Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Lupinus_20angustifolius_20[refseq_20GCF_5F001865875.1_202016-11-16]
13,573 sequences; 609,203,021 total letters
Query= NC_030656.1
Length=133492
Score E
Sequences producing significant alignments: (Bits) Value
seq11 178 1e-39
seq9 178 1e-39
>seq11
Length=35963958
Score = 178 bits (196), Expect = 1e-39
Identities = 400/594 (67%), Gaps = 8/594 (1%)
Strand=Plus/Minus
Query 4540 ACAATAAACACGCAAAATCACAATGCAAACCTTCGTCTCTGCTA-ATCAGTTCGTTAGAA 4598
|||| || || || ||||||||||| | ||||| |||| || | |||| ||||| ||
Sbjct 2850741 ACAACAAGCAAGCGAAATCACAATGAAGCCCTTCATCTC-GCGATATCAACTCGTTTGAG 2850683
Query 4599 AACGTTAATCCGGGCATTAAACCTCTCTTTTTAAGCCAAAATATAGCGGCAAATGACCCA 4658
|| || | ||| ||||| | ||||||||| |||||||| |||||||| || |||
Sbjct 2850682 AAGGTAAGTCCAGGCATAAGACCTCTCTTCTTAAGCCAGAATATAGCACAGAAGCTTCCA 2850623
Query 4659 GAAAAGAATATGCCTTCTACGGCGGCAAACGCTACTAATCGGGACCCGAACGAGCTGGCT 4718
|| ||||| || ||||| || |||||||| || | || |||| || ||
Sbjct 2850622 GAGAAGAAAATTCCTTCAACACAAGCAAACGCAACAAGGCGCTCAGCGAAGGA---TTCT 2850566
Query 4719 TTGTCTTTAATCCATTTTAATGCCCAGTTAGCTTTTTTCTTAACGCACGGAATTGTGTAT 4778
| | ||||| ||| ||||| | |||||| || ||| || || ||||| |
Sbjct 2850565 GAACCATCGATCCAACGTAACGCCCACTCAGCTTTCCTCGCAACACAAGGGATTGTTTCA 2850506
Query 4779 ATAGCGTTAAATAATTTACTTTTTTCAAATGGGTCTTGAATATAAGTGTCTATTAGTAGG 4838
| |||| || || |||| ||| | || | ||||| || || | || ||
Sbjct 2850505 ACCGCGTGGAACAAACGGTTTTTATCAGCCGAATCCTTGATATATGTTTCAAGAAGGAGA 2850446
Query 4839 CTATACATTTCAGAATGTATATTTTCTATAGCAATCTGAAATCCGTA-AAAGCATCTAGC 4897
|| ||||| |||||||| |||||||| |||||||| || |||||||| |||||| | ||
Sbjct 2850445 CTGTACATCTCAGAATGGATATTTTCAATAGCAATTTGGAATCCGTAGAAAGCA-CGCGC 2850387
Query 4898 TTCTGTTACTTGAACTTCGTTACAAAATCTTTCTACTAAGTTTTCGTTTACTATACCGTC 4957
|| | ||||| | ||| | ||| ||| | | | |||||| || ||||||||
Sbjct 2850386 CTCAGCGACTTGGATTTCAGTCATAAACCTTCCGGCAAGGTTTTCAAGAACGATACCGTC 2850327
Query 4958 ACTGGCTGCAAAAAACGCCAAAACATGAGATATAAAGTACTGTTCGTCAGGCTTAAGTTT 5017
| ||| || || || || | || || | ||||| ||||| | | || ||
Sbjct 2850326 AGAGGCGGCGAAGAAAGCGAGGACGTGTTTGACAAAGTGGCGTTCGCCGTCGGTGAGGTT 2850267
Query 5018 TTTCCAGTGGGGCAAATCTTTAGTTAAATCAACTTCTTCAACAGTCCAAAACGACGCTTC 5077
| ||||||| | | || | || | ||||||||| || | ||||| || || |||||
Sbjct 2850266 CTCCCAGTGGCGGACGTCCTGAGAAAGATCAACTTCCTCGGCGGTCCAGAAAGATGCTTC 2850207
Query 5078 CGCTTTTTTGTACATAGACCAAATATCAGGATACTGAATCGGAAGTATGACAAA 5131
||||| || ||||| ||| || | ||| || ||||| |||| ||| ||||
