Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lupinus_20angustifolius_20[refseq_20GCF_5F001865875.1_202016-11-16] 13,573 sequences; 609,203,021 total letters Query= NC_031038.1 Length=222832 Score E Sequences producing significant alignments: (Bits) Value seq11 194 2e-44 seq9 172 8e-38 seq2896 138 2e-27 seq1 118 2e-21 >seq11 Length=35963958 Score = 194 bits (214), Expect = 2e-44 Identities = 406/601 (68%), Gaps = 8/601 (1%) Strand=Plus/Minus Query 46627 AAACATGCAAAATCACAATGAAGGCCTTCATCTCTACTAATTAATTCGTTAGAAAATGTG 46686 || || || |||||||||||||| |||||||||| || || ||||| || || || Sbjct 2850736 AAGCAAGCGAAATCACAATGAAGCCCTTCATCTCGCGATATCAACTCGTTTGAGAAGGTA 2850677 Query 46687 AGCCCAGGCATTAGTCCACGCTTTTTGAGCCAAAATATAGCCGCGAAAGATCCAGAAAAG 46746 || |||||||| || || | ||| || ||||| |||||||| ||| |||||| ||| Sbjct 2850676 AGTCCAGGCATAAGACCTCTCTTCTTAAGCCAGAATATAGCACAGAAGCTTCCAGAGAAG 2850617 Query 46747 AATATGCCTTCTACAGCCGCGAATGCGACAAGTCTCTCTCCGTAACTGGCATC---ATTA 46803 || || ||||| ||| || || || ||||| | ||| || | || || | | Sbjct 2850616 AAAATTCCTTCAACACAAGCAAACGCAACAAGGCGCTCAGCGAA---GGATTCTGAACCA 2850560 Query 46804 TGAATCCACCTTTGAGCCCAATCAGCCTTTTTCTTTACACAAGGCATTGTTTCTATAGCA 46863 | ||||| | | ||||| ||||| || || |||||||| |||||||| | || Sbjct 2850559 TCGATCCAACGTAACGCCCACTCAGCTTTCCTCGCAACACAAGGGATTGTTTCAACCGCG 2850500 Query 46864 TTAAAGAGAAAGtttttttCATCACTATCTTTAACATATGTATCTATTAAAAGACTATAC 46923 | || | | |||||| ||| | ||| || | |||||| || | | ||||| ||| Sbjct 2850499 TGGAACAAACGGTTTTTATCAGCCGAATCCTTGATATATGTTTCAAGAAGGAGACTGTAC 2850440 Query 46924 ATTTCTGAATGAATGTTTTCAATAGCCATCTGAAATCCGTAAAAACATCTTGCTTCAGTA 46983 || || ||||| || ||||||||||| || || |||||||| ||| | || |||| Sbjct 2850439 ATCTCAGAATGGATATTTTCAATAGCAATTTGGAATCCGTAGAAAGCACGCGCCTCAGCG 2850380 Query 46984 ATCTGTACCTCTGTACAAAATCGTTCAGACAA-ATTCTCATTCACTATTCCATCACTAGC 47042 | || | || || || || | ||| | ||| || ||| || || || ||| || Sbjct 2850379 ACTTGGATTTCAGT-CATAAACCTTCCGGCAAGGTTTTCAAGAACGATACCGTCAGAGGC 2850321 Query 47043 AGCAAAAAATGCCAATACATGTTTAATAAAATATTTTTCATCGGTAGTCAGTTTATTCCA 47102 || || || || | || ||||| | ||| | ||| || || || || | ||| Sbjct 2850320 GGCGAAGAAAGCGAGGACGTGTTTGACAAAGTGGCGTTCGCCGTCGGTGAGGTTCTCCCA 2850261 Query 47103 GTCATTGATATCTTTTGATATATCTACTTCTTCAGCTGTCCAGAATGACGCCTCTGCTTT 47162 || || || | || | ||| ||||| || || |||||||| || || || ||||| Sbjct 2850260 GTGGCGGACGTCCTGAGAAAGATCAACTTCCTCGGCGGTCCAGAAAGATGCTTCGGCTTT 2850201 Query 47163 TTTATACATATTCCATATATCACGATATTGGATCGGAAAAATAACAAATCTATTTGGATT 47222 |||||||| | ||| || | | | ||||| || ||||| || ||| | | |||||| Sbjct 2850200 CTTATACATCTCCCAGATCTGAGGGTATTGAATTGGAAACATGCAAAAACGGTCTGGATT 2850141 Query 47223 T 47223 | Sbjct 2850140 T 2850140 Score = 109 bits (120), Expect = 8e-19 Identities = 166/231 (72%), Gaps = 8/231 (3%) Strand=Plus/Minus Query 76994 GTTCCTGCATTAAACAATGTAGGAGATGCATGAGTGAACCATTTTTCAGAAAGTAGATTG 77053 || || ||||| |||| |||||||||||||||||||||||| | | || | |||| | Sbjct 31406441 GTCCCGGCATTGAACAGAGTAGGAGATGCATGAGTGAACCATCTCTGTGACATCAGATGG 31406382 Query 77054 TATGTTTCAATAACTGCTTCTA---TATCCCATTGATGAATTCCTACAGCGACACGCATC 77110 ||||||| | | | | |||| ||||| ||| |||||||| |||| || | |||| Sbjct 31406381 TATGTTTTGACAGCAGAATCTATGTTATCC--TTG-TGAATTCCAACAGAAACCCTCATC 31406325 Query 77111 AACATATGCTGAGGTCGTTCTACAGTCTTATTATT-TATTTTCAACAAGTATGATTTTTC 77169 ||||| |||||||||| ||| ||| ||| | || | ||||| | ||| || | || Sbjct 31406324 AACATGTGCTGAGGTCTTTCAACA-ACTTGTCCTTCAACCTTCAAGAGGTAGGACCTCTC 31406266 Query 77170 CAAAGTTTTAAAACCAAAATAGTTGTATGAAAAGTCTCTTTCGTAAATAAT 77220 | ||||| |||||||| || | || |||||| || || || || || Sbjct 31406265 AAGGGTTTTGAAACCAAAGTAATCATAGTCAAAGTCCCTATCATATATGAT 31406215 Score = 96.9 bits (106), Expect = 5e-15 Identities = 143/203 (70%), Gaps = 0/203 (0%) Strand=Plus/Minus Query 76754 CCTCCCTGATCTATATATCTGGCAGTGTTATTATAAACTCTCAACATTGGAATAATGCCG 76813 || || ||||| | ||| | ||||| | |||| |||| | || |||||||| ||| || Sbjct 31406824 CCACCTTGATCAACATAGCGAGCAGTATCATTAAAAACACGCAGCATTGGAACAATACCA 31406765 Query 76814 TTAGATGTACCATTTGTTCCAGAAATATAACTTCCACATGCACGAATATTACTAATAGAT 76873 || ||||| ||||| ||||| || ||||| || || || || || || ||| Sbjct 31406764 TTGGATGTCCCATTAGTTCCCCGGATGTAACTGCCTGTGGCTCGGATGTTGTGAACAGAA 31406705 Query 76874 AGGCCTATTCCTCCTGCCATTTTAGAGATTAGAGCACAGCGTTTCAATGTGTCATAGATG 76933 | || |||||||| || ||| ||| |||||| ||||| || ||||| || Sbjct 31406704 ACACCAATTCCTCCAGCTGATTTGCTGATCGCAGCACACTCCTTCAAAGTATCATATATT 31406645 Query 76934 CCCTCTATACTATCATCCATCAT 76956 ||||||||||||||||| |||| Sbjct 31406644 CCCTCTATACTATCATCTTTCAT 31406622 >seq9 Length=21753712 Score = 172 bits (190), Expect = 8e-38 Identities = 392/587 (67%), Gaps = 16/587 (3%) Strand=Plus/Plus Query 46626 TAAACATGCAAAATCACAATGAAGGCCTTCATCTCTACTAATTAATTCGTTAGAAAATGT 46685 |||||| || |||||||||||||| |||||||||| || || ||||| || ||||| Sbjct 19303916 TAAACAAGCGAAATCACAATGAAGCCCTTCATCTCGCGATATCAACTCGTTCGAGAATGT 19303975 Query 46686 GAGCCCAGGCATTAGTCCACGCTTTTTGAGCCAAAATATAGCCGCGAAAGATCCAGAAAA 46745 || || ||||||| || || ||||| ||||||||||| || ||| |||||| || Sbjct 19303976 AAGACCGGGCATTAACCCGCGTTTTTTAAGCCAAAATATCGCACAGAAGCTTCCAGAGAA 19304035 Query 46746 GAATATGCCTTCTACAGCCGCGAATGCGACAAGTCTCTCTCCGTAACTGGCATCATTATG 46805 ||||| ||||| || || || || || || | ||| || | || ||| || Sbjct 19304036 AAATATTCCTTCAACGCAAGCAAAAGCAACGAGGCGTTCTGCGAA---GG----ATTCTG 19304088 Query 46806 A-------ATCCACCTTTGAGCCCAATCAGCCTTTTTCTTTACACAAGGCATTGTTTCTA 46858 | ||||| | | ||||| ||||| || || | |||||||| || ||||| | Sbjct 19304089 AACCGTCGATCCATCGTAACGCCCATTCAGCTTTCTTTGTAACACAAGGAATGGTTTCAA 19304148 Query 46859 TAGCATTAAAGAGAAAGtttttttCATCACTATCTTTAACATATGTATCTATTAAAAGAC 46918 | || | || | |||||| ||| | ||||| | |||||| || | | || | Sbjct 19304149 TCGCGTGGAATAATCGGTTTTTATCAGCGGAGTCTTTGATATATGTTTCGAGAAGGAGGC 19304208 Query 46919 TATACATTTCTGAATGAATGTTTTCAATAGCCATCTGAAATCCGTAAAAACATCTTGCTT 46978 ||||||| || || || || |||||||| || || || || ||||| ||| | || | Sbjct 19304209 TATACATCTCAGAGTGGATATTTTCAATGGCGATTTGGAAGCCGTAGAAAGCACGCGCCT 19304268 Query 46979 CAGTAATCTGTACCTCTGTACAAAATCGTTCAGAC-AAATTCTCATTCACTATTCCATCA 47037 ||| | || | | || || | | ||| | | | || ||| || ||||| || Sbjct 19304269 CAGCGACTTGAATTTGAGT-CATGAACCTTCCGGCGAGGTTTTCAAGAACGATTCCGTCG 19304327 Query 47038 CTAGCAGCAAAAAATGCCAATACATGTTTAATAAAATATTTTTCATCGGTAGTCAGTTTA 47097 || || || || || | | ||||| || || | ||||||| || || | Sbjct 19304328 GAGGCGGCGAAGAAGGCGAGGATGTGTTTGATGAAGTGGCGTTCATCGTCGGTGAGAGAA 19304387 Query 47098 TTCCAGTCATTGATATCTTTTGATATATCTACTTCTTCAGCTGTCCAGAATGACGCCTCT 47157 | ||| | | ||||| || | ||| |||||||| || ||||||||||| || || Sbjct 19304388 TCCCAATGGCGAAGATCTTGAGAAAGATCGACTTCTTCGGCGGTCCAGAATGAAGCTTCG 19304447 Query 47158 GCTTTTTTATACATATTCCATATATCACGATATTGGATCGGAAAAAT 47204 ||||| || ||||| | ||| || | | | |||||||| ||||| || Sbjct 19304448 GCTTTCTTGTACATTTCCCAGATCTGAGGGTATTGGATTGGAAACAT 19304494 >seq2896 Length=25968 Score = 138 bits (152), Expect = 2e-27 Identities = 169/231 (73%), Gaps = 0/231 (0%) Strand=Plus/Minus Query 76754 CCTCCCTGATCTATATATCTGGCAGTGTTATTATAAACTCTCAACATTGGAATAATGCCG 76813 || || ||||| | ||| | ||||| | ||| | || | || ||||||||||||||| Sbjct 4778 CCACCTTGATCAACATAGCGCGCAGTATCATTGAACACACGCAGCATTGGAATAATGCCA 4719 Query 76814 TTAGATGTACCATTTGTTCCAGAAATATAACTTCCACATGCACGAATATTACTAATAGAT 76873 || ||||| |||||||| ||| ||| ||||| || ||||||||||| || ||| Sbjct 4718 TTGGATGTCCCATTTGTCCCACGAATGTAACTGCCTGTGGCACGAATATTGTGAACAGAG 4659 Query 76874 AGGCCTATTCCTCCTGCCATTTTAGAGATTAGAGCACAGCGTTTCAATGTGTCATAGATG 76933 | || |||||||| || |||| ||| | |||||| |||||| || ||||| || Sbjct 4658 ACACCAATTCCTCCAGCTGATTTACTGATGACAGCACACTCTTTCAAAGTTTCATATATA 4599 Query 76934 CCCTCTATACTATCATCCATCATGTTAAGAAGAAAACAGCTAGACATTTGA 76984 ||||||||||||||||| ||||| | ||| || || ||| ||| ||| Sbjct 4598 CCCTCTATACTATCATCTTTCATGCACACAAGGAAGCAACTACTCATCTGA 4548 Score = 84.2 bits (92), Expect = 3e-11 Identities = 139/198 (70%), Gaps = 2/198 (1%) Strand=Plus/Minus Query 76994 GTTCCTGCATTAAACAATGTAGGAGATGCATGAGTGAACCATTTTTCAGAAAGTAGATTG 77053 ||||||||||| || | || || |||||||| ||||||||| || || | | | | Sbjct 4445 GTTCCTGCATTGAAAAGAGTGGGTGATGCATGGGTGAACCATCGTTGGGACATCATGTGG 4386 Query 77054 TATGTTTCAATAACTGCTTCTATATCC-CATTGATGAATTCCTACAGCGACACGCATCAA 77112 || ||| || | | | ||||| || | ||| |||||||| ||||| || | ||||| Sbjct 4385 TAAGTTCTAAGAGCAGAGTCTATGTCATCCTTG-TGAATTCCAACAGCAACCCTCATCAG 4327 Query 77113 CATATGCTGAGGTCGTTCTACAGTCTTATTATTTATTTTCAACAAGTATGATTTTTCCAA 77172 |||||||||||| | ||| ||| ||| | | |||| | || || | || | Sbjct 4326 CATATGCTGAGGCCTTTCCACAACCTTTCCTTGAACCTTCAGGAGATAGGACCTCTCAAG 4267 Query 77173 AGTTTTAAAACCAAAATA 77190 |||||| ||||||||||| Sbjct 4266 AGTTTTGAAACCAAAATA 4249 >seq1 Length=36457581 Score = 118 bits (130), Expect = 2e-21 Identities = 148/203 (73%), Gaps = 0/203 (0%) Strand=Plus/Plus Query 76754 CCTCCCTGATCTATATATCTGGCAGTGTTATTATAAACTCTCAACATTGGAATAATGCCG 76813 || |||||||| | ||| | |||||| | ||| | || | || |||||||| ||| || Sbjct 33689080 CCACCCTGATCAACATAGCGGGCAGTATCATTGAACACACGCAGCATTGGAACAATACCA 33689139 Query 76814 TTAGATGTACCATTTGTTCCAGAAATATAACTTCCACATGCACGAATATTACTAATAGAT 76873 || ||||| ||||| |||||| ||| ||||| || |||||||| || || ||| Sbjct 33689140 TTGGATGTCCCATTAGTTCCACGAATGTAACTCCCTGTGGCACGAATGTTGTGAACAGAA 33689199 Query 76874 AGGCCTATTCCTCCTGCCATTTTAGAGATTAGAGCACAGCGTTTCAATGTGTCATAGATG 76933 | || |||||||| || ||| |||| |||||| ||||| || ||||| || Sbjct 33689200 ACACCAATTCCTCCAGCTGATTTGCTGATTGCAGCACACTCCTTCAAAGTATCATATATT 33689259 Query 76934 CCCTCTATACTATCATCCATCAT 76956 ||||||||||||||||| |||| Sbjct 33689260 CCCTCTATACTATCATCTTTCAT 33689282 Score = 111 bits (122), Expect = 2e-19 Identities = 165/229 (72%), Gaps = 4/229 (2%) Strand=Plus/Plus Query 76994 GTTCCTGCATTAAACAATGTAGGAGATGCATGAGTGAACCATTTTTCAGAAAGTAGATTG 77053 ||||| ||||| || | |||||||||||||||||||||||| | | ||| | ||| | | Sbjct 33689444 GTTCCGGCATTGAATAGAGTAGGAGATGCATGAGTGAACCATCTCTGAGACATTAGGTGG 33689503 Query 77054 TATGTTTCAATAACTGCTTCTATATC-CCATTGATGAATTCCTACAGCGACACGCATCAA 77112 || |||| | | | | || || || | ||| |||||||| |||| || | |||||| Sbjct 33689504 TAAGTTTTGACAGCAGAATCAATGTCATCCTTG-TGAATTCCAACAGAAACCCTCATCAA 33689562 Query 77113 CATATGCTGAGGTCGTTCTACAGTCTTATTATT-TATTTTCAACAAGTATGATTTTTCCA 77171 ||| |||||||||| ||| ||| ||| | || | ||||||| ||| || | || | Sbjct 33689563 CATGTGCTGAGGTCTTTCAACA-ACTTTTCCTTCAACCTTCAACAGGTAGGACCTCTCAA 33689621 Query 77172 AAGTTTTAAAACCAAAATAGTTGTATGAAAAGTCTCTTTCGTAAATAAT 77220 ||||| |||||||| || | || |||||| || || || || || Sbjct 33689622 GGGTTTTGAAACCAAAGTAATCATAGTCAAAGTCCCTATCATATATGAT 33689670 Score = 87.8 bits (96), Expect = 3e-12 Identities = 113/156 (72%), Gaps = 0/156 (0%) Strand=Plus/Plus Query 76492 CTCTCTTTCATATTGTGTATATAACCGTTCAAATTCATCTCCCCAAACATCATCCAAACC 76551 |||||||||||| | | || | | |||||||| || |||||| ||| ||||||| Sbjct 33688607 CTCTCTTTCATACCGAATGTACAGCTTCTCAAATTCTTCACCCCAACAATCTGCCAAACC 33688666 Query 76552 AGGACATTCATTCGGACACATCAATGACCACTCACCATCTTCCTTAACCCGTTTCATAAA 76611 || |||||| || || | ||| ||||| | |||| || ||||| || |||||| Sbjct 33688667 TGGTGCTTCATTGGGGCAAAACAAAGACCATTTTCCATTACTCTGAACCCTTTCCATAAA 33688726 Query 76612 GAGATCAGGTATCCATAGAGCAATAAATAGATCTCG 76647 ||||||||| | ||| || ||| ||| | |||||| Sbjct 33688727 GAGATCAGGCACCCAAAGGGCATAAAACAAATCTCG 33688762 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 712813441767360