTTTTCCCGTCAGCGTTTTAACAAAGATTTGCAT 39284 | ||||| |||| || || |||||||||||||| Sbjct 4941380 GTCTTTCCAGTCAAGGTCTTCACAAAGATTTGCAT 4941346 >seq4 Length=27333975 Score = 93.3 bits (102), Expect = 4e-14 Identities = 96/126 (76%), Gaps = 0/126 (0%) Strand=Plus/Minus Query 39075 CACCAAATGTAGCGTGCTCTCTTTTTGTATATTATAATCGGCAAGTGTTCGTTCGTCATC 39134 ||||||||| || ||| ||| || || || |||||||||||||| ||||| | || || Sbjct 3993748 CACCAAATGGAGAGTGGACTCCTTCTGGATGTTATAATCGGCAAGGGTTCGGCCATCCTC 3993689 Query 39135 AAGCTGTTTGCCCGCAAATATAAGACGCTGCTGGTCGGTGGGCACGCTCTCTTTGTCCAT 39194 ||||| || || ||||| ||||| | ||||||||| | || | || ||| |||||| Sbjct 3993688 GAGCTGCTTTCCAGCAAAGATAAGCCTCTGCTGGTCTGGAGGAATGCCCTCCTTGTCCTG 3993629 Query 39195 GATTTT 39200 ||| || Sbjct 3993628 GATCTT 3993623 >seq9 Length=21753712 Score = 86.0 bits (94), Expect = 5e-12 Identities = 89/114 (78%), Gaps = 2/114 (2%) Strand=Plus/Plus Query 39058 CCTCCTCTTAAGCGT-AACACCAAATGTAGCGTGCTCTCTTTTTGTATATTATAATCGGC 39116 ||||| || |||| | || |||||||| || ||| || |||||||||||||||||||| Sbjct 2445971 CCTCCCCT-AAGCCTCAAGACCAAATGAAGTGTGGATTCCTTTTGTATATTATAATCGGC 2446029 Query 39117 AAGTGTTCGTTCGTCATCAAGCTGTTTGCCCGCAAATATAAGACGCTGCTGGTC 39170 ||| || ||| | || || ||||| || || ||||| || || | |||||||| Sbjct 2446030 AAGAGTGCGTCCATCTTCCAGCTGCTTACCAGCAAAAATCAGCCTTTGCTGGTC 2446083 >seq17 Length=21299880 Score = 84.2 bits (92), Expect = 2e-11 Identities = 136/193 (70%), Gaps = 2/193 (1%) Strand=Plus/Minus Query 39094 TCTTTTTGTATATTATAATCGGCAAGTGTTCGTTCGTCATCAAGCTGTTTGCCCGCAAAT 39153 || || || || || || ||||| || || || |||| ||||||||||| || || || Sbjct 4985005 TCCTTCTGGATGTTGTAGTCGGCGAGGGTGCGACCGTCTTCAAGCTGTTTTCCGGCGAAG 4984946 Query 39154 ATAAGACGCTGCTGGT-CGGTGGGCACGCTCTCTTTGTCCATGATTTTCTGTTTGAGCGT 39212 || ||||||||||||| ||||||| | | || ||||| ||| || |||| | Sbjct 4984945 ATGAGACGCTGCTGGTCCGGTGGG-ATTCCTTCCTTGTCTTGGATCTTGGCCTTGACATT 4984887 Query 39213 CGCCACCGTATCGCTCGACTCCACGTCCACCGTGATACTTTTTCCCGTCAGCGTTTTAAC 39272 | | |||||| || || || || | ||||| |||| ||||| || ||||| || Sbjct 4984886 GTCGATGGTATCGGAGGATTCAACTTCGAGGGTGATGGTTTTCCCCGTTAGGGTTTTCAC 4984827 Query 39273 AAAGATTTGCATC 39285 ||||| |||||| Sbjct 4984826 GAAGATCTGCATC 4984814 >seq6 Length=33111450 Score = 84.2 bits (92), Expect = 2e-11 Identities = 137/195 (70%), Gaps = 2/195 (1%) Strand=Plus/Minus Query 39094 TCTTTTTGTATATTATAATCGGCAAGTGTTCGTTCGTCATCAAGCTGTTTGCCCGCAAAT 39153 || || || ||||| |||||||| || || || |||| ||||| || || || || || Sbjct 5099836 TCCTTCTGGATATTGTAATCGGCGAGGGTGCGGCCGTCCTCAAGTTGCTTTCCGGCGAAG 5099777 Query 39154 ATAAGACGCTGCTGGT-CGGTGGGCACGCTCTCTTTGTCCATGATTTTCTGTTTGAGCGT 39212 || || |||||||||| ||||||| | | || |||||| ||| || |||| | Sbjct 5099776 ATCAGTCGCTGCTGGTCCGGTGGG-ATTCCTTCCTTGTCCTGGATCTTGGCCTTGACATT 5099718 Query 39213 CGCCACCGTATCGCTCGACTCCACGTCCACCGTGATACTTTTTCCCGTCAGCGTTTTAAC 39272 | | || || ||||| || || | || || |||| ||||| || ||||| || Sbjct 5099717 GTCGATGGTGTCAGAGGACTCAACCTCGAGGGTTATGGTTTTACCCGTTAGGGTTTTCAC 5099658 Query 39273 AAAGATTTGCATCTT 39287 |||||| |||||||| Sbjct 5099657 AAAGATCTGCATCTT 5099643 >seq3 Length=30153019 Score = 84.2 bits (92), Expect = 2e-11 Identities = 136/193 (70%), Gaps = 2/193 (1%) Strand=Plus/Plus Query 39094 TCTTTTTGTATATTATAATCGGCAAGTGTTCGTTCGTCATCAAGCTGTTTGCCCGCAAAT 39153 || || || || || || ||||| || || || |||| ||||||||||| || || || Sbjct 15142529 TCCTTCTGGATGTTGTAGTCGGCGAGGGTGCGACCGTCTTCAAGCTGTTTTCCGGCGAAG 15142588 Query 39154 ATAAGACGCTGCTGGT-CGGTGGGCACGCTCTCTTTGTCCATGATTTTCTGTTTGAGCGT 39212 || ||||||||||||| ||||||| | | || ||||| ||| || |||| | Sbjct 15142589 ATGAGACGCTGCTGGTCCGGTGGG-ATTCCTTCCTTGTCTTGGATCTTGGCCTTGACATT 15142647 Query 39213 CGCCACCGTATCGCTCGACTCCACGTCCACCGTGATACTTTTTCCCGTCAGCGTTTTAAC 39272 | | |||||| || || || || | ||||| |||| ||||| || ||||| || Sbjct 15142648 GTCGATGGTATCGGAGGATTCAACTTCGAGGGTGATGGTTTTCCCCGTTAGGGTTTTCAC 15142707 Query 39273 AAAGATTTGCATC 39285 ||||| |||||| Sbjct 15142708 GAAGATCTGCATC 15142720 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 429474544164149