Sbjct 2850206 GGCTTTCTTATACATCTCCCAGATCTGAGGGTATTGAATTGGAAACATG-CAAA 2850154
>seq9
Length=21753712
Score = 178 bits (196), Expect = 1e-39
Identities = 392/582 (67%), Gaps = 7/582 (1%)
Strand=Plus/Plus
Query 4542 AATAAACACGCAAAATCACAATGCAAACCTTCGTCTCTGCTA-ATCAGTTCGTTAGAAAA 4600
|||||||| || ||||||||||| | ||||| |||| || | |||| ||||| || ||
Sbjct 19303914 AATAAACAAGCGAAATCACAATGAAGCCCTTCATCTC-GCGATATCAACTCGTTCGAGAA 19303972
Query 4601 CGTTAATCCGGGCATTAAACCTCTCTTTTTAAGCCAAAATATAGCGGCAAATGACCCAGA 4660
|| | ||||||||||| || | ||||||||||||||||| || || |||||
Sbjct 19303973 TGTAAGACCGGGCATTAACCCGCGTTTTTTAAGCCAAAATATCGCACAGAAGCTTCCAGA 19304032
Query 4661 AAAGAATATGCCTTCTACGGCGGCAAACGCTACTAATCGGGACCCGAACGAGCTGGCTTT 4720
|| ||||| ||||| ||| ||||| || || | || |||| || |
Sbjct 19304033 GAAAAATATTCCTTCAACGCAAGCAAAAGCAACGAGGCGTTCTGCGAAGGATTCTGAACC 19304092
Query 4721 GTCTTTAATCCATTTTAATGCCCAGTTAGCTTTTTTCTTAACGCACGGAATTGTGTATAT 4780
||| |||||| ||| ||||| | |||||| || |||| || ||||| || | ||
Sbjct 19304093 GTCG---ATCCATCGTAACGCCCATTCAGCTTTCTTTGTAACACAAGGAATGGTTTCAAT 19304149
Query 4781 AGCGTTAAATAATTTACTTTTTTCAAATGGGTCTTGAATATAAGTGTCTATTAGTAGGCT 4840
|||| |||||| |||| ||| | ||||| ||||| || || | || |||||
Sbjct 19304150 CGCGTGGAATAATCGGTTTTTATCAGCGGAGTCTTTGATATATGTTTCGAGAAGGAGGCT 19304209
Query 4841 ATACATTTCAGAATGTATATTTTCTATAGCAATCTGAAATCCGTA-AAAGCATCTAGCTT 4899
|||||| ||||| || |||||||| || || || || || ||||| |||||| | || |
Sbjct 19304210 ATACATCTCAGAGTGGATATTTTCAATGGCGATTTGGAAGCCGTAGAAAGCA-CGCGCCT 19304268
Query 4900 CTGTTACTTGAACTTCGTTACAAAATCTTTCTACTAAGTTTTCGTTTACTATACCGTCAC 4959
| | ||||||| || | || ||| | | | |||||| || || |||||
Sbjct 19304269 CAGCGACTTGAATTTGAGTCATGAACCTTCCGGCGAGGTTTTCAAGAACGATTCCGTCGG 19304328
Query 4960 TGGCTGCAAAAAACGCCAAAACATGAGATATAAAGTACTGTTCGTCAGGCTTAAGTTTTT 5019
||| || || || || | | || || |||| |||| || | || |
Sbjct 19304329 AGGCGGCGAAGAAGGCGAGGATGTGTTTGATGAAGTGGCGTTCATCGTCGGTGAGAGAAT 19304388
Query 5020 TCCAGTGGGGCAAATCTTTAGTTAAATCAACTTCTTCAACAGTCCAAAACGACGCTTCCG 5079
||| ||| | | ||||| || | ||| |||||||| | ||||| || || ||||| |
Sbjct 19304389 CCCAATGGCGAAGATCTTGAGAAAGATCGACTTCTTCGGCGGTCCAGAATGAAGCTTCGG 19304448
Query 5080 CTTTTTTGTACATAGACCAAATATCAGGATACTGAATCGGAA 5121
|||| |||||||| ||| || | ||| || || || ||||
Sbjct 19304449 CTTTCTTGTACATTTCCCAGATCTGAGGGTATTGGATTGGAA 19304490
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 426978957054809
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |